RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 TNFRSF13BO14836 293 aaPredicted RBP3.75□□□□□ -1.81
CCNL1-215ENST00000474539 MLNRO43193 412 aa3.75□□□□□ -1.81
CCNL1-215ENST00000474539 HOXA3O43365 443 aaPredicted RBP3.75□□□□□ -1.81
CCNL1-215ENST00000474539 DNAL4O96015 105 aa3.75□□□□□ -1.81
CCNL1-215ENST00000474539 HNRNPA3P51991 378 aaKnown RBP3.75□□□□□ -1.81
CCNL1-215ENST00000474539 DEFA6Q01524 100 aa3.75□□□□□ -1.81
CCNL1-215ENST00000474539 SRSF1Q07955 248 aaKnown RBP eCLIP3.75□□□□□ -1.816e-12■□□□□ 8.7
CCNL1-215ENST00000474539 ZNF506Q5JVG8 444 aa3.75□□□□□ -1.81
CCNL1-215ENST00000474539 BRD3OSQ6XYD6 125 aa3.75□□□□□ -1.81
CCNL1-215ENST00000474539 RASL10AQ92737 203 aa3.75□□□□□ -1.81
CCNL1-215ENST00000474539 SFRP2Q96HF1 295 aa3.75□□□□□ -1.81
CCNL1-215ENST00000474539 IMMP2LQ96T52 175 aa3.75□□□□□ -1.81
CCNL1-215ENST00000474539 C12orf57Q99622 126 aa3.75□□□□□ -1.81
CCNL1-215ENST00000474539 CHCHD5Q9BSY4 110 aa3.75□□□□□ -1.81
CCNL1-215ENST00000474539 OSTCQ9NRP0 149 aa3.75□□□□□ -1.81
CCNL1-215ENST00000474539 EPDR1Q9UM22 224 aa3.75□□□□□ -1.81
CCNL1-215ENST00000474539 HELZP42694 1942 aaKnown RBP3.75□□□□□ -1.81
CCNL1-215ENST00000474539 DOCK4Q8N1I0 1966 aa3.75□□□□□ -1.81
CCNL1-215ENST00000474539 A0A087WWC5 75 aa3.75□□□□□ -1.81
CCNL1-215ENST00000474539 A0A1W2PP11 408 aa3.75□□□□□ -1.81
CCNL1-215ENST00000474539 C15orf62A8K5M9 175 aa3.75□□□□□ -1.81
CCNL1-215ENST00000474539 CCL24O00175 119 aa3.75□□□□□ -1.81
CCNL1-215ENST00000474539 DANCRP0C864 163 aa3.75□□□□□ -1.81
CCNL1-215ENST00000474539 CCL20P78556 96 aa3.75□□□□□ -1.81
CCNL1-215ENST00000474539 ID3Q02535 119 aa3.75□□□□□ -1.81
CCNL1-215ENST00000474539 ORMDL3Q8N138 153 aa3.75□□□□□ -1.81
CCNL1-215ENST00000474539 ZNF502Q8TBZ5 544 aa3.75□□□□□ -1.81
CCNL1-215ENST00000474539 SLC25A39Q9BZJ4 359 aaPredicted RBP3.75□□□□□ -1.81
CCNL1-215ENST00000474539 PROK2Q9HC23 129 aa3.75□□□□□ -1.81
CCNL1-215ENST00000474539 JKAMPQ9P055 326 aa3.75□□□□□ -1.81
CCNL1-215ENST00000474539 PSG8Q9UQ74 426 aa3.75□□□□□ -1.81
CCNL1-215ENST00000474539 SMAD5-AS1Q9Y6J3 95 aa3.75□□□□□ -1.81
CCNL1-215ENST00000474539 ATG2BQ96BY7 2078 aa3.74□□□□□ -1.81
CCNL1-215ENST00000474539 ZNF98A6NK75 572 aa3.74□□□□□ -1.81
CCNL1-215ENST00000474539 J3QRE1 110 aa3.74□□□□□ -1.81
CCNL1-215ENST00000474539 FAM74A4Q5TZK3 123 aa3.74□□□□□ -1.81
CCNL1-215ENST00000474539 GTF2H5Q6ZYL4 71 aa3.74□□□□□ -1.81
CCNL1-215ENST00000474539 OR5A1Q8NGJ0 315 aa3.74□□□□□ -1.81
CCNL1-215ENST00000474539 NEUROG1Q92886 237 aa3.74□□□□□ -1.81
CCNL1-215ENST00000474539 VCX2Q9H322 139 aa3.74□□□□□ -1.81
CCNL1-215ENST00000474539 ZFC3H1O60293 1989 aaKnown RBP3.74□□□□□ -1.81
CCNL1-215ENST00000474539 TRAV2A0A0B4J234 112 aa3.74□□□□□ -1.81
CCNL1-215ENST00000474539 CRXO43186 299 aaPredicted RBP3.74□□□□□ -1.81
CCNL1-215ENST00000474539 SPART-AS1P0CW21 52 aa3.74□□□□□ -1.81
CCNL1-215ENST00000474539 SRSF6Q13247 344 aaKnown RBP3.74□□□□□ -1.81
CCNL1-215ENST00000474539 NPBQ8NG41 125 aa3.74□□□□□ -1.81
CCNL1-215ENST00000474539 TP53RKQ96S44 253 aa3.74□□□□□ -1.81
CCNL1-215ENST00000474539 PARP12Q9H0J9 701 aaKnown RBP3.74□□□□□ -1.81
CCNL1-215ENST00000474539 IGKV1-9A0A0C4DH69 117 aa3.74□□□□□ -1.81
CCNL1-215ENST00000474539 IGHV4-39P01824 125 aa3.74□□□□□ -1.81
CCNL1-215ENST00000474539 ZNF79Q15937 498 aa3.74□□□□□ -1.81
CCNL1-215ENST00000474539 TTC32Q5I0X7 151 aa3.74□□□□□ -1.81
CCNL1-215ENST00000474539 OR11H1Q8NG94 326 aa3.74□□□□□ -1.81
CCNL1-215ENST00000474539 OR11H2Q8NH07 326 aa3.74□□□□□ -1.81
CCNL1-215ENST00000474539 C4orf3Q8WVX3 66 aa3.74□□□□□ -1.81
CCNL1-215ENST00000474539 SLC25A2Q9BXI2 301 aa3.74□□□□□ -1.81
CCNL1-215ENST00000474539 TMEM14BQ9NUH8 114 aa3.74□□□□□ -1.81
CCNL1-215ENST00000474539 TMEM14CQ9P0S9 112 aa3.74□□□□□ -1.81
CCNL1-215ENST00000474539 TDRD6O60522 2096 aaKnown RBP3.74□□□□□ -1.81
CCNL1-215ENST00000474539 CKAP5Q14008 2032 aa3.74□□□□□ -1.81
CCNL1-215ENST00000474539 C5orf52A6NGY3 159 aa3.74□□□□□ -1.81
CCNL1-215ENST00000474539 SMIM9A6NGZ8 99 aa3.74□□□□□ -1.81
CCNL1-215ENST00000474539 DIRC3C9JPN6 131 aa3.74□□□□□ -1.81
CCNL1-215ENST00000474539 F8WEM9 126 aa3.74□□□□□ -1.81
CCNL1-215ENST00000474539 VCYO14598 125 aa3.74□□□□□ -1.81
CCNL1-215ENST00000474539 PRR31Q5SQ13 230 aa3.74□□□□□ -1.81
CCNL1-215ENST00000474539 TRPT1Q86TN4 253 aaKnown RBP3.74□□□□□ -1.81
CCNL1-215ENST00000474539 SHANK2-AS3Q9BTD1 123 aa3.74□□□□□ -1.81
CCNL1-215ENST00000474539 FAM103A1Q9BTL3 118 aaKnown RBP3.74□□□□□ -1.81
CCNL1-215ENST00000474539 ZNF319Q9P2F9 582 aa3.74□□□□□ -1.81
CCNL1-215ENST00000474539 GREB1Q4ZG55 1949 aa3.73□□□□□ -1.81
CCNL1-215ENST00000474539 TMSB15BA0A087X1C1 80 aa3.73□□□□□ -1.81
CCNL1-215ENST00000474539 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.73□□□□□ -1.81
CCNL1-215ENST00000474539 IGHV7-4-1A0A0J9YVY3 117 aa3.73□□□□□ -1.81
CCNL1-215ENST00000474539 FAM231BA6NCW3 169 aa3.73□□□□□ -1.81
CCNL1-215ENST00000474539 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.73□□□□□ -1.81
CCNL1-215ENST00000474539 H3BQ15 152 aa3.73□□□□□ -1.81
CCNL1-215ENST00000474539 CDK2AP2O75956 126 aa3.73□□□□□ -1.81
CCNL1-215ENST00000474539 NDUFB4O95168 129 aa3.73□□□□□ -1.81
CCNL1-215ENST00000474539 HOXB4P17483 251 aaPredicted RBP3.73□□□□□ -1.81
CCNL1-215ENST00000474539 TCL1AP56279 114 aa3.73□□□□□ -1.81
CCNL1-215ENST00000474539 KLRD1Q13241 179 aa3.73□□□□□ -1.81
CCNL1-215ENST00000474539 ABCA7Q8IZY2 2146 aa3.73□□□□□ -1.81
CCNL1-215ENST00000474539 C10orf126Q8N4M7 172 aa3.73□□□□□ -1.81
CCNL1-215ENST00000474539 PLEKHB2Q96CS7 222 aa3.73□□□□□ -1.81
CCNL1-215ENST00000474539 C16orf74Q96GX8 76 aa3.73□□□□□ -1.81
CCNL1-215ENST00000474539 SPATA25Q9BR10 227 aa3.73□□□□□ -1.81
CCNL1-215ENST00000474539 PYGO2Q9BRQ0 406 aa3.73□□□□□ -1.81
CCNL1-215ENST00000474539 GGTLC1Q9BX51 225 aa3.73□□□□□ -1.81
CCNL1-215ENST00000474539 PLXNA2O75051 1894 aa3.73□□□□□ -1.81
CCNL1-215ENST00000474539 NYNRINQ9P2P1 1898 aaKnown RBP3.73□□□□□ -1.81
CCNL1-215ENST00000474539 SCN3AQ9NY46 2000 aa3.73□□□□□ -1.81
CCNL1-215ENST00000474539 IZUMO1RA6ND01 250 aa3.73□□□□□ -1.81
CCNL1-215ENST00000474539 CRYBB3P26998 211 aa3.73□□□□□ -1.81
CCNL1-215ENST00000474539 CKS1BP61024 79 aa3.73□□□□□ -1.81
CCNL1-215ENST00000474539 INSL4Q14641 139 aa3.73□□□□□ -1.81
CCNL1-215ENST00000474539 RHOHQ15669 191 aa3.73□□□□□ -1.81
CCNL1-215ENST00000474539 DEFB112Q30KQ8 113 aa3.73□□□□□ -1.81
CCNL1-215ENST00000474539 TCTEX1D4Q5JR98 221 aa3.73□□□□□ -1.81
CCNL1-215ENST00000474539 DMRTA1Q5VZB9 504 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms