RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 GPR82Q96P67 336 aa12.36□□□□□ -0.43
CLSTN1-205ENST00000477264 HINT2Q9BX68 163 aa12.36□□□□□ -0.43
CLSTN1-205ENST00000477264 IGHV3-64DA0A0J9YX35 117 aa12.35□□□□□ -0.43
CLSTN1-205ENST00000477264 VWC2LB2RUY7 222 aa12.35□□□□□ -0.43
CLSTN1-205ENST00000477264 UPK2O00526 184 aa12.35□□□□□ -0.43
CLSTN1-205ENST00000477264 CHEK1O14757 476 aa12.35□□□□□ -0.43
CLSTN1-205ENST00000477264 MYCNOSP40205 109 aa12.35□□□□□ -0.43
CLSTN1-205ENST00000477264 HSD52Q0P140 79 aa12.35□□□□□ -0.43
CLSTN1-205ENST00000477264 ZNF841Q6ZN19 808 aa12.35□□□□□ -0.43
CLSTN1-205ENST00000477264 CD177Q8N6Q3 437 aa12.35□□□□□ -0.43
CLSTN1-205ENST00000477264 LRRC29Q8WV35 223 aa12.35□□□□□ -0.43
CLSTN1-205ENST00000477264 LINC00479Q96M42 142 aa12.35□□□□□ -0.43
CLSTN1-205ENST00000477264 DCTN5Q9BTE1 182 aa12.35□□□□□ -0.43
CLSTN1-205ENST00000477264 SIVA1O15304 175 aa12.35□□□□□ -0.43
CLSTN1-205ENST00000477264 P01737 135 aa12.35□□□□□ -0.43
CLSTN1-205ENST00000477264 RNASE2P10153 161 aaKnown RBP12.35□□□□□ -0.43
CLSTN1-205ENST00000477264 COL8A2P25067 703 aa12.35□□□□□ -0.43
CLSTN1-205ENST00000477264 PRDX2P32119 198 aa12.35□□□□□ -0.43
CLSTN1-205ENST00000477264 FOXA3P55318 350 aaPredicted RBP12.35□□□□□ -0.43
CLSTN1-205ENST00000477264 C10orf113Q5VZT2 155 aa12.35□□□□□ -0.43
CLSTN1-205ENST00000477264 CXorf67Q86X51 503 aaPredicted RBP12.35□□□□□ -0.43
CLSTN1-205ENST00000477264 C5orf17Q8NAS9 161 aa12.35□□□□□ -0.43
CLSTN1-205ENST00000477264 OR9G4Q8NGQ1 327 aa12.35□□□□□ -0.43
CLSTN1-205ENST00000477264 OR9G1Q8NH87 305 aa12.35□□□□□ -0.43
CLSTN1-205ENST00000477264 ABHD17AQ96GS6 310 aa12.35□□□□□ -0.43
CLSTN1-205ENST00000477264 FMC1Q96HJ9 113 aa12.35□□□□□ -0.43
CLSTN1-205ENST00000477264 MPV17P39210 176 aa12.34□□□□□ -0.43
CLSTN1-205ENST00000477264 RBMXL3Q8N7X1 1067 aaKnown RBP12.34□□□□□ -0.43
CLSTN1-205ENST00000477264 MLST8Q9BVC4 326 aa12.34□□□□□ -0.43
CLSTN1-205ENST00000477264 C12orf49Q9H741 205 aa12.34□□□□□ -0.43
CLSTN1-205ENST00000477264 EPDR1Q9UM22 224 aa12.34□□□□□ -0.43
CLSTN1-205ENST00000477264 C19orf71A6NCJ1 209 aa12.33□□□□□ -0.44
CLSTN1-205ENST00000477264 SRRM4A7MD48 611 aaKnown RBP12.33□□□□□ -0.44
CLSTN1-205ENST00000477264 PPIAL4DF5H284 164 aa12.33□□□□□ -0.44
CLSTN1-205ENST00000477264 CSN1S1P47710 185 aa12.33□□□□□ -0.44
CLSTN1-205ENST00000477264 PDPNQ86YL7 162 aa12.33□□□□□ -0.44
CLSTN1-205ENST00000477264 OR2K2Q8NGT1 345 aa12.33□□□□□ -0.44
CLSTN1-205ENST00000477264 TMEM190Q8WZ59 177 aa12.33□□□□□ -0.44
CLSTN1-205ENST00000477264 CALYQ9NYX4 217 aa12.33□□□□□ -0.44
CLSTN1-205ENST00000477264 RAXQ9Y2V3 346 aa12.33□□□□□ -0.44
CLSTN1-205ENST00000477264 DMXL2Q8TDJ6 3036 aa12.33□□□□□ -0.44
CLSTN1-205ENST00000477264 INS-IGF2F8WCM5 200 aa12.33□□□□□ -0.44
CLSTN1-205ENST00000477264 K7EM74 188 aa12.33□□□□□ -0.44
CLSTN1-205ENST00000477264 HAX1O00165 279 aa12.33□□□□□ -0.44
CLSTN1-205ENST00000477264 FAM87AP0C7U9 286 aa12.33□□□□□ -0.44
CLSTN1-205ENST00000477264 OR4X2Q8NGF9 303 aa12.33□□□□□ -0.44
CLSTN1-205ENST00000477264 FXYD5Q96DB9 178 aa12.33□□□□□ -0.44
CLSTN1-205ENST00000477264 JKAMPQ9P055 326 aa12.33□□□□□ -0.44
CLSTN1-205ENST00000477264 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.32□□□□□ -0.44
CLSTN1-205ENST00000477264 SAA2P0DJI9 122 aaPredicted RBP12.32□□□□□ -0.44
CLSTN1-205ENST00000477264 ZNF134P52741 427 aa12.32□□□□□ -0.44
CLSTN1-205ENST00000477264 PSG3Q16557 428 aa12.32□□□□□ -0.44
CLSTN1-205ENST00000477264 TMEM30BQ3MIR4 351 aa12.32□□□□□ -0.44
CLSTN1-205ENST00000477264 MOB3BQ86TA1 216 aa12.32□□□□□ -0.44
CLSTN1-205ENST00000477264 GATD1Q8NB37 220 aa12.32□□□□□ -0.44
CLSTN1-205ENST00000477264 OR10AG1Q8NH19 301 aa12.32□□□□□ -0.44
CLSTN1-205ENST00000477264 MGAQ8IWI9 3026 aa12.32□□□□□ -0.44
CLSTN1-205ENST00000477264 TANC2Q9HCD6 1990 aa12.32□□□□□ -0.44
CLSTN1-205ENST00000477264 TRAV5A0A0B4J249 113 aa12.32□□□□□ -0.44
CLSTN1-205ENST00000477264 TIMM8AO60220 97 aaPredicted RBP12.32□□□□□ -0.44
CLSTN1-205ENST00000477264 TFF1P04155 84 aa12.32□□□□□ -0.44
CLSTN1-205ENST00000477264 SLC25A5P05141 298 aaKnown RBP12.32□□□□□ -0.44
CLSTN1-205ENST00000477264 PYYP10082 97 aa12.32□□□□□ -0.44
CLSTN1-205ENST00000477264 FGF6P10767 208 aa12.32□□□□□ -0.44
CLSTN1-205ENST00000477264 SAMD13Q5VXD3 122 aa12.32□□□□□ -0.44
CLSTN1-205ENST00000477264 MORN5Q5VZ52 161 aa12.32□□□□□ -0.44
CLSTN1-205ENST00000477264 VSTM2AQ8TAG5 236 aa12.32□□□□□ -0.44
CLSTN1-205ENST00000477264 DAZAP1Q96EP5 407 aaKnown RBP12.32□□□□□ -0.44
CLSTN1-205ENST00000477264 JMJD8Q96S16 334 aa12.32□□□□□ -0.44
CLSTN1-205ENST00000477264 FNDC4Q9H6D8 234 aaPredicted RBP12.32□□□□□ -0.44
CLSTN1-205ENST00000477264 ANKRD11Q6UB99 2663 aaPredicted RBP12.31□□□□□ -0.44
CLSTN1-205ENST00000477264 PRRC2CQ9Y520 2896 aaKnown RBP12.31□□□□□ -0.44
CLSTN1-205ENST00000477264 A0A0G2JLM5 398 aa12.31□□□□□ -0.44
CLSTN1-205ENST00000477264 A0A1B0GW15 77 aa12.31□□□□□ -0.44
CLSTN1-205ENST00000477264 NPIPB6E9PJ23 425 aa12.31□□□□□ -0.44
CLSTN1-205ENST00000477264 TMEM177Q53S58 311 aa12.31□□□□□ -0.44
CLSTN1-205ENST00000477264 TEX45Q8NA69 505 aa12.31□□□□□ -0.44
CLSTN1-205ENST00000477264 GTSF1Q8WW33 167 aa12.31□□□□□ -0.44
CLSTN1-205ENST00000477264 TMEM186Q96B77 213 aa12.31□□□□□ -0.44
CLSTN1-205ENST00000477264 PGLYRP4Q96LB8 373 aa12.31□□□□□ -0.44
CLSTN1-205ENST00000477264 ZNF747Q9BV97 191 aa12.31□□□□□ -0.44
CLSTN1-205ENST00000477264 AP5S1Q9NUS5 200 aa12.31□□□□□ -0.44
CLSTN1-205ENST00000477264 TEX50A0A1B0GTY4 177 aa12.3□□□□□ -0.44
CLSTN1-205ENST00000477264 TCRBV4S1A1TA0A5B7 111 aa12.3□□□□□ -0.44
CLSTN1-205ENST00000477264 SRRM5B3KS81 715 aa12.3□□□□□ -0.44
CLSTN1-205ENST00000477264 LTAP01374 205 aa12.3□□□□□ -0.44
CLSTN1-205ENST00000477264 FAM222BQ8WU58 562 aa12.3□□□□□ -0.44
CLSTN1-205ENST00000477264 PLPPR2Q96GM1 343 aa12.3□□□□□ -0.44
CLSTN1-205ENST00000477264 DYSFO75923 2080 aa12.3□□□□□ -0.44
CLSTN1-205ENST00000477264 PIEZO1Q92508 2521 aa12.3□□□□□ -0.44
CLSTN1-205ENST00000477264 KIR3DS1Q14943 382 aa12.3□□□□□ -0.44
CLSTN1-205ENST00000477264 BOD1L2Q8IYS8 172 aa12.3□□□□□ -0.44
CLSTN1-205ENST00000477264 THAP8Q8NA92 274 aa12.3□□□□□ -0.44
CLSTN1-205ENST00000477264 OR2Z1Q8NG97 314 aa12.3□□□□□ -0.44
CLSTN1-205ENST00000477264 PERPQ96FX8 193 aa12.3□□□□□ -0.44
CLSTN1-205ENST00000477264 NPFFR1Q9GZQ6 430 aa12.3□□□□□ -0.44
CLSTN1-205ENST00000477264 DSCAML1Q8TD84 2053 aa12.3□□□□□ -0.44
CLSTN1-205ENST00000477264 H3BUT2 72 aa12.29□□□□□ -0.44
CLSTN1-205ENST00000477264 BMI1P35226 326 aa12.29□□□□□ -0.44
CLSTN1-205ENST00000477264 ERHP84090 104 aaKnown RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms