RNA–Protein interactions for RNA: ENST00000471812.5

GGPS1-204, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2

Gene GGPS1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-204ENST00000471812 LEMD1Q68G75 181 aa6.95□□□□□ -1.3
GGPS1-204ENST00000471812 TMEM182Q6ZP80 229 aaPredicted RBP6.95□□□□□ -1.3
GGPS1-204ENST00000471812 SLC16A13Q7RTY0 426 aa6.95□□□□□ -1.3
GGPS1-204ENST00000471812 CENPSQ8N2Z9 138 aa6.95□□□□□ -1.3
GGPS1-204ENST00000471812 LRTM2Q8N967 370 aa6.95□□□□□ -1.3
GGPS1-204ENST00000471812 GGTLC1Q9BX51 225 aa6.95□□□□□ -1.3
GGPS1-204ENST00000471812 MS4A6AQ9H2W1 248 aa6.95□□□□□ -1.3
GGPS1-204ENST00000471812 LOC102724200A0A096LPH7 203 aaPredicted RBP6.94□□□□□ -1.3
GGPS1-204ENST00000471812 PRSS46E5RG02 174 aa6.94□□□□□ -1.3
GGPS1-204ENST00000471812 CCSO14618 274 aa6.94□□□□□ -1.3
GGPS1-204ENST00000471812 CRYBB3P26998 211 aa6.94□□□□□ -1.3
GGPS1-204ENST00000471812 OR10J1P30954 320 aa6.94□□□□□ -1.3
GGPS1-204ENST00000471812 P2RY1P47900 373 aa6.94□□□□□ -1.3
GGPS1-204ENST00000471812 SUB1P53999 127 aaKnown RBP eCLIP6.94□□□□□ -1.3
GGPS1-204ENST00000471812 DHRS2Q13268 280 aa6.94□□□□□ -1.3
GGPS1-204ENST00000471812 GAMTQ14353 236 aa6.94□□□□□ -1.3
GGPS1-204ENST00000471812 SCGB3A2Q96PL1 93 aa6.94□□□□□ -1.3
GGPS1-204ENST00000471812 SLC25A21Q9BQT8 299 aaPredicted RBP6.94□□□□□ -1.3
GGPS1-204ENST00000471812 KNCNA6PVL3 124 aa6.93□□□□□ -1.3
GGPS1-204ENST00000471812 C3orf84H3BNL1 204 aa6.93□□□□□ -1.3
GGPS1-204ENST00000471812 WRBO00258 174 aa6.93□□□□□ -1.3
GGPS1-204ENST00000471812 OR4E1P0C645 316 aa6.93□□□□□ -1.3
GGPS1-204ENST00000471812 PRB4P10163 310 aaPredicted RBP6.93□□□□□ -1.3
GGPS1-204ENST00000471812 PSG1P11464 419 aa6.93□□□□□ -1.3
GGPS1-204ENST00000471812 GATA2P23769 480 aaPredicted RBP6.93□□□□□ -1.3
GGPS1-204ENST00000471812 DEFB131AP59861 70 aa6.93□□□□□ -1.3
GGPS1-204ENST00000471812 POLR2GP62487 172 aaKnown RBP eCLIP6.93□□□□□ -1.3
GGPS1-204ENST00000471812 OR2F1Q13607 317 aa6.93□□□□□ -1.3
GGPS1-204ENST00000471812 CNPY1Q3B7I2 92 aa6.93□□□□□ -1.3
GGPS1-204ENST00000471812 LAMTOR1Q6IAA8 161 aa6.93□□□□□ -1.3
GGPS1-204ENST00000471812 OR51G1Q8NGK1 321 aa6.93□□□□□ -1.3
GGPS1-204ENST00000471812 RNASEH2CQ8TDP1 164 aaKnown RBP6.93□□□□□ -1.3
GGPS1-204ENST00000471812 GLMPQ8WWB7 406 aa6.93□□□□□ -1.3
GGPS1-204ENST00000471812 SEC22CQ9BRL7 303 aa6.93□□□□□ -1.3
GGPS1-204ENST00000471812 TBC1D24Q9ULP9 559 aa6.93□□□□□ -1.3
GGPS1-204ENST00000471812 TRAV6A0A075B6T7 132 aa6.92□□□□□ -1.3
GGPS1-204ENST00000471812 OR4C46A6NHA9 309 aa6.92□□□□□ -1.3
GGPS1-204ENST00000471812 PMS2P5A8MQ11 134 aa6.92□□□□□ -1.3
GGPS1-204ENST00000471812 K7EQG2 157 aa6.92□□□□□ -1.3
GGPS1-204ENST00000471812 CORTO00230 105 aa6.92□□□□□ -1.3
GGPS1-204ENST00000471812 IFNA4P05014 189 aa6.92□□□□□ -1.3
GGPS1-204ENST00000471812 IL4P05112 153 aa6.92□□□□□ -1.3
GGPS1-204ENST00000471812 GIG44P09565 113 aaPredicted RBP6.92□□□□□ -1.3
GGPS1-204ENST00000471812 ZNF688P0C7X2 276 aa6.92□□□□□ -1.3
GGPS1-204ENST00000471812 ANXA3P12429 323 aa6.92□□□□□ -1.3
GGPS1-204ENST00000471812 LYL1P12980 280 aa6.92□□□□□ -1.3
GGPS1-204ENST00000471812 PAX9P55771 341 aa6.92□□□□□ -1.3
GGPS1-204ENST00000471812 IFITM3Q01628 133 aa6.92□□□□□ -1.3
GGPS1-204ENST00000471812 C16orf54Q6UWD8 224 aa6.92□□□□□ -1.3
GGPS1-204ENST00000471812 LYG2Q86SG7 212 aa6.92□□□□□ -1.3
GGPS1-204ENST00000471812 STXBP6Q8NFX7 210 aa6.92□□□□□ -1.3
GGPS1-204ENST00000471812 OR4D5Q8NGN0 318 aa6.92□□□□□ -1.3
GGPS1-204ENST00000471812 OR1S2Q8NGQ3 325 aa6.92□□□□□ -1.3
GGPS1-204ENST00000471812 DCANP1Q8TF63 244 aa6.92□□□□□ -1.3
GGPS1-204ENST00000471812 C17orf77Q96MU5 243 aa6.92□□□□□ -1.3
GGPS1-204ENST00000471812 GINS3Q9BRX5 216 aa6.92□□□□□ -1.3
GGPS1-204ENST00000471812 RABAC1Q9UI14 185 aa6.92□□□□□ -1.3
GGPS1-204ENST00000471812 PAIP2BQ9ULR5 123 aaKnown RBP6.92□□□□□ -1.3
GGPS1-204ENST00000471812 A0A0J9YWU9 116 aa6.91□□□□□ -1.3
GGPS1-204ENST00000471812 DUXBA0A1W2PPF3 345 aa6.91□□□□□ -1.3
GGPS1-204ENST00000471812 RPS10-NUDT3A0A1W2PQS6 291 aa6.91□□□□□ -1.3
GGPS1-204ENST00000471812 LYRM1O43325 122 aa6.91□□□□□ -1.3
GGPS1-204ENST00000471812 SYNGR2O43760 224 aa6.91□□□□□ -1.3
GGPS1-204ENST00000471812 TOMM40O96008 361 aa6.91□□□□□ -1.3
GGPS1-204ENST00000471812 SLC25A4P12235 298 aa6.91□□□□□ -1.3
GGPS1-204ENST00000471812 C4BPBP20851 252 aa6.91□□□□□ -1.3
GGPS1-204ENST00000471812 NPPCP23582 126 aa6.91□□□□□ -1.3
GGPS1-204ENST00000471812 YPEL3P61236 119 aaPredicted RBP6.91□□□□□ -1.3
GGPS1-204ENST00000471812 SRPXP78539 464 aa6.91□□□□□ -1.3
GGPS1-204ENST00000471812 ARL16Q0P5N6 197 aa6.91□□□□□ -1.3
GGPS1-204ENST00000471812 TEPPQ6URK8 271 aa6.91□□□□□ -1.3
GGPS1-204ENST00000471812 METTL26Q96S19 204 aa6.91□□□□□ -1.3
GGPS1-204ENST00000471812 C20orf85Q9H1P6 137 aa6.91□□□□□ -1.3
GGPS1-204ENST00000471812 RCL1Q9Y2P8 373 aaKnown RBP6.91□□□□□ -1.3
GGPS1-204ENST00000471812 TMED3Q9Y3Q3 217 aa6.91□□□□□ -1.3
GGPS1-204ENST00000471812 U3KQ87 197 aa6.91□□□□□ -1.3
GGPS1-204ENST00000471812 VPS13DQ5THJ4 4388 aa6.9□□□□□ -1.3
GGPS1-204ENST00000471812 NAP1L6A6NFF2 107 aa6.9□□□□□ -1.3
GGPS1-204ENST00000471812 DEFB4AO15263 64 aa6.9□□□□□ -1.3
GGPS1-204ENST00000471812 SSSCA1O60232 199 aa6.9□□□□□ -1.3
GGPS1-204ENST00000471812 HNRNPCP07910 306 aaKnown RBP eCLIP6.9□□□□□ -1.3
GGPS1-204ENST00000471812 RD3LP0DJH9 198 aa6.9□□□□□ -1.3
GGPS1-204ENST00000471812 SLC25A6P12236 298 aa6.9□□□□□ -1.3
GGPS1-204ENST00000471812 INPP1P49441 399 aa6.9□□□□□ -1.3
GGPS1-204ENST00000471812 CT83Q5H943 113 aa6.9□□□□□ -1.3
GGPS1-204ENST00000471812 SPANXN5Q5MJ07 72 aa6.9□□□□□ -1.3
GGPS1-204ENST00000471812 RNF125Q96EQ8 232 aa6.9□□□□□ -1.3
GGPS1-204ENST00000471812 PBDC1Q9BVG4 233 aa6.9□□□□□ -1.3
GGPS1-204ENST00000471812 WDR12Q9GZL7 423 aaKnown RBP6.9□□□□□ -1.3
GGPS1-204ENST00000471812 KMT2AQ03164 3969 aa6.9□□□□□ -1.3
GGPS1-204ENST00000471812 TRAV30A0A087WSZ9 112 aa6.89□□□□□ -1.31
GGPS1-204ENST00000471812 KRTAP4-8A0A0G2JLE6 195 aa6.89□□□□□ -1.31
GGPS1-204ENST00000471812 DNASE2O00115 360 aaPredicted RBP6.89□□□□□ -1.31
GGPS1-204ENST00000471812 SPRY2O43597 315 aa6.89□□□□□ -1.31
GGPS1-204ENST00000471812 BUB3O43684 328 aa6.89□□□□□ -1.31
GGPS1-204ENST00000471812 TCRBP04435 133 aa6.89□□□□□ -1.31
GGPS1-204ENST00000471812 LYZP61626 148 aa6.89□□□□□ -1.31
GGPS1-204ENST00000471812 PMS2P11Q13670 270 aa6.89□□□□□ -1.31
GGPS1-204ENST00000471812 C4orf46Q504U0 113 aa6.89□□□□□ -1.31
GGPS1-204ENST00000471812 GDF5OSQ5U4N7 250 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms