RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 RABAC1Q9UI14 185 aa10.34□□□□□ -0.75
USF1-205ENST00000473969 IGKV3-7A0A075B6H7 116 aa10.33□□□□□ -0.76
USF1-205ENST00000473969 IGHV3-66A0A0C4DH42 116 aa10.33□□□□□ -0.76
USF1-205ENST00000473969 DNASE2O00115 360 aaPredicted RBP10.33□□□□□ -0.76
USF1-205ENST00000473969 CFDP00746 253 aaPredicted RBP10.33□□□□□ -0.76
USF1-205ENST00000473969 NHLRC4P0CG21 123 aaPredicted RBP10.33□□□□□ -0.76
USF1-205ENST00000473969 CRYBB3P26998 211 aa10.33□□□□□ -0.76
USF1-205ENST00000473969 S100A7P31151 101 aa10.33□□□□□ -0.76
USF1-205ENST00000473969 NUP62P37198 522 aaPredicted RBP10.33□□□□□ -0.76
USF1-205ENST00000473969 PAX9P55771 341 aa10.33□□□□□ -0.76
USF1-205ENST00000473969 CMC4P56277 68 aaPredicted RBP10.33□□□□□ -0.76
USF1-205ENST00000473969 RRAS2P62070 204 aaPredicted RBP10.33□□□□□ -0.76
USF1-205ENST00000473969 DLK1P80370 383 aa10.33□□□□□ -0.76
USF1-205ENST00000473969 RAB32Q13637 225 aa10.33□□□□□ -0.76
USF1-205ENST00000473969 TMEM14EPQ6UXP3 125 aa10.33□□□□□ -0.76
USF1-205ENST00000473969 THAP8Q8NA92 274 aa10.33□□□□□ -0.76
USF1-205ENST00000473969 ZNF414Q96IQ9 312 aa10.33□□□□□ -0.76
USF1-205ENST00000473969 ASCL2Q99929 193 aa10.33□□□□□ -0.76
USF1-205ENST00000473969 VSIRQ9H7M9 311 aa10.33□□□□□ -0.76
USF1-205ENST00000473969 DNAH3Q8TD57 4116 aa10.33□□□□□ -0.76
USF1-205ENST00000473969 PRSS46E5RG02 174 aa10.32□□□□□ -0.76
USF1-205ENST00000473969 SIX6O95475 246 aa10.32□□□□□ -0.76
USF1-205ENST00000473969 APOHP02749 345 aaPredicted RBP10.32□□□□□ -0.76
USF1-205ENST00000473969 FRMD6-AS1P0C7T7 363 aa10.32□□□□□ -0.76
USF1-205ENST00000473969 TFPI2P48307 235 aa10.32□□□□□ -0.76
USF1-205ENST00000473969 LYZP61626 148 aa10.32□□□□□ -0.76
USF1-205ENST00000473969 ZNF90Q03938 601 aa10.32□□□□□ -0.76
USF1-205ENST00000473969 OR2F1Q13607 317 aa10.32□□□□□ -0.76
USF1-205ENST00000473969 TMEM144Q7Z5S9 345 aa10.32□□□□□ -0.76
USF1-205ENST00000473969 BPIFCQ8NFQ6 507 aa10.32□□□□□ -0.76
USF1-205ENST00000473969 PPP1R14BQ96C90 147 aa10.32□□□□□ -0.76
USF1-205ENST00000473969 RNF125Q96EQ8 232 aa10.32□□□□□ -0.76
USF1-205ENST00000473969 NMES1Q9C002 83 aa10.32□□□□□ -0.76
USF1-205ENST00000473969 NPVFQ9HCQ7 196 aa10.32□□□□□ -0.76
USF1-205ENST00000473969 HELTA6NFD8 242 aa10.31□□□□□ -0.76
USF1-205ENST00000473969 A8MZ25 164 aa10.31□□□□□ -0.76
USF1-205ENST00000473969 FNDC10F2Z333 226 aa10.31□□□□□ -0.76
USF1-205ENST00000473969 DFFBO76075 338 aa10.31□□□□□ -0.76
USF1-205ENST00000473969 P2RY1P47900 373 aa10.31□□□□□ -0.76
USF1-205ENST00000473969 AP2S1P53680 142 aaPredicted RBP10.31□□□□□ -0.76
USF1-205ENST00000473969 USF2Q15853 346 aaPredicted RBP10.31□□□□□ -0.76
USF1-205ENST00000473969 STX12Q86Y82 276 aa10.31□□□□□ -0.76
USF1-205ENST00000473969 WFDC3Q8IUB2 231 aa10.31□□□□□ -0.76
USF1-205ENST00000473969 GBGT1Q8N5D6 347 aa10.31□□□□□ -0.76
USF1-205ENST00000473969 DEFB125Q8N687 156 aa10.31□□□□□ -0.76
USF1-205ENST00000473969 GGACTQ9BVM4 153 aa10.31□□□□□ -0.76
USF1-205ENST00000473969 SRD5A3Q9H8P0 318 aa10.31□□□□□ -0.76
USF1-205ENST00000473969 IGKV1D-37A0A075B6S9 117 aa10.3□□□□□ -0.76
USF1-205ENST00000473969 FAM24AA6NFZ4 105 aa10.3□□□□□ -0.76
USF1-205ENST00000473969 PMS2P5A8MQ11 134 aa10.3□□□□□ -0.76
USF1-205ENST00000473969 DEDDO75618 318 aa10.3□□□□□ -0.76
USF1-205ENST00000473969 CCNKO75909 580 aa10.3□□□□□ -0.76
USF1-205ENST00000473969 PET100P0DJ07 73 aa10.3□□□□□ -0.76
USF1-205ENST00000473969 HBG1P69891 147 aa10.3□□□□□ -0.76
USF1-205ENST00000473969 HBG2P69892 147 aa10.3□□□□□ -0.76
USF1-205ENST00000473969 RGS21Q2M5E4 152 aa10.3□□□□□ -0.76
USF1-205ENST00000473969 LRRC37A5PQ49AS3 106 aa10.3□□□□□ -0.76
USF1-205ENST00000473969 FAM90A2PQ658T7 463 aa10.3□□□□□ -0.76
USF1-205ENST00000473969 TEPPQ6URK8 271 aa10.3□□□□□ -0.76
USF1-205ENST00000473969 LILRB2Q8N423 598 aa10.3□□□□□ -0.76
USF1-205ENST00000473969 ZMAT4Q9H898 229 aa10.3□□□□□ -0.76
USF1-205ENST00000473969 C19orf73Q9NVV2 129 aa10.3□□□□□ -0.76
USF1-205ENST00000473969 E5RGE8 158 aa10.29□□□□□ -0.76
USF1-205ENST00000473969 CST7O76096 145 aa10.29□□□□□ -0.76
USF1-205ENST00000473969 SELENOTP62341 195 aa10.29□□□□□ -0.76
USF1-205ENST00000473969 SLC38A11Q08AI6 406 aa10.29□□□□□ -0.76
USF1-205ENST00000473969 IL15RAQ13261 267 aa10.29□□□□□ -0.76
USF1-205ENST00000473969 RAB31Q13636 194 aa10.29□□□□□ -0.76
USF1-205ENST00000473969 CYP2G1PQ6ZSU1 146 aa10.29□□□□□ -0.76
USF1-205ENST00000473969 S100A7AQ86SG5 101 aa10.29□□□□□ -0.76
USF1-205ENST00000473969 STXBP6Q8NFX7 210 aa10.29□□□□□ -0.76
USF1-205ENST00000473969 SLC25A31Q9H0C2 315 aa10.29□□□□□ -0.76
USF1-205ENST00000473969 LYRM2Q9NU23 88 aaPredicted RBP10.29□□□□□ -0.76
USF1-205ENST00000473969 UBQLN2Q9UHD9 624 aa10.29□□□□□ -0.76
USF1-205ENST00000473969 ALG5Q9Y673 324 aa10.29□□□□□ -0.76
USF1-205ENST00000473969 IGKV1OR2-108A0A075B7D4 117 aa10.28□□□□□ -0.76
USF1-205ENST00000473969 ORM2P19652 201 aa10.28□□□□□ -0.76
USF1-205ENST00000473969 S100A11P31949 105 aa10.28□□□□□ -0.76
USF1-205ENST00000473969 SULT1A1P50225 295 aa10.28□□□□□ -0.76
USF1-205ENST00000473969 C16orf54Q6UWD8 224 aa10.28□□□□□ -0.76
USF1-205ENST00000473969 SBSPONQ8IVN8 264 aa10.28□□□□□ -0.76
USF1-205ENST00000473969 TMEM217Q8N7C4 229 aa10.28□□□□□ -0.76
USF1-205ENST00000473969 TMEM147Q9BVK8 224 aa10.28□□□□□ -0.76
USF1-205ENST00000473969 WFDC10AQ9H1F0 79 aa10.28□□□□□ -0.76
USF1-205ENST00000473969 MED28Q9H204 178 aa10.28□□□□□ -0.76
USF1-205ENST00000473969 MS4A6AQ9H2W1 248 aa10.28□□□□□ -0.76
USF1-205ENST00000473969 FBXL17Q9UF56 701 aa10.28□□□□□ -0.76
USF1-205ENST00000473969 U3KQE9 123 aa10.28□□□□□ -0.76
USF1-205ENST00000473969 TRAV2A0A0B4J234 112 aa10.27□□□□□ -0.77
USF1-205ENST00000473969 RAP2BP61225 183 aa10.27□□□□□ -0.77
USF1-205ENST00000473969 ATP6V1FQ16864 119 aa10.27□□□□□ -0.77
USF1-205ENST00000473969 TMEM252Q8N6L7 170 aa10.27□□□□□ -0.77
USF1-205ENST00000473969 OR1B1Q8NGR6 318 aa10.27□□□□□ -0.77
USF1-205ENST00000473969 FAM110AQ9BQ89 295 aa10.27□□□□□ -0.77
USF1-205ENST00000473969 UQCC1Q9NVA1 299 aa10.27□□□□□ -0.77
USF1-205ENST00000473969 LOC102724200A0A096LPH7 203 aaPredicted RBP10.26□□□□□ -0.77
USF1-205ENST00000473969 BUB3O43684 328 aa10.26□□□□□ -0.77
USF1-205ENST00000473969 GATA2P23769 480 aaPredicted RBP10.26□□□□□ -0.77
USF1-205ENST00000473969 H2BFSP57053 126 aa10.26□□□□□ -0.77
USF1-205ENST00000473969 ARL16Q0P5N6 197 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms