RNA–Protein interactions for RNA: ENST00000473334.1

PTP4A1-203, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 3

Gene PTP4A1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-203ENST00000473334 WRBO00258 174 aa16.6■□□□□ 0.25
PTP4A1-203ENST00000473334 ADAP1O75689 374 aa16.6■□□□□ 0.25
PTP4A1-203ENST00000473334 RPP30P78346 268 aaKnown RBP16.6■□□□□ 0.25
PTP4A1-203ENST00000473334 LEMD1Q68G75 181 aa16.6■□□□□ 0.25
PTP4A1-203ENST00000473334 OR51G1Q8NGK1 321 aa16.6■□□□□ 0.25
PTP4A1-203ENST00000473334 LYSTQ99698 3801 aa16.6■□□□□ 0.25
PTP4A1-203ENST00000473334 SACSQ9NZJ4 4579 aa16.6■□□□□ 0.25
PTP4A1-203ENST00000473334 TENM2Q9NT68 2774 aa16.6■□□□□ 0.25
PTP4A1-203ENST00000473334 MPTX1A8MV57 137 aa16.59■□□□□ 0.25
PTP4A1-203ENST00000473334 CNPY1Q3B7I2 92 aa16.59■□□□□ 0.25
PTP4A1-203ENST00000473334 DCANP1Q8TF63 244 aa16.59■□□□□ 0.25
PTP4A1-203ENST00000473334 RNF125Q96EQ8 232 aa16.59■□□□□ 0.25
PTP4A1-203ENST00000473334 IGKV1D-37A0A075B6S9 117 aa16.58■□□□□ 0.24
PTP4A1-203ENST00000473334 ANXA7P20073 488 aaKnown RBP16.58■□□□□ 0.24
PTP4A1-203ENST00000473334 AP2S1P53680 142 aaPredicted RBP16.58■□□□□ 0.24
PTP4A1-203ENST00000473334 C4orf46Q504U0 113 aa16.58■□□□□ 0.24
PTP4A1-203ENST00000473334 A0A0J9YWU9 116 aa16.57■□□□□ 0.24
PTP4A1-203ENST00000473334 BUB3O43684 328 aa16.57■□□□□ 0.24
PTP4A1-203ENST00000473334 IFNA21P01568 189 aa16.57■□□□□ 0.24
PTP4A1-203ENST00000473334 FABP1P07148 127 aa16.57■□□□□ 0.24
PTP4A1-203ENST00000473334 ZNF688P0C7X2 276 aa16.57■□□□□ 0.24
PTP4A1-203ENST00000473334 NUP62P37198 522 aaPredicted RBP16.57■□□□□ 0.24
PTP4A1-203ENST00000473334 ZNF90Q03938 601 aa16.57■□□□□ 0.24
PTP4A1-203ENST00000473334 PBDC1Q9BVG4 233 aa16.57■□□□□ 0.24
PTP4A1-203ENST00000473334 RYR2Q92736 4967 aa16.56■□□□□ 0.24
PTP4A1-203ENST00000473334 LCE6AA0A183 80 aa16.56■□□□□ 0.24
PTP4A1-203ENST00000473334 ID3Q02535 119 aa16.56■□□□□ 0.24
PTP4A1-203ENST00000473334 OR8G2PQ6IF36 304 aa16.56■□□□□ 0.24
PTP4A1-203ENST00000473334 STHQ8IWL8 128 aa16.56■□□□□ 0.24
PTP4A1-203ENST00000473334 GATAD1Q8WUU5 269 aa16.56■□□□□ 0.24
PTP4A1-203ENST00000473334 TRGV9Q99603 122 aa16.56■□□□□ 0.24
PTP4A1-203ENST00000473334 PRSS46E5RG02 174 aa16.55■□□□□ 0.24
PTP4A1-203ENST00000473334 PLA2G10O15496 165 aa16.55■□□□□ 0.24
PTP4A1-203ENST00000473334 LYRM1O43325 122 aa16.55■□□□□ 0.24
PTP4A1-203ENST00000473334 SPANXN5Q5MJ07 72 aa16.55■□□□□ 0.24
PTP4A1-203ENST00000473334 SIGLEC15Q6ZMC9 328 aa16.55■□□□□ 0.24
PTP4A1-203ENST00000473334 THAP8Q8NA92 274 aa16.55■□□□□ 0.24
PTP4A1-203ENST00000473334 OR4D5Q8NGN0 318 aa16.55■□□□□ 0.24
PTP4A1-203ENST00000473334 C20orf85Q9H1P6 137 aa16.55■□□□□ 0.24
PTP4A1-203ENST00000473334 PFDN2Q9UHV9 154 aa16.55■□□□□ 0.24
PTP4A1-203ENST00000473334 STRAPQ9Y3F4 350 aaKnown RBP16.55■□□□□ 0.24
PTP4A1-203ENST00000473334 H3BP45 60 aa16.54■□□□□ 0.24
PTP4A1-203ENST00000473334 CA1P00915 261 aaPredicted RBP16.54■□□□□ 0.24
PTP4A1-203ENST00000473334 NKX2-1P43699 371 aaPredicted RBP16.54■□□□□ 0.24
PTP4A1-203ENST00000473334 POLR2GP62487 172 aaKnown RBP eCLIP16.54■□□□□ 0.24
PTP4A1-203ENST00000473334 IGKV1OR2-108A0A075B7D4 117 aa16.53■□□□□ 0.24
PTP4A1-203ENST00000473334 LYZP61626 148 aa16.53■□□□□ 0.24
PTP4A1-203ENST00000473334 NRN1Q9NPD7 142 aa16.53■□□□□ 0.24
PTP4A1-203ENST00000473334 SNRPGP15A8MWD9 76 aa16.52■□□□□ 0.24
PTP4A1-203ENST00000473334 ATF4P18848 351 aaPredicted RBP16.52■□□□□ 0.24
PTP4A1-203ENST00000473334 OR2F1Q13607 317 aa16.52■□□□□ 0.24
PTP4A1-203ENST00000473334 TRPT1Q86TN4 253 aaKnown RBP16.52■□□□□ 0.24
PTP4A1-203ENST00000473334 MITD1Q8WV92 249 aa16.52■□□□□ 0.24
PTP4A1-203ENST00000473334 CCDC32Q9BV29 185 aa16.52■□□□□ 0.24
PTP4A1-203ENST00000473334 SEPSECSQ9HD40 501 aaKnown RBP16.52■□□□□ 0.24
PTP4A1-203ENST00000473334 AGRNO00468 2067 aa16.51■□□□□ 0.23
PTP4A1-203ENST00000473334 EWSR1Q01844 656 aaKnown RBP eCLIP16.51■□□□□ 0.231e-9■■■■■ 35.7
PTP4A1-203ENST00000473334 PSMG4Q5JS54 123 aa16.51■□□□□ 0.23
PTP4A1-203ENST00000473334 LINC00299Q6ZSB3 139 aa16.51■□□□□ 0.23
PTP4A1-203ENST00000473334 TMEM217Q8N7C4 229 aa16.51■□□□□ 0.23
PTP4A1-203ENST00000473334 RARRES2Q99969 163 aa16.51■□□□□ 0.23
PTP4A1-203ENST00000473334 PSENENQ9NZ42 101 aa16.51■□□□□ 0.23
PTP4A1-203ENST00000473334 KNCNA6PVL3 124 aa16.5■□□□□ 0.23
PTP4A1-203ENST00000473334 SSSCA1O60232 199 aa16.5■□□□□ 0.23
PTP4A1-203ENST00000473334 CFDP00746 253 aaPredicted RBP16.5■□□□□ 0.23
PTP4A1-203ENST00000473334 TCRBP04435 133 aa16.5■□□□□ 0.23
PTP4A1-203ENST00000473334 SNRPD3P62318 126 aaKnown RBP16.5■□□□□ 0.23
PTP4A1-203ENST00000473334 IAH1Q2TAA2 248 aaPredicted RBP16.5■□□□□ 0.23
PTP4A1-203ENST00000473334 ACOT7LQ6ZUV0 252 aa16.5■□□□□ 0.23
PTP4A1-203ENST00000473334 FBXL17Q9UF56 701 aa16.5■□□□□ 0.23
PTP4A1-203ENST00000473334 SPP1P10451 314 aa16.49■□□□□ 0.23
PTP4A1-203ENST00000473334 AKR1C1Q04828 323 aa16.49■□□□□ 0.23
PTP4A1-203ENST00000473334 ACTL10Q5JWF8 245 aa16.49■□□□□ 0.23
PTP4A1-203ENST00000473334 C1orf194Q5T5A4 169 aa16.49■□□□□ 0.23
PTP4A1-203ENST00000473334 MORN3Q6PF18 240 aaPredicted RBP16.49■□□□□ 0.23
PTP4A1-203ENST00000473334 ZBTB8BQ8NAP8 495 aaPredicted RBP16.49■□□□□ 0.23
PTP4A1-203ENST00000473334 OR11H2Q8NH07 326 aa16.49■□□□□ 0.23
PTP4A1-203ENST00000473334 SMIM8Q96KF7 97 aa16.49■□□□□ 0.23
PTP4A1-203ENST00000473334 CXorf65A6NEN9 183 aa16.48■□□□□ 0.23
PTP4A1-203ENST00000473334 SCGB1D2O95969 90 aa16.48■□□□□ 0.23
PTP4A1-203ENST00000473334 PMS2P11Q13670 270 aa16.48■□□□□ 0.23
PTP4A1-203ENST00000473334 TMEM41BQ5BJD5 291 aa16.48■□□□□ 0.23
PTP4A1-203ENST00000473334 PPP1R14BQ96C90 147 aa16.48■□□□□ 0.23
PTP4A1-203ENST00000473334 RAB40CQ96S21 281 aa16.48■□□□□ 0.23
PTP4A1-203ENST00000473334 TRAV6A0A075B6T7 132 aa16.47■□□□□ 0.23
PTP4A1-203ENST00000473334 JTBO76095 146 aa16.47■□□□□ 0.23
PTP4A1-203ENST00000473334 BPIFCQ8NFQ6 507 aa16.47■□□□□ 0.23
PTP4A1-203ENST00000473334 NUDT15Q9NV35 164 aa16.47■□□□□ 0.23
PTP4A1-203ENST00000473334 PLECQ15149 4684 aaKnown RBP16.46■□□□□ 0.23
PTP4A1-203ENST00000473334 PMS2P5A8MQ11 134 aa16.46■□□□□ 0.23
PTP4A1-203ENST00000473334 PAX9P55771 341 aa16.46■□□□□ 0.23
PTP4A1-203ENST00000473334 TMEM144Q7Z5S9 345 aa16.46■□□□□ 0.23
PTP4A1-203ENST00000473334 S100ZQ8WXG8 99 aa16.46■□□□□ 0.23
PTP4A1-203ENST00000473334 C11orf68Q9H3H3 251 aaKnown RBP16.46■□□□□ 0.23
PTP4A1-203ENST00000473334 GSKIPQ9P0R6 139 aa16.46■□□□□ 0.23
PTP4A1-203ENST00000473334 SLC45A2Q9UMX9 530 aa16.46■□□□□ 0.23
PTP4A1-203ENST00000473334 SMCO3A2RU48 225 aa16.45■□□□□ 0.22
PTP4A1-203ENST00000473334 GIG44P09565 113 aaPredicted RBP16.45■□□□□ 0.22
PTP4A1-203ENST00000473334 C4BPBP20851 252 aa16.45■□□□□ 0.22
PTP4A1-203ENST00000473334 TAS2R30P59541 319 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 148.9 ms