RNA–Protein interactions for RNA: ENST00000476467.1

PSMB4-204, Transcript of proteasome subunit beta 4, humanhuman

TSL 2

Gene PSMB4, Length 2,067 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-204ENST00000476467 TREML4Q6UXN2 200 aa10.37□□□□□ -0.75
PSMB4-204ENST00000476467 C1QL4Q86Z23 238 aa10.37□□□□□ -0.75
PSMB4-204ENST00000476467 TTC9CQ8N5M4 171 aa10.37□□□□□ -0.75
PSMB4-204ENST00000476467 ZNF114Q8NC26 417 aa10.37□□□□□ -0.75
PSMB4-204ENST00000476467 Q8WTZ3 238 aa10.37□□□□□ -0.75
PSMB4-204ENST00000476467 C2CD3Q4AC94 2353 aa10.36□□□□□ -0.75
PSMB4-204ENST00000476467 SMCO3A2RU48 225 aa10.36□□□□□ -0.75
PSMB4-204ENST00000476467 TMEM250H0YL14 139 aa10.36□□□□□ -0.75
PSMB4-204ENST00000476467 REG1AP05451 166 aa10.36□□□□□ -0.75
PSMB4-204ENST00000476467 CRYGCP07315 174 aa10.36□□□□□ -0.75
PSMB4-204ENST00000476467 DEFA4P12838 97 aa10.36□□□□□ -0.75
PSMB4-204ENST00000476467 OPRK1P41145 380 aa10.36□□□□□ -0.75
PSMB4-204ENST00000476467 SNRPEP62304 92 aaKnown RBP10.36□□□□□ -0.75
PSMB4-204ENST00000476467 ZNF343Q6P1L6 599 aa10.36□□□□□ -0.75
PSMB4-204ENST00000476467 OR4F5Q8NH21 305 aa10.36□□□□□ -0.75
PSMB4-204ENST00000476467 GATAD1Q8WUU5 269 aa10.36□□□□□ -0.75
PSMB4-204ENST00000476467 MGST2Q99735 147 aa10.36□□□□□ -0.75
PSMB4-204ENST00000476467 YIF1AO95070 293 aa10.35□□□□□ -0.75
PSMB4-204ENST00000476467 CXCL1P09341 107 aa10.35□□□□□ -0.75
PSMB4-204ENST00000476467 CFHR3Q02985 330 aa10.35□□□□□ -0.75
PSMB4-204ENST00000476467 BSXQ3C1V8 233 aa10.35□□□□□ -0.75
PSMB4-204ENST00000476467 GCSAMLQ5JQS6 135 aa10.35□□□□□ -0.75
PSMB4-204ENST00000476467 SLC24A4Q8NFF2 622 aa10.35□□□□□ -0.75
PSMB4-204ENST00000476467 GGTLC1Q9BX51 225 aa10.35□□□□□ -0.75
PSMB4-204ENST00000476467 F11RQ9Y624 299 aaKnown RBP10.35□□□□□ -0.75
PSMB4-204ENST00000476467 RNASE2P10153 161 aaKnown RBP10.35□□□□□ -0.75
PSMB4-204ENST00000476467 NPY1RP25929 384 aa10.35□□□□□ -0.75
PSMB4-204ENST00000476467 PPIFP30405 207 aaKnown RBP10.35□□□□□ -0.75
PSMB4-204ENST00000476467 CYP2G1PQ6ZSU1 146 aa10.35□□□□□ -0.75
PSMB4-204ENST00000476467 PRIMA1Q86XR5 153 aa10.35□□□□□ -0.75
PSMB4-204ENST00000476467 OR5T1Q8NG75 326 aa10.35□□□□□ -0.75
PSMB4-204ENST00000476467 LINC01006Q8NI28 216 aa10.35□□□□□ -0.75
PSMB4-204ENST00000476467 SMIM7Q9BQ49 75 aa10.35□□□□□ -0.75
PSMB4-204ENST00000476467 WNT10AQ9GZT5 417 aa10.35□□□□□ -0.75
PSMB4-204ENST00000476467 TMEM242Q9NWH2 141 aa10.35□□□□□ -0.75
PSMB4-204ENST00000476467 NAT8Q9UHE5 227 aa10.35□□□□□ -0.75
PSMB4-204ENST00000476467 LSM4Q9Y4Z0 139 aaKnown RBP10.35□□□□□ -0.75
PSMB4-204ENST00000476467 UBE2CO00762 179 aa10.34□□□□□ -0.75
PSMB4-204ENST00000476467 S100A6P06703 90 aa10.34□□□□□ -0.75
PSMB4-204ENST00000476467 RND2P52198 227 aa10.34□□□□□ -0.75
PSMB4-204ENST00000476467 SUB1P53999 127 aaKnown RBP eCLIP10.34□□□□□ -0.757e-7■■■■■ 30.6
PSMB4-204ENST00000476467 ATP5IP56385 69 aaPredicted RBP10.34□□□□□ -0.75
PSMB4-204ENST00000476467 B2MP61769 119 aa10.34□□□□□ -0.75
PSMB4-204ENST00000476467 C2orf83Q53S99 150 aa10.34□□□□□ -0.75
PSMB4-204ENST00000476467 C19orf35Q6ZS72 473 aa10.34□□□□□ -0.75
PSMB4-204ENST00000476467 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.34□□□□□ -0.75
PSMB4-204ENST00000476467 OR1L6Q8NGR2 347 aa10.34□□□□□ -0.75
PSMB4-204ENST00000476467 OR1P1Q8NH06 330 aa10.34□□□□□ -0.75
PSMB4-204ENST00000476467 URGCP-MRPS24S4R325 110 aa10.34□□□□□ -0.75
PSMB4-204ENST00000476467 PSMB11A5LHX3 300 aa10.34□□□□□ -0.75
PSMB4-204ENST00000476467 PAGE4O60829 102 aa10.34□□□□□ -0.75
PSMB4-204ENST00000476467 RPS10P46783 165 aaKnown RBP10.34□□□□□ -0.75
PSMB4-204ENST00000476467 SLC35B1P78383 322 aa10.34□□□□□ -0.75
PSMB4-204ENST00000476467 LURAP1LQ8IV03 231 aa10.34□□□□□ -0.75
PSMB4-204ENST00000476467 NPVFQ9HCQ7 196 aa10.34□□□□□ -0.75
PSMB4-204ENST00000476467 ZMAT5Q9UDW3 170 aaKnown RBP10.34□□□□□ -0.75
PSMB4-204ENST00000476467 PXMP4Q9Y6I8 212 aa10.34□□□□□ -0.75
PSMB4-204ENST00000476467 TGIF2-C20orf24A0A0A6YYL0 155 aa10.33□□□□□ -0.76
PSMB4-204ENST00000476467 CLPSL1A2RUU4 121 aa10.33□□□□□ -0.76
PSMB4-204ENST00000476467 H3BUA1 57 aa10.33□□□□□ -0.76
PSMB4-204ENST00000476467 IGHG4P01861 327 aa10.33□□□□□ -0.76
PSMB4-204ENST00000476467 MIC13Q5XKP0 118 aa10.33□□□□□ -0.76
PSMB4-204ENST00000476467 RPUSD4Q96CM3 377 aaKnown RBP10.33□□□□□ -0.76
PSMB4-204ENST00000476467 OR4F4Q96R69 305 aa10.33□□□□□ -0.76
PSMB4-204ENST00000476467 PARLQ9H300 379 aa10.33□□□□□ -0.76
PSMB4-204ENST00000476467 SETD2Q9BYW2 2564 aaPredicted RBP10.32□□□□□ -0.76
PSMB4-204ENST00000476467 A0A1B0GUS0 222 aa10.32□□□□□ -0.76
PSMB4-204ENST00000476467 TMEM89A2RUT3 159 aa10.32□□□□□ -0.76
PSMB4-204ENST00000476467 ZNF98A6NK75 572 aa10.32□□□□□ -0.76
PSMB4-204ENST00000476467 BRI3O95415 125 aa10.32□□□□□ -0.76
PSMB4-204ENST00000476467 IGLV1-40P01703 118 aa10.32□□□□□ -0.76
PSMB4-204ENST00000476467 MFAP2P55001 183 aa10.32□□□□□ -0.76
PSMB4-204ENST00000476467 TMEM241Q24JQ0 296 aa10.32□□□□□ -0.76
PSMB4-204ENST00000476467 ZNF674Q2M3X9 581 aa10.32□□□□□ -0.76
PSMB4-204ENST00000476467 KLK9Q2XQG4 91 aa10.32□□□□□ -0.76
PSMB4-204ENST00000476467 PVRIGQ6DKI7 326 aa10.32□□□□□ -0.76
PSMB4-204ENST00000476467 ZNF329Q86UD4 541 aa10.32□□□□□ -0.76
PSMB4-204ENST00000476467 CTDSP1Q9GZU7 261 aa10.32□□□□□ -0.76
PSMB4-204ENST00000476467 KCNIP2Q9NS61 270 aa10.32□□□□□ -0.76
PSMB4-204ENST00000476467 KLK9Q9UKQ9 250 aa10.32□□□□□ -0.76
PSMB4-204ENST00000476467 DMRT1Q9Y5R6 373 aa10.32□□□□□ -0.76
PSMB4-204ENST00000476467 IGLV11-55A0A075B6I3 123 aa10.32□□□□□ -0.76
PSMB4-204ENST00000476467 A0A1W2PPV4 95 aa10.32□□□□□ -0.76
PSMB4-204ENST00000476467 FNDC10F2Z333 226 aa10.32□□□□□ -0.76
PSMB4-204ENST00000476467 HIST1H1BP16401 226 aaKnown RBP10.32□□□□□ -0.76
PSMB4-204ENST00000476467 KLHDC1Q8N7A1 406 aa10.32□□□□□ -0.76
PSMB4-204ENST00000476467 FANCD2OSQ96PS1 177 aa10.32□□□□□ -0.76
PSMB4-204ENST00000476467 ZNF355PQ9NSJ1 428 aa10.32□□□□□ -0.76
PSMB4-204ENST00000476467 RNF114Q9Y508 228 aa10.32□□□□□ -0.76
PSMB4-204ENST00000476467 CORTO00230 105 aa10.31□□□□□ -0.76
PSMB4-204ENST00000476467 RPL23P62829 140 aaKnown RBP10.31□□□□□ -0.76
PSMB4-204ENST00000476467 FOXE3Q13461 319 aa10.31□□□□□ -0.76
PSMB4-204ENST00000476467 ADIRFQ15847 76 aa10.31□□□□□ -0.76
PSMB4-204ENST00000476467 TEPPQ6URK8 271 aa10.31□□□□□ -0.76
PSMB4-204ENST00000476467 WIPF2Q8TF74 440 aaPredicted RBP10.31□□□□□ -0.76
PSMB4-204ENST00000476467 C11orf94C9JXX5 98 aa10.3□□□□□ -0.76
PSMB4-204ENST00000476467 ELANEP08246 267 aa10.3□□□□□ -0.76
PSMB4-204ENST00000476467 STAG3L2P0CL84 134 aa10.3□□□□□ -0.76
PSMB4-204ENST00000476467 STAG3L3P0CL85 134 aa10.3□□□□□ -0.76
PSMB4-204ENST00000476467 PF4V1P10720 104 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms