RNA–Protein interactions for RNA: ENST00000472490.1

BRCA1-211, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-211ENST00000472490 NEURL2Q9BR09 285 aa10.69□□□□□ -0.7
BRCA1-211ENST00000472490 GGACTQ9BVM4 153 aa10.69□□□□□ -0.7
BRCA1-211ENST00000472490 NMES1Q9C002 83 aa10.69□□□□□ -0.7
BRCA1-211ENST00000472490 VSIRQ9H7M9 311 aa10.69□□□□□ -0.7
BRCA1-211ENST00000472490 TUBA4BQ9H853 241 aa10.69□□□□□ -0.7
BRCA1-211ENST00000472490 MGAT4CQ9UBM8 478 aa10.69□□□□□ -0.7
BRCA1-211ENST00000472490 OR4C46A6NHA9 309 aa10.68□□□□□ -0.7
BRCA1-211ENST00000472490 A8MZ25 164 aa10.68□□□□□ -0.7
BRCA1-211ENST00000472490 IGHV4-30-4P0DP06 118 aa10.68□□□□□ -0.7
BRCA1-211ENST00000472490 S100A7P31151 101 aa10.68□□□□□ -0.7
BRCA1-211ENST00000472490 CAV2P51636 162 aa10.68□□□□□ -0.7
BRCA1-211ENST00000472490 RAB32Q13637 225 aa10.68□□□□□ -0.7
BRCA1-211ENST00000472490 TMEM144Q7Z5S9 345 aa10.68□□□□□ -0.7
BRCA1-211ENST00000472490 THAP8Q8NA92 274 aa10.68□□□□□ -0.7
BRCA1-211ENST00000472490 RABAC1Q9UI14 185 aa10.68□□□□□ -0.7
BRCA1-211ENST00000472490 IGHV3-49A0A0A0MS15 119 aa10.67□□□□□ -0.7
BRCA1-211ENST00000472490 SMCO3A2RU48 225 aa10.67□□□□□ -0.7
BRCA1-211ENST00000472490 HNRNPCP07910 306 aaKnown RBP eCLIP10.67□□□□□ -0.7
BRCA1-211ENST00000472490 NHLRC4P0CG21 123 aaPredicted RBP10.67□□□□□ -0.7
BRCA1-211ENST00000472490 CMC4P56277 68 aaPredicted RBP10.67□□□□□ -0.7
BRCA1-211ENST00000472490 RPL11P62913 178 aaKnown RBP10.67□□□□□ -0.7
BRCA1-211ENST00000472490 DLK1P80370 383 aa10.67□□□□□ -0.7
BRCA1-211ENST00000472490 IL15RAQ13261 267 aa10.67□□□□□ -0.7
BRCA1-211ENST00000472490 RGS21Q2M5E4 152 aa10.67□□□□□ -0.7
BRCA1-211ENST00000472490 RNF125Q96EQ8 232 aa10.67□□□□□ -0.7
BRCA1-211ENST00000472490 NPVFQ9HCQ7 196 aa10.67□□□□□ -0.7
BRCA1-211ENST00000472490 IGHV3OR16-13A0A075B7E8 117 aa10.66□□□□□ -0.7
BRCA1-211ENST00000472490 IGHV3-74A0A0B4J1X5 117 aa10.66□□□□□ -0.7
BRCA1-211ENST00000472490 PMS2P5A8MQ11 134 aa10.66□□□□□ -0.7
BRCA1-211ENST00000472490 OR11H12B2RN74 326 aa10.66□□□□□ -0.7
BRCA1-211ENST00000472490 DEDDO75618 318 aa10.66□□□□□ -0.7
BRCA1-211ENST00000472490 PET100P0DJ07 73 aa10.66□□□□□ -0.7
BRCA1-211ENST00000472490 AP2S1P53680 142 aaPredicted RBP10.66□□□□□ -0.7
BRCA1-211ENST00000472490 ZNF90Q03938 601 aa10.66□□□□□ -0.7
BRCA1-211ENST00000472490 TCF24Q7RTU0 167 aa10.66□□□□□ -0.7
BRCA1-211ENST00000472490 STX12Q86Y82 276 aa10.66□□□□□ -0.7
BRCA1-211ENST00000472490 ST8SIA2Q92186 375 aa10.66□□□□□ -0.7
BRCA1-211ENST00000472490 PBDC1Q9BVG4 233 aa10.66□□□□□ -0.7
BRCA1-211ENST00000472490 LYRM2Q9NU23 88 aaPredicted RBP10.66□□□□□ -0.7
BRCA1-211ENST00000472490 SELENOKQ9Y6D0 94 aa10.66□□□□□ -0.7
BRCA1-211ENST00000472490 IGKV1D-37A0A075B6S9 117 aa10.65□□□□□ -0.7
BRCA1-211ENST00000472490 IGHV3-66A0A0C4DH42 116 aa10.65□□□□□ -0.7
BRCA1-211ENST00000472490 HELTA6NFD8 242 aa10.65□□□□□ -0.7
BRCA1-211ENST00000472490 SIX6O95475 246 aa10.65□□□□□ -0.7
BRCA1-211ENST00000472490 APOHP02749 345 aaPredicted RBP10.65□□□□□ -0.7
BRCA1-211ENST00000472490 CD7P09564 240 aa10.65□□□□□ -0.7
BRCA1-211ENST00000472490 FRMD6-AS1P0C7T7 363 aa10.65□□□□□ -0.7
BRCA1-211ENST00000472490 P2RY1P47900 373 aa10.65□□□□□ -0.7
BRCA1-211ENST00000472490 RRAS2P62070 204 aaPredicted RBP10.65□□□□□ -0.7
BRCA1-211ENST00000472490 SELENOTP62341 195 aa10.65□□□□□ -0.7
BRCA1-211ENST00000472490 HBG1P69891 147 aa10.65□□□□□ -0.7
BRCA1-211ENST00000472490 HBG2P69892 147 aa10.65□□□□□ -0.7
BRCA1-211ENST00000472490 USF2Q15853 346 aaPredicted RBP10.65□□□□□ -0.7
BRCA1-211ENST00000472490 FAM90A2PQ658T7 463 aa10.65□□□□□ -0.7
BRCA1-211ENST00000472490 TEPPQ6URK8 271 aa10.65□□□□□ -0.7
BRCA1-211ENST00000472490 S100A7AQ86SG5 101 aa10.65□□□□□ -0.7
BRCA1-211ENST00000472490 BPIFCQ8NFQ6 507 aa10.65□□□□□ -0.7
BRCA1-211ENST00000472490 FAM110AQ9BQ89 295 aa10.65□□□□□ -0.7
BRCA1-211ENST00000472490 IGKV1OR2-108A0A075B7D4 117 aa10.64□□□□□ -0.71
BRCA1-211ENST00000472490 TRAV2A0A0B4J234 112 aa10.64□□□□□ -0.71
BRCA1-211ENST00000472490 E5RGE8 158 aa10.64□□□□□ -0.71
BRCA1-211ENST00000472490 DNASE2O00115 360 aaPredicted RBP10.64□□□□□ -0.71
BRCA1-211ENST00000472490 DFFBO76075 338 aa10.64□□□□□ -0.71
BRCA1-211ENST00000472490 S100A11P31949 105 aa10.64□□□□□ -0.71
BRCA1-211ENST00000472490 SULT1A1P50225 295 aa10.64□□□□□ -0.71
BRCA1-211ENST00000472490 H2BFSP57053 126 aa10.64□□□□□ -0.71
BRCA1-211ENST00000472490 LYZP61626 148 aa10.64□□□□□ -0.71
BRCA1-211ENST00000472490 LRRC37A5PQ49AS3 106 aa10.64□□□□□ -0.71
BRCA1-211ENST00000472490 SLC25A31Q9H0C2 315 aa10.64□□□□□ -0.71
BRCA1-211ENST00000472490 C19orf73Q9NVV2 129 aa10.64□□□□□ -0.71
BRCA1-211ENST00000472490 ALG5Q9Y673 324 aa10.64□□□□□ -0.71
BRCA1-211ENST00000472490 U3KQE9 123 aa10.64□□□□□ -0.71
BRCA1-211ENST00000472490 IGKV3-7A0A075B6H7 116 aa10.63□□□□□ -0.71
BRCA1-211ENST00000472490 SLC38A11Q08AI6 406 aa10.63□□□□□ -0.71
BRCA1-211ENST00000472490 OR2F1Q13607 317 aa10.63□□□□□ -0.71
BRCA1-211ENST00000472490 RAB31Q13636 194 aa10.63□□□□□ -0.71
BRCA1-211ENST00000472490 CYP2G1PQ6ZSU1 146 aa10.63□□□□□ -0.71
BRCA1-211ENST00000472490 LILRB2Q8N423 598 aa10.63□□□□□ -0.71
BRCA1-211ENST00000472490 TMEM252Q8N6L7 170 aa10.63□□□□□ -0.71
BRCA1-211ENST00000472490 PPP1R1CQ8WVI7 109 aa10.63□□□□□ -0.71
BRCA1-211ENST00000472490 PPP1R14BQ96C90 147 aa10.63□□□□□ -0.71
BRCA1-211ENST00000472490 C11orf1Q9H5F2 150 aa10.63□□□□□ -0.71
BRCA1-211ENST00000472490 SLC45A2Q9UMX9 530 aa10.63□□□□□ -0.71
BRCA1-211ENST00000472490 FAM24AA6NFZ4 105 aa10.62□□□□□ -0.71
BRCA1-211ENST00000472490 BUB3O43684 328 aa10.62□□□□□ -0.71
BRCA1-211ENST00000472490 CCNKO75909 580 aa10.62□□□□□ -0.71
BRCA1-211ENST00000472490 CST7O76096 145 aa10.62□□□□□ -0.71
BRCA1-211ENST00000472490 TFPI2P48307 235 aa10.62□□□□□ -0.71
BRCA1-211ENST00000472490 ATP6V1FQ16864 119 aa10.62□□□□□ -0.71
BRCA1-211ENST00000472490 C1orf194Q5T5A4 169 aa10.62□□□□□ -0.71
BRCA1-211ENST00000472490 C16orf54Q6UWD8 224 aa10.62□□□□□ -0.71
BRCA1-211ENST00000472490 DEFB125Q8N687 156 aa10.62□□□□□ -0.71
BRCA1-211ENST00000472490 TMEM217Q8N7C4 229 aa10.62□□□□□ -0.71
BRCA1-211ENST00000472490 MED28Q9H204 178 aa10.62□□□□□ -0.71
BRCA1-211ENST00000472490 MS4A6AQ9H2W1 248 aa10.62□□□□□ -0.71
BRCA1-211ENST00000472490 UQCC1Q9NVA1 299 aa10.62□□□□□ -0.71
BRCA1-211ENST00000472490 FBXL17Q9UF56 701 aa10.62□□□□□ -0.71
BRCA1-211ENST00000472490 RNF24Q9Y225 148 aa10.62□□□□□ -0.71
BRCA1-211ENST00000472490 BAXQ07812 192 aa10.61□□□□□ -0.71
BRCA1-211ENST00000472490 ARL16Q0P5N6 197 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms