RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 ACOT7LQ6ZUV0 252 aa11.46□□□□□ -0.57
SDC3-203ENST00000471567 ST8SIA2Q92186 375 aa11.46□□□□□ -0.57
SDC3-203ENST00000471567 GGACTQ9BVM4 153 aa11.46□□□□□ -0.57
SDC3-203ENST00000471567 C19orf73Q9NVV2 129 aa11.46□□□□□ -0.57
SDC3-203ENST00000471567 U3KQE9 123 aa11.46□□□□□ -0.57
SDC3-203ENST00000471567 IGKV1OR2-108A0A075B7D4 117 aa11.45□□□□□ -0.58
SDC3-203ENST00000471567 IGHV3OR16-13A0A075B7E8 117 aa11.45□□□□□ -0.58
SDC3-203ENST00000471567 IGHV3-74A0A0B4J1X5 117 aa11.45□□□□□ -0.58
SDC3-203ENST00000471567 OR4C46A6NHA9 309 aa11.45□□□□□ -0.58
SDC3-203ENST00000471567 SIX6O95475 246 aa11.45□□□□□ -0.58
SDC3-203ENST00000471567 S100A10P60903 97 aa11.45□□□□□ -0.58
SDC3-203ENST00000471567 ZNF90Q03938 601 aa11.45□□□□□ -0.58
SDC3-203ENST00000471567 AKR1C1Q04828 323 aa11.45□□□□□ -0.58
SDC3-203ENST00000471567 TCF24Q7RTU0 167 aa11.45□□□□□ -0.58
SDC3-203ENST00000471567 RNF125Q96EQ8 232 aa11.45□□□□□ -0.58
SDC3-203ENST00000471567 GRAMD2BQ96HH9 432 aa11.45□□□□□ -0.58
SDC3-203ENST00000471567 DEDDO75618 318 aa11.44□□□□□ -0.58
SDC3-203ENST00000471567 CCNKO75909 580 aa11.44□□□□□ -0.58
SDC3-203ENST00000471567 RLN2P04090 185 aa11.44□□□□□ -0.58
SDC3-203ENST00000471567 FRMD6-AS1P0C7T7 363 aa11.44□□□□□ -0.58
SDC3-203ENST00000471567 NHLRC4P0CG21 123 aaPredicted RBP11.44□□□□□ -0.58
SDC3-203ENST00000471567 BCAP31P51572 246 aa11.44□□□□□ -0.58
SDC3-203ENST00000471567 CAV2P51636 162 aa11.44□□□□□ -0.58
SDC3-203ENST00000471567 PAFAH1B2P68402 229 aa11.44□□□□□ -0.58
SDC3-203ENST00000471567 USF2Q15853 346 aaPredicted RBP11.44□□□□□ -0.58
SDC3-203ENST00000471567 LILRB2Q8N423 598 aa11.44□□□□□ -0.58
SDC3-203ENST00000471567 TUBA4BQ9H853 241 aa11.44□□□□□ -0.58
SDC3-203ENST00000471567 NPVFQ9HCQ7 196 aa11.44□□□□□ -0.58
SDC3-203ENST00000471567 LYRM2Q9NU23 88 aaPredicted RBP11.44□□□□□ -0.58
SDC3-203ENST00000471567 MGAT4CQ9UBM8 478 aa11.44□□□□□ -0.58
SDC3-203ENST00000471567 PFDN2Q9UHV9 154 aa11.44□□□□□ -0.58
SDC3-203ENST00000471567 RABAC1Q9UI14 185 aa11.44□□□□□ -0.58
SDC3-203ENST00000471567 TGP01266 2768 aa11.44□□□□□ -0.58
SDC3-203ENST00000471567 IGHV3-66A0A0C4DH42 116 aa11.43□□□□□ -0.58
SDC3-203ENST00000471567 SMCO3A2RU48 225 aa11.43□□□□□ -0.58
SDC3-203ENST00000471567 OR11H12B2RN74 326 aa11.43□□□□□ -0.58
SDC3-203ENST00000471567 DFFBO76075 338 aa11.43□□□□□ -0.58
SDC3-203ENST00000471567 NUP62P37198 522 aaPredicted RBP11.43□□□□□ -0.58
SDC3-203ENST00000471567 P2RY1P47900 373 aa11.43□□□□□ -0.58
SDC3-203ENST00000471567 CMC4P56277 68 aaPredicted RBP11.43□□□□□ -0.58
SDC3-203ENST00000471567 H2BFSP57053 126 aa11.43□□□□□ -0.58
SDC3-203ENST00000471567 FAM110AQ9BQ89 295 aa11.43□□□□□ -0.58
SDC3-203ENST00000471567 ALG5Q9Y673 324 aa11.43□□□□□ -0.58
SDC3-203ENST00000471567 TRAV2A0A0B4J234 112 aa11.42□□□□□ -0.58
SDC3-203ENST00000471567 FAM24AA6NFZ4 105 aa11.42□□□□□ -0.58
SDC3-203ENST00000471567 EIF2B2P49770 351 aaKnown RBP11.42□□□□□ -0.58
SDC3-203ENST00000471567 RRAS2P62070 204 aaPredicted RBP11.42□□□□□ -0.58
SDC3-203ENST00000471567 ARL16Q0P5N6 197 aa11.42□□□□□ -0.58
SDC3-203ENST00000471567 OR2F1Q13607 317 aa11.42□□□□□ -0.58
SDC3-203ENST00000471567 RGS21Q2M5E4 152 aa11.42□□□□□ -0.58
SDC3-203ENST00000471567 C16orf54Q6UWD8 224 aa11.42□□□□□ -0.58
SDC3-203ENST00000471567 BPIFCQ8NFQ6 507 aa11.42□□□□□ -0.58
SDC3-203ENST00000471567 HELTA6NFD8 242 aa11.41□□□□□ -0.58
SDC3-203ENST00000471567 E5RGE8 158 aa11.41□□□□□ -0.58
SDC3-203ENST00000471567 BUB3O43684 328 aa11.41□□□□□ -0.58
SDC3-203ENST00000471567 SULT1A1P50225 295 aa11.41□□□□□ -0.58
SDC3-203ENST00000471567 AP2S1P53680 142 aaPredicted RBP11.41□□□□□ -0.58
SDC3-203ENST00000471567 LYZP61626 148 aa11.41□□□□□ -0.58
SDC3-203ENST00000471567 SELENOTP62341 195 aa11.41□□□□□ -0.58
SDC3-203ENST00000471567 TEPPQ6URK8 271 aa11.41□□□□□ -0.58
SDC3-203ENST00000471567 DEFB125Q8N687 156 aa11.41□□□□□ -0.58
SDC3-203ENST00000471567 TMEM252Q8N6L7 170 aa11.41□□□□□ -0.58
SDC3-203ENST00000471567 PBDC1Q9BVG4 233 aa11.41□□□□□ -0.58
SDC3-203ENST00000471567 SLC45A2Q9UMX9 530 aa11.41□□□□□ -0.58
SDC3-203ENST00000471567 DNASE2O00115 360 aaPredicted RBP11.4□□□□□ -0.58
SDC3-203ENST00000471567 CST7O76096 145 aa11.4□□□□□ -0.58
SDC3-203ENST00000471567 S100A7P31151 101 aa11.4□□□□□ -0.58
SDC3-203ENST00000471567 S100A11P31949 105 aa11.4□□□□□ -0.58
SDC3-203ENST00000471567 RPL11P62913 178 aaKnown RBP11.4□□□□□ -0.58
SDC3-203ENST00000471567 HBG1P69891 147 aa11.4□□□□□ -0.58
SDC3-203ENST00000471567 HBG2P69892 147 aa11.4□□□□□ -0.58
SDC3-203ENST00000471567 SLC38A11Q08AI6 406 aa11.4□□□□□ -0.58
SDC3-203ENST00000471567 C1orf194Q5T5A4 169 aa11.4□□□□□ -0.58
SDC3-203ENST00000471567 LINC00322Q6ZN03 302 aaPredicted RBP11.4□□□□□ -0.58
SDC3-203ENST00000471567 CYP2G1PQ6ZSU1 146 aa11.4□□□□□ -0.58
SDC3-203ENST00000471567 STX12Q86Y82 276 aa11.4□□□□□ -0.58
SDC3-203ENST00000471567 SBSPONQ8IVN8 264 aa11.4□□□□□ -0.58
SDC3-203ENST00000471567 PPP1R1CQ8WVI7 109 aa11.4□□□□□ -0.58
SDC3-203ENST00000471567 GLMPQ8WWB7 406 aa11.4□□□□□ -0.58
SDC3-203ENST00000471567 ASCL2Q99929 193 aa11.4□□□□□ -0.58
SDC3-203ENST00000471567 MS4A6AQ9H2W1 248 aa11.4□□□□□ -0.58
SDC3-203ENST00000471567 SRD5A3Q9H8P0 318 aa11.4□□□□□ -0.58
SDC3-203ENST00000471567 IGKV3-7A0A075B6H7 116 aa11.39□□□□□ -0.59
SDC3-203ENST00000471567 IGSF23A1L1A6 192 aa11.39□□□□□ -0.59
SDC3-203ENST00000471567 PET100P0DJ07 73 aa11.39□□□□□ -0.59
SDC3-203ENST00000471567 ATP6V1FQ16864 119 aa11.39□□□□□ -0.59
SDC3-203ENST00000471567 ODF3L2Q3SX64 289 aa11.39□□□□□ -0.59
SDC3-203ENST00000471567 LRRC37A5PQ49AS3 106 aa11.39□□□□□ -0.59
SDC3-203ENST00000471567 GBGT1Q8N5D6 347 aa11.39□□□□□ -0.59
SDC3-203ENST00000471567 SLC25A31Q9H0C2 315 aa11.39□□□□□ -0.59
SDC3-203ENST00000471567 WFDC10AQ9H1F0 79 aa11.39□□□□□ -0.59
SDC3-203ENST00000471567 H0YIZ8 118 aa11.38□□□□□ -0.59
SDC3-203ENST00000471567 GATA2P23769 480 aaPredicted RBP11.38□□□□□ -0.59
SDC3-203ENST00000471567 TFPI2P48307 235 aa11.38□□□□□ -0.59
SDC3-203ENST00000471567 PLP1P60201 277 aa11.38□□□□□ -0.59
SDC3-203ENST00000471567 OXA1LQ15070 435 aa11.38□□□□□ -0.59
SDC3-203ENST00000471567 VWC2Q2TAL6 325 aa11.38□□□□□ -0.59
SDC3-203ENST00000471567 TMEM182Q6ZP80 229 aaPredicted RBP11.38□□□□□ -0.59
SDC3-203ENST00000471567 TMEM217Q8N7C4 229 aa11.38□□□□□ -0.59
SDC3-203ENST00000471567 MED28Q9H204 178 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 118.9 ms