RNA–Protein interactions for RNA: ENST00000472116.1

CDHR3-209, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 993 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-209ENST00000472116 ZNF98A6NK75 572 aa6.9□□□□□ -1.3
CDHR3-209ENST00000472116 M0R2Z0 102 aa6.9□□□□□ -1.3
CDHR3-209ENST00000472116 ISLRO14498 428 aa6.9□□□□□ -1.3
CDHR3-209ENST00000472116 DUSP14O95147 198 aaKnown RBP6.9□□□□□ -1.3
CDHR3-209ENST00000472116 GAS8-AS1O95177 125 aa6.9□□□□□ -1.3
CDHR3-209ENST00000472116 RLN2P04090 185 aa6.9□□□□□ -1.3
CDHR3-209ENST00000472116 HOXA5P20719 270 aa6.9□□□□□ -1.3
CDHR3-209ENST00000472116 TAS2R60P59551 318 aa6.9□□□□□ -1.3
CDHR3-209ENST00000472116 HERV-K104P61576 105 aa6.9□□□□□ -1.3
CDHR3-209ENST00000472116 HSPE1P61604 102 aaKnown RBP6.9□□□□□ -1.3
CDHR3-209ENST00000472116 CDNFQ49AH0 187 aa6.9□□□□□ -1.3
CDHR3-209ENST00000472116 ZNF493Q6ZR52 646 aa6.9□□□□□ -1.3
CDHR3-209ENST00000472116 H2BFWTQ7Z2G1 175 aa6.9□□□□□ -1.3
CDHR3-209ENST00000472116 Q8N814 137 aa6.9□□□□□ -1.3
CDHR3-209ENST00000472116 NUDCD2Q8WVJ2 157 aa6.9□□□□□ -1.3
CDHR3-209ENST00000472116 RBPMSQ93062 196 aaKnown RBP6.9□□□□□ -1.3
CDHR3-209ENST00000472116 WDR12Q9GZL7 423 aaKnown RBP6.9□□□□□ -1.3
CDHR3-209ENST00000472116 ELF5Q9UKW6 265 aaPredicted RBP6.9□□□□□ -1.3
CDHR3-209ENST00000472116 CASQ2O14958 399 aaPredicted RBP6.89□□□□□ -1.31
CDHR3-209ENST00000472116 IGKV1-17P01599 117 aa6.89□□□□□ -1.31
CDHR3-209ENST00000472116 ZNF182P17025 639 aaPredicted RBP6.89□□□□□ -1.31
CDHR3-209ENST00000472116 CALRP27797 417 aaKnown RBP6.89□□□□□ -1.31
CDHR3-209ENST00000472116 CBX5P45973 191 aa6.89□□□□□ -1.31
CDHR3-209ENST00000472116 OR10A3P58181 314 aa6.89□□□□□ -1.31
CDHR3-209ENST00000472116 RPS25P62851 125 aaKnown RBP6.89□□□□□ -1.31
CDHR3-209ENST00000472116 DHODHQ02127 395 aa6.89□□□□□ -1.31
CDHR3-209ENST00000472116 Q6ZSA8 131 aa6.89□□□□□ -1.31
CDHR3-209ENST00000472116 SCXQ7RTU7 201 aa6.89□□□□□ -1.31
CDHR3-209ENST00000472116 BAP18Q8IXM2 172 aa6.89□□□□□ -1.31
CDHR3-209ENST00000472116 C10orf126Q8N4M7 172 aa6.89□□□□□ -1.31
CDHR3-209ENST00000472116 TMEM263Q8WUH6 116 aaKnown RBP6.89□□□□□ -1.31
CDHR3-209ENST00000472116 PDCD10Q9BUL8 212 aa6.89□□□□□ -1.31
CDHR3-209ENST00000472116 ENY2Q9NPA8 101 aa6.89□□□□□ -1.31
CDHR3-209ENST00000472116 TRAV5A0A0B4J249 113 aa6.88□□□□□ -1.31
CDHR3-209ENST00000472116 GAGE12BA1L429 117 aa6.88□□□□□ -1.31
CDHR3-209ENST00000472116 GAGE7O76087 117 aa6.88□□□□□ -1.31
CDHR3-209ENST00000472116 GAGE12FP0CL80 117 aa6.88□□□□□ -1.31
CDHR3-209ENST00000472116 GAGE12GP0CL81 117 aa6.88□□□□□ -1.31
CDHR3-209ENST00000472116 GAGE12IP0CL82 117 aa6.88□□□□□ -1.31
CDHR3-209ENST00000472116 ETV6P41212 452 aa6.88□□□□□ -1.31
CDHR3-209ENST00000472116 HSPA13P48723 471 aa6.88□□□□□ -1.31
CDHR3-209ENST00000472116 YPEL3P61236 119 aaPredicted RBP6.88□□□□□ -1.31
CDHR3-209ENST00000472116 ACOT6Q3I5F7 207 aaPredicted RBP6.88□□□□□ -1.31
CDHR3-209ENST00000472116 SPINK9Q5DT21 86 aa6.88□□□□□ -1.31
CDHR3-209ENST00000472116 IDNKQ5T6J7 187 aa6.88□□□□□ -1.31
CDHR3-209ENST00000472116 NANOGP1Q8N7R0 232 aa6.88□□□□□ -1.31
CDHR3-209ENST00000472116 OR11H7Q8NGC8 314 aa6.88□□□□□ -1.31
CDHR3-209ENST00000472116 GPR146Q96CH1 333 aa6.88□□□□□ -1.31
CDHR3-209ENST00000472116 C16orf92Q96LL3 132 aa6.88□□□□□ -1.31
CDHR3-209ENST00000472116 LINC00467Q9BRT7 94 aa6.88□□□□□ -1.31
CDHR3-209ENST00000472116 C9orf16Q9BUW7 83 aa6.88□□□□□ -1.31
CDHR3-209ENST00000472116 PPP1R14DQ9NXH3 145 aa6.88□□□□□ -1.31
CDHR3-209ENST00000472116 MRPL36Q9P0J6 103 aaKnown RBP6.88□□□□□ -1.31
CDHR3-209ENST00000472116 ICOSQ9Y6W8 199 aa6.88□□□□□ -1.31
CDHR3-209ENST00000472116 TMEM235A6NFC5 223 aa6.87□□□□□ -1.31
CDHR3-209ENST00000472116 SNURFLB1AK76 121 aa6.87□□□□□ -1.31
CDHR3-209ENST00000472116 CRXO43186 299 aaPredicted RBP6.87□□□□□ -1.31
CDHR3-209ENST00000472116 PAX4O43316 350 aa6.87□□□□□ -1.31
CDHR3-209ENST00000472116 UCP1P25874 307 aa6.87□□□□□ -1.31
CDHR3-209ENST00000472116 PSMB9P28065 219 aa6.87□□□□□ -1.31
CDHR3-209ENST00000472116 OR10J1P30954 320 aa6.87□□□□□ -1.31
CDHR3-209ENST00000472116 RPL5P46777 297 aaKnown RBP6.87□□□□□ -1.31
CDHR3-209ENST00000472116 MEOX2P50222 304 aa6.87□□□□□ -1.31
CDHR3-209ENST00000472116 KRTAP10-4P60372 401 aaPredicted RBP6.87□□□□□ -1.31
CDHR3-209ENST00000472116 GAMTQ14353 236 aa6.87□□□□□ -1.31
CDHR3-209ENST00000472116 AMTNQ6UX39 209 aa6.87□□□□□ -1.31
CDHR3-209ENST00000472116 CCDC28AQ8IWP9 274 aa6.87□□□□□ -1.31
CDHR3-209ENST00000472116 LRTM2Q8N967 370 aa6.87□□□□□ -1.31
CDHR3-209ENST00000472116 BEST4Q8NFU0 473 aa6.87□□□□□ -1.31
CDHR3-209ENST00000472116 MND1Q9BWT6 205 aa6.87□□□□□ -1.31
CDHR3-209ENST00000472116 TRAV12-2A0A075B6T6 113 aa6.86□□□□□ -1.31
CDHR3-209ENST00000472116 LRCOL1A6NCL2 159 aa6.86□□□□□ -1.31
CDHR3-209ENST00000472116 A8MTW9 85 aa6.86□□□□□ -1.31
CDHR3-209ENST00000472116 BOLA2-SMG1P6H3BVE0 249 aa6.86□□□□□ -1.31
CDHR3-209ENST00000472116 PDCD5O14737 125 aa6.86□□□□□ -1.31
CDHR3-209ENST00000472116 PGLYRP1O75594 196 aaPredicted RBP6.86□□□□□ -1.31
CDHR3-209ENST00000472116 SCGNO76038 276 aa6.86□□□□□ -1.31
CDHR3-209ENST00000472116 IGLC1P0CG04 106 aa6.86□□□□□ -1.31
CDHR3-209ENST00000472116 RD3LP0DJH9 198 aa6.86□□□□□ -1.31
CDHR3-209ENST00000472116 S100GP29377 79 aa6.86□□□□□ -1.31
CDHR3-209ENST00000472116 CNN1P51911 297 aaKnown RBP6.86□□□□□ -1.31
CDHR3-209ENST00000472116 RND2P52198 227 aa6.86□□□□□ -1.31
CDHR3-209ENST00000472116 RPL37AP61513 92 aaKnown RBP6.86□□□□□ -1.31
CDHR3-209ENST00000472116 TRAM1Q15629 374 aa6.86□□□□□ -1.31
CDHR3-209ENST00000472116 AHSA2Q719I0 299 aa6.86□□□□□ -1.31
CDHR3-209ENST00000472116 UFD1Q92890 307 aa6.86□□□□□ -1.31
CDHR3-209ENST00000472116 PPP1R14BQ96C90 147 aa6.86□□□□□ -1.31
CDHR3-209ENST00000472116 PBDC1Q9BVG4 233 aa6.86□□□□□ -1.31
CDHR3-209ENST00000472116 DNAJC4Q9NNZ3 241 aa6.86□□□□□ -1.31
CDHR3-209ENST00000472116 SOCS3O14543 225 aa6.85□□□□□ -1.31
CDHR3-209ENST00000472116 CIB2O75838 187 aa6.85□□□□□ -1.31
CDHR3-209ENST00000472116 CRYGDP07320 174 aa6.85□□□□□ -1.31
CDHR3-209ENST00000472116 RNASE2P10153 161 aaKnown RBP6.85□□□□□ -1.31
CDHR3-209ENST00000472116 SLC25A4P12235 298 aa6.85□□□□□ -1.31
CDHR3-209ENST00000472116 PTHLHP12272 177 aa6.85□□□□□ -1.31
CDHR3-209ENST00000472116 ELK1P19419 428 aa6.85□□□□□ -1.31
CDHR3-209ENST00000472116 PSMA1P25786 263 aaKnown RBP6.85□□□□□ -1.31
CDHR3-209ENST00000472116 ASAH1Q13510 395 aa6.85□□□□□ -1.31
CDHR3-209ENST00000472116 MLANAQ16655 118 aa6.85□□□□□ -1.31
CDHR3-209ENST00000472116 C10orf67Q8IYJ2 551 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms