RNA–Protein interactions for RNA: ENST00000475470.1

RPUSD3-215, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,413 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-215ENST00000475470 RD3LP0DJH9 198 aa12.13□□□□□ -0.47
RPUSD3-215ENST00000475470 ELOVL1Q9BW60 279 aa12.13□□□□□ -0.47
RPUSD3-215ENST00000475470 GSN-AS1Q9NRJ2 163 aa12.13□□□□□ -0.47
RPUSD3-215ENST00000475470 HIGD1AQ9Y241 93 aa12.13□□□□□ -0.47
RPUSD3-215ENST00000475470 IGKV1-17P01599 117 aa12.12□□□□□ -0.47
RPUSD3-215ENST00000475470 NDUFA6P56556 154 aa12.12□□□□□ -0.47
RPUSD3-215ENST00000475470 FANCD2OSQ96PS1 177 aa12.12□□□□□ -0.47
RPUSD3-215ENST00000475470 LY96Q9Y6Y9 160 aa12.12□□□□□ -0.47
RPUSD3-215ENST00000475470 IGLV11-55A0A075B6I3 123 aa12.12□□□□□ -0.47
RPUSD3-215ENST00000475470 IGHV3OR16-10A0A075B7F0 116 aa12.12□□□□□ -0.47
RPUSD3-215ENST00000475470 TGOLN2O43493 480 aa12.12□□□□□ -0.47
RPUSD3-215ENST00000475470 HLA-DRB1P01911 266 aa12.12□□□□□ -0.47
RPUSD3-215ENST00000475470 TRGC2P03986 189 aa12.12□□□□□ -0.47
RPUSD3-215ENST00000475470 COX6B1P14854 86 aa12.12□□□□□ -0.47
RPUSD3-215ENST00000475470 SRP14P37108 136 aaKnown RBP12.12□□□□□ -0.47
RPUSD3-215ENST00000475470 GNG4P50150 75 aa12.12□□□□□ -0.47
RPUSD3-215ENST00000475470 CLEC12BQ2HXU8 276 aa12.12□□□□□ -0.47
RPUSD3-215ENST00000475470 KCNIP4Q6PIL6 250 aa12.12□□□□□ -0.47
RPUSD3-215ENST00000475470 SNRPCP09234 159 aaKnown RBP12.11□□□□□ -0.47
RPUSD3-215ENST00000475470 CENPWQ5EE01 88 aa12.11□□□□□ -0.47
RPUSD3-215ENST00000475470 NRGNQ92686 78 aa12.11□□□□□ -0.47
RPUSD3-215ENST00000475470 PYGO2Q9BRQ0 406 aa12.11□□□□□ -0.47
RPUSD3-215ENST00000475470 TCEAL7Q9BRU2 100 aa12.11□□□□□ -0.47
RPUSD3-215ENST00000475470 THYN1Q9P016 225 aa12.11□□□□□ -0.47
RPUSD3-215ENST00000475470 S4R3C0 116 aa12.11□□□□□ -0.47
RPUSD3-215ENST00000475470 ABCA1O95477 2261 aa12.11□□□□□ -0.47
RPUSD3-215ENST00000475470 IGHV1-69DA0A0B4J2H0 117 aa12.11□□□□□ -0.47
RPUSD3-215ENST00000475470 A0A1W2PPQ1 181 aa12.11□□□□□ -0.47
RPUSD3-215ENST00000475470 IGHV1-69P01742 117 aa12.11□□□□□ -0.47
RPUSD3-215ENST00000475470 EGR2P11161 476 aaPredicted RBP12.11□□□□□ -0.47
RPUSD3-215ENST00000475470 GNG7O60262 68 aa12.1□□□□□ -0.47
RPUSD3-215ENST00000475470 MFAP4P55083 255 aa12.1□□□□□ -0.47
RPUSD3-215ENST00000475470 LEMD1Q68G75 181 aa12.1□□□□□ -0.47
RPUSD3-215ENST00000475470 TEX38Q6PEX7 206 aa12.1□□□□□ -0.47
RPUSD3-215ENST00000475470 OR10G8Q8NGN5 311 aa12.1□□□□□ -0.47
RPUSD3-215ENST00000475470 BLNKQ8WV28 456 aa12.1□□□□□ -0.47
RPUSD3-215ENST00000475470 TRAV30A0A087WSZ9 112 aa12.1□□□□□ -0.47
RPUSD3-215ENST00000475470 TRAV40A0A0B4J280 105 aa12.1□□□□□ -0.47
RPUSD3-215ENST00000475470 K7EN84 100 aa12.1□□□□□ -0.47
RPUSD3-215ENST00000475470 RANP62826 216 aaKnown RBP12.1□□□□□ -0.47
RPUSD3-215ENST00000475470 ZNF329Q86UD4 541 aa12.1□□□□□ -0.47
RPUSD3-215ENST00000475470 HSPB9Q9BQS6 159 aa12.1□□□□□ -0.47
RPUSD3-215ENST00000475470 A1L4Q6 167 aa12.09□□□□□ -0.47
RPUSD3-215ENST00000475470 PPP5D1E7EU14 171 aa12.09□□□□□ -0.47
RPUSD3-215ENST00000475470 NBEAP1P0C6P0 100 aa12.09□□□□□ -0.47
RPUSD3-215ENST00000475470 DSCR9P59020 149 aa12.09□□□□□ -0.47
RPUSD3-215ENST00000475470 SLC25A39Q9BZJ4 359 aaPredicted RBP12.09□□□□□ -0.47
RPUSD3-215ENST00000475470 ZFYVE26Q68DK2 2539 aa12.09□□□□□ -0.47
RPUSD3-215ENST00000475470 MYO18BQ8IUG5 2567 aa12.09□□□□□ -0.47
RPUSD3-215ENST00000475470 OR2J3O76001 311 aa12.09□□□□□ -0.47
RPUSD3-215ENST00000475470 TOMM40O96008 361 aa12.09□□□□□ -0.47
RPUSD3-215ENST00000475470 FAM3BP58499 235 aaPredicted RBP12.09□□□□□ -0.47
RPUSD3-215ENST00000475470 SRSF1Q07955 248 aaKnown RBP eCLIP12.09□□□□□ -0.47
RPUSD3-215ENST00000475470 Q56UQ5 140 aa12.09□□□□□ -0.47
RPUSD3-215ENST00000475470 BRD3OSQ6XYD6 125 aa12.09□□□□□ -0.47
RPUSD3-215ENST00000475470 IMMP2LQ96T52 175 aa12.09□□□□□ -0.47
RPUSD3-215ENST00000475470 TMUB1Q9BVT8 246 aa12.09□□□□□ -0.47
RPUSD3-215ENST00000475470 SRD5A3Q9H8P0 318 aa12.09□□□□□ -0.47
RPUSD3-215ENST00000475470 MRPL27Q9P0M9 148 aaKnown RBP12.09□□□□□ -0.47
RPUSD3-215ENST00000475470 ABCA2Q9BZC7 2435 aa12.08□□□□□ -0.48
RPUSD3-215ENST00000475470 IFITM10A6NMD0 228 aa12.08□□□□□ -0.48
RPUSD3-215ENST00000475470 GGCTO75223 188 aaKnown RBP12.08□□□□□ -0.48
RPUSD3-215ENST00000475470 NDUFB8O95169 186 aa12.08□□□□□ -0.48
RPUSD3-215ENST00000475470 MSMBP08118 114 aa12.08□□□□□ -0.48
RPUSD3-215ENST00000475470 GP9P14770 177 aa12.08□□□□□ -0.48
RPUSD3-215ENST00000475470 HOXA5P20719 270 aa12.08□□□□□ -0.48
RPUSD3-215ENST00000475470 UNQ5815/PRO19632Q6UWF5 114 aa12.08□□□□□ -0.48
RPUSD3-215ENST00000475470 SGMS2Q8NHU3 365 aa12.08□□□□□ -0.48
RPUSD3-215ENST00000475470 C21orf62Q9NYP8 219 aa12.08□□□□□ -0.48
RPUSD3-215ENST00000475470 ZNF462Q96JM2 2506 aa12.08□□□□□ -0.48
RPUSD3-215ENST00000475470 CNN1P51911 297 aaKnown RBP12.08□□□□□ -0.48
RPUSD3-215ENST00000475470 ZNF48Q96MX3 618 aaPredicted RBP12.08□□□□□ -0.48
RPUSD3-215ENST00000475470 C7orf69Q9H7B7 122 aa12.08□□□□□ -0.48
RPUSD3-215ENST00000475470 A0A0U1RQK1 487 aa12.07□□□□□ -0.48
RPUSD3-215ENST00000475470 PEX7O00628 323 aa12.07□□□□□ -0.48
RPUSD3-215ENST00000475470 ATP6V0E1O15342 81 aa12.07□□□□□ -0.48
RPUSD3-215ENST00000475470 ERVFC1-1P60608 527 aa12.07□□□□□ -0.48
RPUSD3-215ENST00000475470 YPEL3P61236 119 aaPredicted RBP12.07□□□□□ -0.48
RPUSD3-215ENST00000475470 OR5I1Q13606 314 aa12.07□□□□□ -0.48
RPUSD3-215ENST00000475470 ECSCRQ19T08 205 aa12.07□□□□□ -0.48
RPUSD3-215ENST00000475470 FBXL7Q9UJT9 491 aa12.07□□□□□ -0.48
RPUSD3-215ENST00000475470 PGPA6NDG6 321 aa12.07□□□□□ -0.48
RPUSD3-215ENST00000475470 HIST1H2BKO60814 126 aa12.07□□□□□ -0.48
RPUSD3-215ENST00000475470 IL4P05112 153 aa12.07□□□□□ -0.48
RPUSD3-215ENST00000475470 HIST1H2BJP06899 126 aa12.07□□□□□ -0.48
RPUSD3-215ENST00000475470 HIST1H2BOP23527 126 aa12.07□□□□□ -0.48
RPUSD3-215ENST00000475470 HIST1H2BBP33778 126 aa12.07□□□□□ -0.48
RPUSD3-215ENST00000475470 MYCNOSP40205 109 aa12.07□□□□□ -0.48
RPUSD3-215ENST00000475470 HIST1H2BDP58876 126 aa12.07□□□□□ -0.48
RPUSD3-215ENST00000475470 TAS2R60P59551 318 aa12.07□□□□□ -0.48
RPUSD3-215ENST00000475470 HIST1H2BCP62807 126 aa12.07□□□□□ -0.48
RPUSD3-215ENST00000475470 FOXL1Q12952 345 aa12.07□□□□□ -0.48
RPUSD3-215ENST00000475470 HIST2H2BEQ16778 126 aa12.07□□□□□ -0.48
RPUSD3-215ENST00000475470 PDZD11Q5EBL8 140 aa12.07□□□□□ -0.48
RPUSD3-215ENST00000475470 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.07□□□□□ -0.48
RPUSD3-215ENST00000475470 ZNF600Q6ZNG1 722 aa12.07□□□□□ -0.48
RPUSD3-215ENST00000475470 ZNF491Q8N8L2 437 aa12.07□□□□□ -0.48
RPUSD3-215ENST00000475470 HIST1H2BHQ93079 126 aa12.07□□□□□ -0.48
RPUSD3-215ENST00000475470 RNF125Q96EQ8 232 aa12.07□□□□□ -0.48
RPUSD3-215ENST00000475470 HIST1H2BNQ99877 126 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms