RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 VN1R17PQ8TDU5 208 aa17.18■□□□□ 0.34
CCM2-206ENST00000474617 FANCD2OSQ96PS1 177 aa17.18■□□□□ 0.34
CCM2-206ENST00000474617 MEGF9Q9H1U4 602 aa17.18■□□□□ 0.34
CCM2-206ENST00000474617 MRPL27Q9P0M9 148 aaKnown RBP17.18■□□□□ 0.34
CCM2-206ENST00000474617 TRAV5A0A0B4J249 113 aa17.17■□□□□ 0.34
CCM2-206ENST00000474617 AP4M1O00189 453 aa17.17■□□□□ 0.34
CCM2-206ENST00000474617 UBE2CO00762 179 aa17.17■□□□□ 0.34
CCM2-206ENST00000474617 CNN1P51911 297 aaKnown RBP17.17■□□□□ 0.34
CCM2-206ENST00000474617 RPL19P84098 196 aaKnown RBP17.17■□□□□ 0.34
CCM2-206ENST00000474617 ASPHD1Q5U4P2 390 aa17.17■□□□□ 0.34
CCM2-206ENST00000474617 TEX38Q6PEX7 206 aa17.17■□□□□ 0.34
CCM2-206ENST00000474617 OCC1Q8TAD7 63 aa17.17■□□□□ 0.34
CCM2-206ENST00000474617 CACNA1BQ00975 2339 aa17.17■□□□□ 0.34
CCM2-206ENST00000474617 GNG7O60262 68 aa17.16■□□□□ 0.34
CCM2-206ENST00000474617 MSMBP08118 114 aa17.16■□□□□ 0.34
CCM2-206ENST00000474617 MORN5Q5VZ52 161 aa17.16■□□□□ 0.34
CCM2-206ENST00000474617 C19orf35Q6ZS72 473 aa17.16■□□□□ 0.34
CCM2-206ENST00000474617 ATP6V0BQ99437 205 aa17.16■□□□□ 0.34
CCM2-206ENST00000474617 C21orf62Q9NYP8 219 aa17.16■□□□□ 0.34
CCM2-206ENST00000474617 TRAV20A0A0B4J274 112 aa17.16■□□□□ 0.34
CCM2-206ENST00000474617 B4DSR2 109 aa17.16■□□□□ 0.34
CCM2-206ENST00000474617 NBEAP1P0C6P0 100 aa17.16■□□□□ 0.34
CCM2-206ENST00000474617 GP9P14770 177 aa17.16■□□□□ 0.34
CCM2-206ENST00000474617 MYCNOSP40205 109 aa17.16■□□□□ 0.34
CCM2-206ENST00000474617 PIP4P2Q8N4L2 257 aa17.16■□□□□ 0.34
CCM2-206ENST00000474617 ELOVL1Q9BW60 279 aa17.16■□□□□ 0.34
CCM2-206ENST00000474617 SLC25A39Q9BZJ4 359 aaPredicted RBP17.16■□□□□ 0.34
CCM2-206ENST00000474617 S100A8P05109 93 aa17.15■□□□□ 0.34
CCM2-206ENST00000474617 LYZP61626 148 aa17.15■□□□□ 0.34
CCM2-206ENST00000474617 NDPQ00604 133 aa17.15■□□□□ 0.34
CCM2-206ENST00000474617 CENPWQ5EE01 88 aa17.15■□□□□ 0.34
CCM2-206ENST00000474617 ZNF329Q86UD4 541 aa17.15■□□□□ 0.34
CCM2-206ENST00000474617 FAM103A1Q9BTL3 118 aaKnown RBP17.15■□□□□ 0.34
CCM2-206ENST00000474617 MOB4Q9Y3A3 225 aa17.15■□□□□ 0.34
CCM2-206ENST00000474617 IGHV3-21A0A0B4J1V1 117 aa17.14■□□□□ 0.33
CCM2-206ENST00000474617 WI2-2373I1.2A0A1W2PRP0 233 aa17.14■□□□□ 0.33
CCM2-206ENST00000474617 PEX7O00628 323 aa17.14■□□□□ 0.33
CCM2-206ENST00000474617 PYYP10082 97 aa17.14■□□□□ 0.33
CCM2-206ENST00000474617 HIST1H1EP10412 219 aaKnown RBP17.14■□□□□ 0.33
CCM2-206ENST00000474617 RUSC1-AS1Q66K80 236 aa17.14■□□□□ 0.33
CCM2-206ENST00000474617 BBC3Q96PG8 261 aaPredicted RBP17.14■□□□□ 0.33
CCM2-206ENST00000474617 SHANK2-AS3Q9BTD1 123 aa17.14■□□□□ 0.33
CCM2-206ENST00000474617 OSTCQ9NRP0 149 aa17.14■□□□□ 0.33
CCM2-206ENST00000474617 IGHV4-30-2A0A087WSY4 118 aa17.13■□□□□ 0.33
CCM2-206ENST00000474617 RNF224P0DH78 156 aa17.13■□□□□ 0.33
CCM2-206ENST00000474617 EGR2P11161 476 aaPredicted RBP17.13■□□□□ 0.33
CCM2-206ENST00000474617 SMUG1Q53HV7 270 aa17.13■□□□□ 0.33
CCM2-206ENST00000474617 BPIFA4PQ86YQ2 179 aa17.13■□□□□ 0.33
CCM2-206ENST00000474617 LYPD1Q8N2G4 141 aa17.13■□□□□ 0.33
CCM2-206ENST00000474617 C5orf17Q8NAS9 161 aa17.13■□□□□ 0.33
CCM2-206ENST00000474617 RNF125Q96EQ8 232 aa17.13■□□□□ 0.33
CCM2-206ENST00000474617 CHRDL1Q9BU40 450 aa17.13■□□□□ 0.33
CCM2-206ENST00000474617 WNK2Q9Y3S1 2297 aa17.13■□□□□ 0.33
CCM2-206ENST00000474617 M0QZK8 103 aa17.12■□□□□ 0.33
CCM2-206ENST00000474617 ISLRO14498 428 aa17.12■□□□□ 0.33
CCM2-206ENST00000474617 GCGP01275 180 aa17.12■□□□□ 0.33
CCM2-206ENST00000474617 CRIP2P52943 208 aaPredicted RBP17.12■□□□□ 0.33
CCM2-206ENST00000474617 SNRPEP62304 92 aaKnown RBP17.12■□□□□ 0.33
CCM2-206ENST00000474617 OR5T1Q8NG75 326 aa17.12■□□□□ 0.33
CCM2-206ENST00000474617 H3BRN7 92 aa17.11■□□□□ 0.33
CCM2-206ENST00000474617 FBLN7Q53RD9 439 aa17.11■□□□□ 0.33
CCM2-206ENST00000474617 FAM120AOSQ5T036 256 aa17.11■□□□□ 0.33
CCM2-206ENST00000474617 C5orf56Q8N8D9 126 aa17.11■□□□□ 0.33
CCM2-206ENST00000474617 ZNF491Q8N8L2 437 aa17.11■□□□□ 0.33
CCM2-206ENST00000474617 IGF2BP2-AS1Q96M15 143 aa17.11■□□□□ 0.33
CCM2-206ENST00000474617 OTORQ9NRC9 128 aa17.11■□□□□ 0.33
CCM2-206ENST00000474617 IL36BQ9NZH7 164 aa17.11■□□□□ 0.33
CCM2-206ENST00000474617 EPDR1Q9UM22 224 aa17.11■□□□□ 0.33
CCM2-206ENST00000474617 KLF12Q9Y4X4 402 aa17.11■□□□□ 0.33
CCM2-206ENST00000474617 A0A1W2PPQ1 181 aa17.11■□□□□ 0.33
CCM2-206ENST00000474617 TRGC2P03986 189 aa17.11■□□□□ 0.33
CCM2-206ENST00000474617 TMEM183BQ1AE95 376 aa17.11■□□□□ 0.33
CCM2-206ENST00000474617 Q56UQ5 140 aa17.11■□□□□ 0.33
CCM2-206ENST00000474617 OR4F17Q8NGA8 305 aa17.11■□□□□ 0.33
CCM2-206ENST00000474617 ATG101Q9BSB4 218 aa17.11■□□□□ 0.33
CCM2-206ENST00000474617 USP9XQ93008 2570 aaPredicted RBP17.1■□□□□ 0.33
CCM2-206ENST00000474617 J3QLI3 93 aa17.1■□□□□ 0.33
CCM2-206ENST00000474617 PRB1P04280 392 aa17.1■□□□□ 0.33
CCM2-206ENST00000474617 ERVFC1-1P60608 527 aa17.1■□□□□ 0.33
CCM2-206ENST00000474617 COX19Q49B96 90 aa17.1■□□□□ 0.33
CCM2-206ENST00000474617 ZNF600Q6ZNG1 722 aa17.1■□□□□ 0.33
CCM2-206ENST00000474617 NECAP1Q8NC96 275 aa17.1■□□□□ 0.33
CCM2-206ENST00000474617 TMUB1Q9BVT8 246 aa17.1■□□□□ 0.33
CCM2-206ENST00000474617 K7EN84 100 aa17.09■□□□□ 0.33
CCM2-206ENST00000474617 RAB9AP51151 201 aa17.09■□□□□ 0.33
CCM2-206ENST00000474617 PDE6HQ13956 83 aa17.09■□□□□ 0.33
CCM2-206ENST00000474617 UNQ5815/PRO19632Q6UWF5 114 aa17.09■□□□□ 0.33
CCM2-206ENST00000474617 FAM231DQ6ZW35 169 aa17.09■□□□□ 0.33
CCM2-206ENST00000474617 FMC1Q96HJ9 113 aa17.09■□□□□ 0.33
CCM2-206ENST00000474617 FBXL7Q9UJT9 491 aa17.09■□□□□ 0.33
CCM2-206ENST00000474617 PITPNC1Q9UKF7 332 aa17.09■□□□□ 0.33
CCM2-206ENST00000474617 MYO18BQ8IUG5 2567 aa17.08■□□□□ 0.33
CCM2-206ENST00000474617 TRBV9A0A0B4J1U6 114 aa17.08■□□□□ 0.32
CCM2-206ENST00000474617 TRAV40A0A0B4J280 105 aa17.08■□□□□ 0.32
CCM2-206ENST00000474617 NDUFB8O95169 186 aa17.08■□□□□ 0.32
CCM2-206ENST00000474617 BRI3O95415 125 aa17.08■□□□□ 0.32
CCM2-206ENST00000474617 IL4P05112 153 aa17.08■□□□□ 0.32
CCM2-206ENST00000474617 SLC25A5P05141 298 aaKnown RBP17.08■□□□□ 0.32
CCM2-206ENST00000474617 FABP9Q0Z7S8 132 aa17.08■□□□□ 0.32
CCM2-206ENST00000474617 CLEC12BQ2HXU8 276 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms