RNA–Protein interactions for RNA: ENST00000476162.5

VARS2-207, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best)

Gene VARS2, Length 2,228 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-207ENST00000476162 DCHS2Q6V1P9 2916 aa12.84□□□□□ -0.35
VARS2-207ENST00000476162 BUB1B-PAK6H3BSN5 160 aa12.84□□□□□ -0.35
VARS2-207ENST00000476162 CD99P14209 185 aa12.84□□□□□ -0.35
VARS2-207ENST00000476162 COX7A1P24310 79 aa12.84□□□□□ -0.35
VARS2-207ENST00000476162 CNTFRP26992 372 aa12.84□□□□□ -0.35
VARS2-207ENST00000476162 SUB1P53999 127 aaKnown RBP eCLIP12.84□□□□□ -0.351e-7■■■■■ 35.4
VARS2-207ENST00000476162 OCIAD2Q56VL3 154 aa12.84□□□□□ -0.35
VARS2-207ENST00000476162 INSIG2Q9Y5U4 225 aa12.84□□□□□ -0.35
VARS2-207ENST00000476162 DIRC3C9JPN6 131 aa12.83□□□□□ -0.36
VARS2-207ENST00000476162 OR7C2O60412 319 aa12.83□□□□□ -0.36
VARS2-207ENST00000476162 RPS20P60866 119 aaKnown RBP12.83□□□□□ -0.36
VARS2-207ENST00000476162 PNKDQ8N490 385 aa12.83□□□□□ -0.36
VARS2-207ENST00000476162 OCC1Q8TAD7 63 aa12.83□□□□□ -0.36
VARS2-207ENST00000476162 NPIPB3Q92617 1050 aa12.83□□□□□ -0.36
VARS2-207ENST00000476162 C19orf24Q9BVV8 132 aa12.83□□□□□ -0.36
VARS2-207ENST00000476162 CST9LQ9H4G1 147 aa12.83□□□□□ -0.36
VARS2-207ENST00000476162 IGHV1-3A0A0C4DH29 117 aa12.82□□□□□ -0.36
VARS2-207ENST00000476162 HINT1P49773 126 aaPredicted RBP12.82□□□□□ -0.36
VARS2-207ENST00000476162 TEX45Q8NA69 505 aa12.82□□□□□ -0.36
VARS2-207ENST00000476162 C11orf52Q96A22 123 aa12.82□□□□□ -0.36
VARS2-207ENST00000476162 SFRP2Q96HF1 295 aa12.82□□□□□ -0.36
VARS2-207ENST00000476162 UHRF2Q96PU4 802 aa12.82□□□□□ -0.36
VARS2-207ENST00000476162 TMEM167BQ9NRX6 74 aa12.82□□□□□ -0.36
VARS2-207ENST00000476162 RNF24Q9Y225 148 aa12.82□□□□□ -0.36
VARS2-207ENST00000476162 MRPS16Q9Y3D3 137 aaKnown RBP12.82□□□□□ -0.36
VARS2-207ENST00000476162 COL6A6A6NMZ7 2263 aa12.82□□□□□ -0.36
VARS2-207ENST00000476162 OR10J4P0C629 311 aa12.82□□□□□ -0.36
VARS2-207ENST00000476162 LDLRAD2Q5SZI1 272 aa12.82□□□□□ -0.36
VARS2-207ENST00000476162 PQLC2Q6ZP29 291 aa12.82□□□□□ -0.36
VARS2-207ENST00000476162 OR8B3Q8NGG8 313 aa12.82□□□□□ -0.36
VARS2-207ENST00000476162 OR8B2Q96RD0 313 aa12.82□□□□□ -0.36
VARS2-207ENST00000476162 SLC25A33Q9BSK2 321 aa12.82□□□□□ -0.36
VARS2-207ENST00000476162 MRPL36Q9P0J6 103 aaKnown RBP12.82□□□□□ -0.36
VARS2-207ENST00000476162 IGLC7A0M8Q6 106 aa12.81□□□□□ -0.36
VARS2-207ENST00000476162 PSMB11A5LHX3 300 aa12.81□□□□□ -0.36
VARS2-207ENST00000476162 AREGP15514 252 aa12.81□□□□□ -0.36
VARS2-207ENST00000476162 CRISP2P16562 243 aa12.81□□□□□ -0.36
VARS2-207ENST00000476162 TAS2R45P59539 299 aa12.81□□□□□ -0.36
VARS2-207ENST00000476162 RHOGP84095 191 aa12.81□□□□□ -0.36
VARS2-207ENST00000476162 MORN5Q5VZ52 161 aa12.81□□□□□ -0.36
VARS2-207ENST00000476162 HCP5Q6MZN7 132 aa12.81□□□□□ -0.36
VARS2-207ENST00000476162 SAMD10Q9BYL1 202 aa12.81□□□□□ -0.36
VARS2-207ENST00000476162 RAB1BQ9H0U4 201 aa12.81□□□□□ -0.36
VARS2-207ENST00000476162 TACC2O95359 2948 aa12.81□□□□□ -0.36
VARS2-207ENST00000476162 CRYGBP07316 175 aa12.81□□□□□ -0.36
VARS2-207ENST00000476162 C8orf88P0DMB2 117 aa12.81□□□□□ -0.36
VARS2-207ENST00000476162 APELAP0DMC3 54 aa12.81□□□□□ -0.36
VARS2-207ENST00000476162 KRTDAPP60985 99 aa12.81□□□□□ -0.36
VARS2-207ENST00000476162 ZNF90Q03938 601 aa12.81□□□□□ -0.36
VARS2-207ENST00000476162 TNXAQ16473 311 aa12.81□□□□□ -0.36
VARS2-207ENST00000476162 MMD2Q8IY49 270 aa12.81□□□□□ -0.36
VARS2-207ENST00000476162 ONECUT1Q9UBC0 465 aa12.81□□□□□ -0.36
VARS2-207ENST00000476162 ARL2-SNX15V9GYD0 113 aa12.81□□□□□ -0.36
VARS2-207ENST00000476162 IGKV1D-37A0A075B6S9 117 aa12.8□□□□□ -0.36
VARS2-207ENST00000476162 TRAV5A0A0B4J249 113 aa12.8□□□□□ -0.36
VARS2-207ENST00000476162 MDFIC2A0A1B0GVS7 189 aa12.8□□□□□ -0.36
VARS2-207ENST00000476162 RBP4P02753 201 aa12.8□□□□□ -0.36
VARS2-207ENST00000476162 GPX1P07203 203 aa12.8□□□□□ -0.36
VARS2-207ENST00000476162 TSPOP30536 169 aa12.8□□□□□ -0.36
VARS2-207ENST00000476162 C8orf46Q8TAG6 207 aa12.8□□□□□ -0.36
VARS2-207ENST00000476162 RPEQ96AT9 228 aa12.8□□□□□ -0.36
VARS2-207ENST00000476162 SIGLEC9Q9Y336 463 aa12.8□□□□□ -0.36
VARS2-207ENST00000476162 TRAV34A0A0B4J273 112 aa12.8□□□□□ -0.36
VARS2-207ENST00000476162 C22orf46C9J442 243 aa12.8□□□□□ -0.36
VARS2-207ENST00000476162 CRYBB3P26998 211 aa12.8□□□□□ -0.36
VARS2-207ENST00000476162 RPL27AP46776 148 aaKnown RBP12.8□□□□□ -0.36
VARS2-207ENST00000476162 Q0VG73 95 aa12.8□□□□□ -0.36
VARS2-207ENST00000476162 C19orf35Q6ZS72 473 aa12.8□□□□□ -0.36
VARS2-207ENST00000476162 TCRBV4S1A1TA0A5B7 111 aa12.79□□□□□ -0.36
VARS2-207ENST00000476162 F2Z2F3 143 aa12.79□□□□□ -0.36
VARS2-207ENST00000476162 K7EN84 100 aa12.79□□□□□ -0.36
VARS2-207ENST00000476162 MFAP2P55001 183 aa12.79□□□□□ -0.36
VARS2-207ENST00000476162 RUSC1-AS1Q66K80 236 aa12.79□□□□□ -0.36
VARS2-207ENST00000476162 SIGLECL1Q8N7X8 197 aa12.79□□□□□ -0.36
VARS2-207ENST00000476162 SGMS2Q8NHU3 365 aa12.79□□□□□ -0.36
VARS2-207ENST00000476162 FAM167A-AS1Q96KT0 104 aa12.79□□□□□ -0.36
VARS2-207ENST00000476162 SLC25A2Q9BXI2 301 aa12.79□□□□□ -0.36
VARS2-207ENST00000476162 MRPL32Q9BYC8 188 aaKnown RBP12.79□□□□□ -0.36
VARS2-207ENST00000476162 ZNF586Q9NXT0 402 aa12.79□□□□□ -0.36
VARS2-207ENST00000476162 GGTLC3B5MD39 225 aa12.78□□□□□ -0.36
VARS2-207ENST00000476162 LIPFP07098 398 aa12.78□□□□□ -0.36
VARS2-207ENST00000476162 C16orf54Q6UWD8 224 aa12.78□□□□□ -0.36
VARS2-207ENST00000476162 BAGE3Q86Y29 109 aa12.78□□□□□ -0.36
VARS2-207ENST00000476162 BAGE2Q86Y30 109 aa12.78□□□□□ -0.36
VARS2-207ENST00000476162 KLHDC1Q8N7A1 406 aa12.78□□□□□ -0.36
VARS2-207ENST00000476162 THAP8Q8NA92 274 aa12.78□□□□□ -0.36
VARS2-207ENST00000476162 LY6G5BQ8NDX9 201 aa12.78□□□□□ -0.36
VARS2-207ENST00000476162 CDC42EP3Q9UKI2 254 aa12.78□□□□□ -0.36
VARS2-207ENST00000476162 CHD8Q9HCK8 2581 aa12.78□□□□□ -0.36
VARS2-207ENST00000476162 C9JCJ5 164 aa12.78□□□□□ -0.36
VARS2-207ENST00000476162 COX7A2P2O60397 106 aa12.78□□□□□ -0.36
VARS2-207ENST00000476162 C11orf71Q6IPW1 123 aa12.78□□□□□ -0.36
VARS2-207ENST00000476162 PATE2Q6UY27 113 aa12.78□□□□□ -0.36
VARS2-207ENST00000476162 PPP1R27Q86WC6 154 aa12.78□□□□□ -0.36
VARS2-207ENST00000476162 OR10G8Q8NGN5 311 aa12.78□□□□□ -0.36
VARS2-207ENST00000476162 EAF1Q96JC9 268 aaPredicted RBP12.78□□□□□ -0.36
VARS2-207ENST00000476162 MRPL27Q9P0M9 148 aaKnown RBP12.78□□□□□ -0.36
VARS2-207ENST00000476162 AMMECR1Q9Y4X0 333 aaPredicted RBP12.78□□□□□ -0.36
VARS2-207ENST00000476162 LY6LH3BQJ8 138 aa12.77□□□□□ -0.36
VARS2-207ENST00000476162 LY6DQ14210 128 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms