RNA–Protein interactions for RNA: ENST00000476045.5

VPS13D-206, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-206ENST00000476045 TCEAL7Q9BRU2 100 aa3.34□□□□□ -1.87
VPS13D-206ENST00000476045 TMEM147Q9BVK8 224 aa3.34□□□□□ -1.87
VPS13D-206ENST00000476045 MAP1LC3BQ9GZQ8 125 aa3.34□□□□□ -1.87
VPS13D-206ENST00000476045 WDR61Q9GZS3 305 aaKnown RBP3.34□□□□□ -1.87
VPS13D-206ENST00000476045 TOLLIPQ9H0E2 274 aa3.34□□□□□ -1.87
VPS13D-206ENST00000476045 OR2D2Q9H210 308 aa3.34□□□□□ -1.87
VPS13D-206ENST00000476045 OR51M1Q9H341 326 aa3.34□□□□□ -1.87
VPS13D-206ENST00000476045 SMDT1Q9H4I9 107 aa3.34□□□□□ -1.87
VPS13D-206ENST00000476045 SLC25A22Q9H936 323 aa3.34□□□□□ -1.87
VPS13D-206ENST00000476045 OR6C3Q9NZP0 311 aa3.34□□□□□ -1.87
VPS13D-206ENST00000476045 DOK5Q9P104 306 aa3.34□□□□□ -1.87
VPS13D-206ENST00000476045 VAX2Q9UIW0 290 aa3.34□□□□□ -1.87
VPS13D-206ENST00000476045 GAB2Q9UQC2 676 aa3.34□□□□□ -1.87
VPS13D-206ENST00000476045 MOB4Q9Y3A3 225 aa3.34□□□□□ -1.87
VPS13D-206ENST00000476045 A0A087WWC5 75 aa3.33□□□□□ -1.88
VPS13D-206ENST00000476045 ODAMA1E959 279 aa3.33□□□□□ -1.88
VPS13D-206ENST00000476045 SMCO3A2RU48 225 aa3.33□□□□□ -1.88
VPS13D-206ENST00000476045 IFITM10A6NMD0 228 aa3.33□□□□□ -1.88
VPS13D-206ENST00000476045 ZNF729A6NN14 1252 aaPredicted RBP3.33□□□□□ -1.88
VPS13D-206ENST00000476045 RAB29O14966 203 aa3.33□□□□□ -1.88
VPS13D-206ENST00000476045 SPRY2O43597 315 aa3.33□□□□□ -1.88
VPS13D-206ENST00000476045 RAMP3O60896 148 aa3.33□□□□□ -1.88
VPS13D-206ENST00000476045 TRGC1P0CF51 173 aa3.33□□□□□ -1.88
VPS13D-206ENST00000476045 NHLRC4P0CG21 123 aaPredicted RBP3.33□□□□□ -1.88
VPS13D-206ENST00000476045 S100PP25815 95 aa3.33□□□□□ -1.88
VPS13D-206ENST00000476045 CDX1P47902 265 aaPredicted RBP3.33□□□□□ -1.88
VPS13D-206ENST00000476045 PCP4P48539 62 aa3.33□□□□□ -1.88
VPS13D-206ENST00000476045 KRTAP10-3P60369 221 aa3.33□□□□□ -1.88
VPS13D-206ENST00000476045 TNFRSF9Q07011 255 aa3.33□□□□□ -1.88
VPS13D-206ENST00000476045 CATR1Q13166 79 aa3.33□□□□□ -1.88
VPS13D-206ENST00000476045 SSX2Q16385 188 aa3.33□□□□□ -1.88
VPS13D-206ENST00000476045 HLA-DRB5Q30154 266 aa3.33□□□□□ -1.88
VPS13D-206ENST00000476045 C9orf152Q5JTZ5 239 aa3.33□□□□□ -1.88
VPS13D-206ENST00000476045 MORN5Q5VZ52 161 aa3.33□□□□□ -1.88
VPS13D-206ENST00000476045 TMEM14EPQ6UXP3 125 aa3.33□□□□□ -1.88
VPS13D-206ENST00000476045 TCF23Q7RTU1 214 aa3.33□□□□□ -1.88
VPS13D-206ENST00000476045 H2BFWTQ7Z2G1 175 aa3.33□□□□□ -1.88
VPS13D-206ENST00000476045 C11orf42Q8N5U0 333 aa3.33□□□□□ -1.88
VPS13D-206ENST00000476045 ZNF645Q8N7E2 425 aa3.33□□□□□ -1.88
VPS13D-206ENST00000476045 ZNF383Q8NA42 475 aa3.33□□□□□ -1.88
VPS13D-206ENST00000476045 OR10A7Q8NGE5 316 aa3.33□□□□□ -1.88
VPS13D-206ENST00000476045 OR4P4Q8NGL7 312 aa3.33□□□□□ -1.88
VPS13D-206ENST00000476045 OR10G4Q8NGN3 311 aa3.33□□□□□ -1.88
VPS13D-206ENST00000476045 OR10G9Q8NGN4 311 aa3.33□□□□□ -1.88
VPS13D-206ENST00000476045 OR10G7Q8NGN6 311 aa3.33□□□□□ -1.88
VPS13D-206ENST00000476045 OR13A1Q8NGR1 328 aa3.33□□□□□ -1.88
VPS13D-206ENST00000476045 DTD1Q8TEA8 209 aa3.33□□□□□ -1.88
VPS13D-206ENST00000476045 GLMPQ8WWB7 406 aa3.33□□□□□ -1.88
VPS13D-206ENST00000476045 FRZBQ92765 325 aa3.33□□□□□ -1.88
VPS13D-206ENST00000476045 CORO2AQ92828 525 aa3.33□□□□□ -1.88
VPS13D-206ENST00000476045 RPEQ96AT9 228 aa3.33□□□□□ -1.88
VPS13D-206ENST00000476045 GALMQ96C23 342 aa3.33□□□□□ -1.88
VPS13D-206ENST00000476045 R3HDM4Q96D70 268 aa3.33□□□□□ -1.88
VPS13D-206ENST00000476045 COQ2Q96H96 371 aa3.33□□□□□ -1.88
VPS13D-206ENST00000476045 SMIM7Q9BQ49 75 aa3.33□□□□□ -1.88
VPS13D-206ENST00000476045 PSMG3Q9BT73 122 aaPredicted RBP3.33□□□□□ -1.88
VPS13D-206ENST00000476045 GGACTQ9BVM4 153 aa3.33□□□□□ -1.88
VPS13D-206ENST00000476045 ACTR3CQ9C0K3 210 aaPredicted RBP3.33□□□□□ -1.88
VPS13D-206ENST00000476045 SDF2L1Q9HCN8 221 aa3.33□□□□□ -1.88
VPS13D-206ENST00000476045 DPM3Q9P2X0 92 aa3.33□□□□□ -1.88
VPS13D-206ENST00000476045 ZNF580Q9UK33 172 aa3.33□□□□□ -1.88
VPS13D-206ENST00000476045 PSG11Q9UQ72 335 aa3.33□□□□□ -1.88
VPS13D-206ENST00000476045 TSSC4Q9Y5U2 329 aaPredicted RBP3.33□□□□□ -1.88
VPS13D-206ENST00000476045 PIGBOS1A0A0B4J2F0 54 aa3.32□□□□□ -1.88
VPS13D-206ENST00000476045 CTXND1A0A1B0GTU2 59 aa3.32□□□□□ -1.88
VPS13D-206ENST00000476045 CXorf65A6NEN9 183 aa3.32□□□□□ -1.88
VPS13D-206ENST00000476045 KRTAP29-1A8MX34 341 aaPredicted RBP3.32□□□□□ -1.88
VPS13D-206ENST00000476045 B4DEV8 164 aa3.32□□□□□ -1.88
VPS13D-206ENST00000476045 SEC14L6B5MCN3 397 aa3.32□□□□□ -1.88
VPS13D-206ENST00000476045 TEX22C9J3V5 150 aa3.32□□□□□ -1.88
VPS13D-206ENST00000476045 H7BYZ3 331 aa3.32□□□□□ -1.88
VPS13D-206ENST00000476045 M0R1X1 148 aa3.32□□□□□ -1.88
VPS13D-206ENST00000476045 PPP1R2P9O14990 202 aa3.32□□□□□ -1.88
VPS13D-206ENST00000476045 HIST1H2BKO60814 126 aa3.32□□□□□ -1.88
VPS13D-206ENST00000476045 PAGE4O60829 102 aa3.32□□□□□ -1.88
VPS13D-206ENST00000476045 KBTBD11O94819 623 aa3.32□□□□□ -1.88
VPS13D-206ENST00000476045 IGLV1-47P01700 117 aa3.32□□□□□ -1.88
VPS13D-206ENST00000476045 IGHV3-7P01780 117 aa3.32□□□□□ -1.88
VPS13D-206ENST00000476045 HIST1H2BJP06899 126 aa3.32□□□□□ -1.88
VPS13D-206ENST00000476045 OR9G9P0C7N8 305 aa3.32□□□□□ -1.88
VPS13D-206ENST00000476045 P0C879 139 aa3.32□□□□□ -1.88
VPS13D-206ENST00000476045 FAM106CPP0CH98 169 aa3.32□□□□□ -1.88
VPS13D-206ENST00000476045 HIST1H2BOP23527 126 aa3.32□□□□□ -1.88
VPS13D-206ENST00000476045 IL3RAP26951 378 aa3.32□□□□□ -1.88
VPS13D-206ENST00000476045 HIST1H2BBP33778 126 aa3.32□□□□□ -1.88
VPS13D-206ENST00000476045 SSTR5P35346 364 aa3.32□□□□□ -1.88
VPS13D-206ENST00000476045 GPR12P47775 334 aa3.32□□□□□ -1.88
VPS13D-206ENST00000476045 PSMB3P49720 205 aa3.32□□□□□ -1.88
VPS13D-206ENST00000476045 RAB7AP51149 207 aa3.32□□□□□ -1.88
VPS13D-206ENST00000476045 RND2P52198 227 aa3.32□□□□□ -1.88
VPS13D-206ENST00000476045 PRRX1P54821 245 aa3.32□□□□□ -1.88
VPS13D-206ENST00000476045 DLX1P56177 255 aa3.32□□□□□ -1.88
VPS13D-206ENST00000476045 HIST1H2BDP58876 126 aa3.32□□□□□ -1.88
VPS13D-206ENST00000476045 BRWD1-AS2P59051 145 aa3.32□□□□□ -1.88
VPS13D-206ENST00000476045 CD81P60033 236 aa3.32□□□□□ -1.88
VPS13D-206ENST00000476045 HIST1H2BCP62807 126 aa3.32□□□□□ -1.88
VPS13D-206ENST00000476045 RPL23P62829 140 aaKnown RBP3.32□□□□□ -1.88
VPS13D-206ENST00000476045 SLC35B1P78383 322 aa3.32□□□□□ -1.88
VPS13D-206ENST00000476045 EIF4EBP1Q13541 118 aaPredicted RBP3.32□□□□□ -1.88
VPS13D-206ENST00000476045 HIST2H2BEQ16778 126 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms