RNA–Protein interactions for RNA: ENST00000477377.1

COMMD6-209, Transcript of COMM domain containing 6, humanhuman

TSL 3

Gene COMMD6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-209ENST00000477377 PMS2P5A8MQ11 134 aa11.42□□□□□ -0.58
COMMD6-209ENST00000477377 WRBO00258 174 aa11.42□□□□□ -0.58
COMMD6-209ENST00000477377 LYRM1O43325 122 aa11.42□□□□□ -0.58
COMMD6-209ENST00000477377 SPRY2O43597 315 aa11.42□□□□□ -0.58
COMMD6-209ENST00000477377 SCGB2A1O75556 95 aa11.42□□□□□ -0.58
COMMD6-209ENST00000477377 MED6O75586 246 aa11.42□□□□□ -0.58
COMMD6-209ENST00000477377 PAX9P55771 341 aa11.42□□□□□ -0.58
COMMD6-209ENST00000477377 LEMD1Q68G75 181 aa11.42□□□□□ -0.58
COMMD6-209ENST00000477377 THAP8Q8NA92 274 aa11.42□□□□□ -0.58
COMMD6-209ENST00000477377 OR51G1Q8NGK1 321 aa11.42□□□□□ -0.58
COMMD6-209ENST00000477377 TMEM231Q9H6L2 316 aa11.42□□□□□ -0.58
COMMD6-209ENST00000477377 CENPXA8MT69 81 aa11.41□□□□□ -0.58
COMMD6-209ENST00000477377 DNASE2O00115 360 aaPredicted RBP11.41□□□□□ -0.58
COMMD6-209ENST00000477377 GIG44P09565 113 aaPredicted RBP11.41□□□□□ -0.58
COMMD6-209ENST00000477377 POLR2GP62487 172 aaKnown RBP eCLIP11.41□□□□□ -0.58
COMMD6-209ENST00000477377 RPL11P62913 178 aaKnown RBP11.41□□□□□ -0.58
COMMD6-209ENST00000477377 TMEM182Q6ZP80 229 aaPredicted RBP11.41□□□□□ -0.58
COMMD6-209ENST00000477377 MITD1Q8WV92 249 aa11.41□□□□□ -0.58
COMMD6-209ENST00000477377 CIB3Q96Q77 187 aaPredicted RBP11.41□□□□□ -0.58
COMMD6-209ENST00000477377 CSTL1Q9H114 145 aa11.41□□□□□ -0.58
COMMD6-209ENST00000477377 TCRBP04435 133 aa11.4□□□□□ -0.58
COMMD6-209ENST00000477377 RAB11AP62491 216 aa11.4□□□□□ -0.58
COMMD6-209ENST00000477377 CNPY1Q3B7I2 92 aa11.4□□□□□ -0.58
COMMD6-209ENST00000477377 LINC00299Q6ZSB3 139 aa11.4□□□□□ -0.58
COMMD6-209ENST00000477377 STXBP6Q8NFX7 210 aa11.4□□□□□ -0.58
COMMD6-209ENST00000477377 COQ8AQ8NI60 647 aa11.4□□□□□ -0.58
COMMD6-209ENST00000477377 RNF125Q96EQ8 232 aa11.4□□□□□ -0.58
COMMD6-209ENST00000477377 GRAMD2BQ96HH9 432 aa11.4□□□□□ -0.58
COMMD6-209ENST00000477377 SLC35E1Q96K37 410 aa11.4□□□□□ -0.58
COMMD6-209ENST00000477377 TRGV9Q99603 122 aa11.4□□□□□ -0.58
COMMD6-209ENST00000477377 C20orf85Q9H1P6 137 aa11.4□□□□□ -0.58
COMMD6-209ENST00000477377 RABAC1Q9UI14 185 aa11.4□□□□□ -0.58
COMMD6-209ENST00000477377 AGRNO00468 2067 aa11.4□□□□□ -0.58
COMMD6-209ENST00000477377 ZFP92A6NM28 416 aa11.39□□□□□ -0.59
COMMD6-209ENST00000477377 H3BP45 60 aa11.39□□□□□ -0.59
COMMD6-209ENST00000477377 C4orf46Q504U0 113 aa11.39□□□□□ -0.59
COMMD6-209ENST00000477377 SPANXN5Q5MJ07 72 aa11.39□□□□□ -0.59
COMMD6-209ENST00000477377 CCDC32Q9BV29 185 aa11.39□□□□□ -0.59
COMMD6-209ENST00000477377 TBC1D24Q9ULP9 559 aa11.39□□□□□ -0.59
COMMD6-209ENST00000477377 A0A0J9YWU9 116 aa11.38□□□□□ -0.59
COMMD6-209ENST00000477377 CCNKO75909 580 aa11.38□□□□□ -0.59
COMMD6-209ENST00000477377 ZNF688P0C7X2 276 aa11.38□□□□□ -0.59
COMMD6-209ENST00000477377 TRPT1Q86TN4 253 aaKnown RBP11.38□□□□□ -0.59
COMMD6-209ENST00000477377 C17orf77Q96MU5 243 aa11.38□□□□□ -0.59
COMMD6-209ENST00000477377 LCE6AA0A183 80 aa11.37□□□□□ -0.59
COMMD6-209ENST00000477377 HELTA6NFD8 242 aa11.37□□□□□ -0.59
COMMD6-209ENST00000477377 KNCNA6PVL3 124 aa11.37□□□□□ -0.59
COMMD6-209ENST00000477377 NKX2-1P43699 371 aaPredicted RBP11.37□□□□□ -0.59
COMMD6-209ENST00000477377 EIF2B2P49770 351 aaKnown RBP11.37□□□□□ -0.59
COMMD6-209ENST00000477377 OR2F1Q13607 317 aa11.37□□□□□ -0.59
COMMD6-209ENST00000477377 OR8G2PQ6IF36 304 aa11.37□□□□□ -0.59
COMMD6-209ENST00000477377 TMEM14EPQ6UXP3 125 aa11.37□□□□□ -0.59
COMMD6-209ENST00000477377 GSG1LQ6UXU4 331 aa11.37□□□□□ -0.59
COMMD6-209ENST00000477377 ZBTB8BQ8NAP8 495 aaPredicted RBP11.37□□□□□ -0.59
COMMD6-209ENST00000477377 IL17DQ8TAD2 202 aa11.37□□□□□ -0.59
COMMD6-209ENST00000477377 NARS2Q96I59 477 aaKnown RBP11.37□□□□□ -0.59
COMMD6-209ENST00000477377 SMIM8Q96KF7 97 aa11.37□□□□□ -0.59
COMMD6-209ENST00000477377 PAIP2BQ9ULR5 123 aaKnown RBP11.37□□□□□ -0.59
COMMD6-209ENST00000477377 ALMS1Q8TCU4 4167 aa11.36□□□□□ -0.59
COMMD6-209ENST00000477377 TRAV6A0A075B6T7 132 aa11.36□□□□□ -0.59
COMMD6-209ENST00000477377 SNRPGP15A8MWD9 76 aa11.36□□□□□ -0.59
COMMD6-209ENST00000477377 SOCS3O14543 225 aa11.36□□□□□ -0.59
COMMD6-209ENST00000477377 IFNA21P01568 189 aa11.36□□□□□ -0.59
COMMD6-209ENST00000477377 GATA2P23769 480 aaPredicted RBP11.36□□□□□ -0.59
COMMD6-209ENST00000477377 AP2S1P53680 142 aaPredicted RBP11.36□□□□□ -0.59
COMMD6-209ENST00000477377 RPP30P78346 268 aaKnown RBP11.36□□□□□ -0.59
COMMD6-209ENST00000477377 IFITM3Q01628 133 aa11.36□□□□□ -0.59
COMMD6-209ENST00000477377 IAH1Q2TAA2 248 aaPredicted RBP11.36□□□□□ -0.59
COMMD6-209ENST00000477377 SIGLEC15Q6ZMC9 328 aa11.36□□□□□ -0.59
COMMD6-209ENST00000477377 ACOT7LQ6ZUV0 252 aa11.36□□□□□ -0.59
COMMD6-209ENST00000477377 RAB40CQ96S21 281 aa11.36□□□□□ -0.59
COMMD6-209ENST00000477377 SEC22CQ9BRL7 303 aa11.36□□□□□ -0.59
COMMD6-209ENST00000477377 PBDC1Q9BVG4 233 aa11.36□□□□□ -0.59
COMMD6-209ENST00000477377 NRN1Q9NPD7 142 aa11.36□□□□□ -0.59
COMMD6-209ENST00000477377 PSENENQ9NZ42 101 aa11.36□□□□□ -0.59
COMMD6-209ENST00000477377 RCL1Q9Y2P8 373 aaKnown RBP11.36□□□□□ -0.59
COMMD6-209ENST00000477377 STRAPQ9Y3F4 350 aaKnown RBP11.36□□□□□ -0.59
COMMD6-209ENST00000477377 SSSCA1O60232 199 aa11.35□□□□□ -0.59
COMMD6-209ENST00000477377 MBPP02686 304 aaPredicted RBP11.35□□□□□ -0.59
COMMD6-209ENST00000477377 LYZP61626 148 aa11.35□□□□□ -0.59
COMMD6-209ENST00000477377 ARL16Q0P5N6 197 aa11.35□□□□□ -0.59
COMMD6-209ENST00000477377 TMEM144Q7Z5S9 345 aa11.35□□□□□ -0.59
COMMD6-209ENST00000477377 WDR12Q9GZL7 423 aaKnown RBP11.35□□□□□ -0.59
COMMD6-209ENST00000477377 C11orf1Q9H5F2 150 aa11.35□□□□□ -0.59
COMMD6-209ENST00000477377 SEPSECSQ9HD40 501 aaKnown RBP11.35□□□□□ -0.59
COMMD6-209ENST00000477377 NUDT15Q9NV35 164 aa11.35□□□□□ -0.59
COMMD6-209ENST00000477377 CCSO14618 274 aa11.34□□□□□ -0.59
COMMD6-209ENST00000477377 ATF4P18848 351 aaPredicted RBP11.34□□□□□ -0.59
COMMD6-209ENST00000477377 C4BPBP20851 252 aa11.34□□□□□ -0.59
COMMD6-209ENST00000477377 IL15RAQ13261 267 aa11.34□□□□□ -0.59
COMMD6-209ENST00000477377 C1orf194Q5T5A4 169 aa11.34□□□□□ -0.59
COMMD6-209ENST00000477377 CSNK1G2-AS1Q8NCQ2 148 aa11.34□□□□□ -0.59
COMMD6-209ENST00000477377 ZNF431Q8TF32 576 aaPredicted RBP11.34□□□□□ -0.59
COMMD6-209ENST00000477377 GATAD1Q8WUU5 269 aa11.34□□□□□ -0.59
COMMD6-209ENST00000477377 C7orf66A4D0T2 115 aa11.33□□□□□ -0.6
COMMD6-209ENST00000477377 CA1P00915 261 aaPredicted RBP11.33□□□□□ -0.6
COMMD6-209ENST00000477377 TAS2R30P59541 319 aa11.33□□□□□ -0.6
COMMD6-209ENST00000477377 DEFB1P60022 68 aa11.33□□□□□ -0.6
COMMD6-209ENST00000477377 ASAH1Q13510 395 aa11.33□□□□□ -0.6
COMMD6-209ENST00000477377 PSMG4Q5JS54 123 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms