RNA–Protein interactions for RNA: ENST00000471414.1

COPS3-206, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-206ENST00000471414 TRAV4A0A0B4J268 109 aa0.64□□□□□ -2.31
COPS3-206ENST00000471414 FAM159BA6NKW6 160 aa0.64□□□□□ -2.31
COPS3-206ENST00000471414 CYBAP13498 195 aa0.64□□□□□ -2.31
COPS3-206ENST00000471414 HSD11B1P28845 292 aa0.64□□□□□ -2.31
COPS3-206ENST00000471414 SRIP30626 198 aa0.64□□□□□ -2.31
COPS3-206ENST00000471414 ZNF93P35789 620 aaPredicted RBP0.64□□□□□ -2.31
COPS3-206ENST00000471414 RHOBP62745 196 aa0.64□□□□□ -2.31
COPS3-206ENST00000471414 EIF5AP63241 154 aaKnown RBP0.64□□□□□ -2.31
COPS3-206ENST00000471414 CTAG1AP78358 180 aa0.64□□□□□ -2.31
COPS3-206ENST00000471414 ESRGQ1W209 222 aa0.64□□□□□ -2.31
COPS3-206ENST00000471414 OR2T10Q8NGZ9 312 aa0.64□□□□□ -2.31
COPS3-206ENST00000471414 ZNF418Q8TF45 676 aaPredicted RBP0.64□□□□□ -2.31
COPS3-206ENST00000471414 MRPL57Q9BQC6 102 aaKnown RBP0.64□□□□□ -2.31
COPS3-206ENST00000471414 ENY2Q9NPA8 101 aa0.64□□□□□ -2.31
COPS3-206ENST00000471414 UTP11Q9Y3A2 253 aaKnown RBP0.64□□□□□ -2.31
COPS3-206ENST00000471414 FAM32AQ9Y421 112 aaKnown RBP0.64□□□□□ -2.31
COPS3-206ENST00000471414 ADGRL3Q9HAR2 1447 aa0.64□□□□□ -2.31
COPS3-206ENST00000471414 POLEQ07864 2286 aa0.63□□□□□ -2.31
COPS3-206ENST00000471414 UBR2Q8IWV8 1755 aa0.63□□□□□ -2.31
COPS3-206ENST00000471414 TRBV19A0A075B6N1 114 aa0.63□□□□□ -2.31
COPS3-206ENST00000471414 TRBV6-7A0A0A0MS04 114 aa0.63□□□□□ -2.31
COPS3-206ENST00000471414 TRBV6-8A0A0A6YYG3 113 aa0.63□□□□□ -2.31
COPS3-206ENST00000471414 CLDN25C9JDP6 229 aa0.63□□□□□ -2.31
COPS3-206ENST00000471414 SERPINA1P01009 418 aa0.63□□□□□ -2.31
COPS3-206ENST00000471414 RNASE4P34096 147 aaKnown RBP0.63□□□□□ -2.31
COPS3-206ENST00000471414 SRP14P37108 136 aaKnown RBP0.63□□□□□ -2.31
COPS3-206ENST00000471414 SERPINB9P50453 376 aa0.63□□□□□ -2.31
COPS3-206ENST00000471414 PIGPP57054 158 aa0.63□□□□□ -2.31
COPS3-206ENST00000471414 MRPS25P82663 173 aaKnown RBP0.63□□□□□ -2.31
COPS3-206ENST00000471414 TMED2Q15363 201 aa0.63□□□□□ -2.31
COPS3-206ENST00000471414 DEFB113Q30KQ7 82 aa0.63□□□□□ -2.31
COPS3-206ENST00000471414 C1orf137Q5JT78 98 aa0.63□□□□□ -2.31
COPS3-206ENST00000471414 GOLT1AQ6ZVE7 132 aa0.63□□□□□ -2.31
COPS3-206ENST00000471414 FAM19A2Q8N3H0 131 aa0.63□□□□□ -2.31
COPS3-206ENST00000471414 C3orf56Q8N813 242 aa0.63□□□□□ -2.31
COPS3-206ENST00000471414 LINC00301Q8NCQ3 95 aa0.63□□□□□ -2.31
COPS3-206ENST00000471414 OR10X1Q8NGY0 326 aa0.63□□□□□ -2.31
COPS3-206ENST00000471414 TEX47Q8TBZ9 253 aa0.63□□□□□ -2.31
COPS3-206ENST00000471414 DGCR14Q96DF8 476 aaKnown RBP0.63□□□□□ -2.31
COPS3-206ENST00000471414 SLAMF6Q96DU3 332 aa0.63□□□□□ -2.31
COPS3-206ENST00000471414 BCL2L10Q9HD36 194 aa0.63□□□□□ -2.31
COPS3-206ENST00000471414 RASL12Q9NYN1 266 aa0.63□□□□□ -2.31
COPS3-206ENST00000471414 OPTCQ9UBM4 332 aa0.63□□□□□ -2.31
COPS3-206ENST00000471414 C22orf24Q9Y442 160 aa0.63□□□□□ -2.31
COPS3-206ENST00000471414 TENM3Q9P273 2699 aa0.63□□□□□ -2.31
COPS3-206ENST00000471414 M0R2N4 97 aa0.62□□□□□ -2.31
COPS3-206ENST00000471414 ATP5HO75947 161 aa0.62□□□□□ -2.31
COPS3-206ENST00000471414 HOXA6P31267 233 aa0.62□□□□□ -2.31
COPS3-206ENST00000471414 CAPZBP47756 277 aa0.62□□□□□ -2.31
COPS3-206ENST00000471414 ATP5G3P48201 142 aa0.62□□□□□ -2.31
COPS3-206ENST00000471414 HSPE1P61604 102 aaKnown RBP0.62□□□□□ -2.31
COPS3-206ENST00000471414 CNBPP62633 177 aaKnown RBP0.62□□□□□ -2.31
COPS3-206ENST00000471414 DYNLT1P63172 113 aa0.62□□□□□ -2.31
COPS3-206ENST00000471414 MRPS15P82914 257 aaKnown RBP0.62□□□□□ -2.31
COPS3-206ENST00000471414 KRR1Q13601 381 aaKnown RBP0.62□□□□□ -2.31
COPS3-206ENST00000471414 RRN3P1Q2M238 152 aa0.62□□□□□ -2.31
COPS3-206ENST00000471414 DEFB115Q30KQ5 88 aa0.62□□□□□ -2.31
COPS3-206ENST00000471414 Q8N814 137 aa0.62□□□□□ -2.31
COPS3-206ENST00000471414 SLC30A7Q8NEW0 376 aa0.62□□□□□ -2.31
COPS3-206ENST00000471414 LINC00526Q96FQ7 95 aa0.62□□□□□ -2.31
COPS3-206ENST00000471414 OBSCN-AS1Q96MR7 158 aa0.62□□□□□ -2.31
COPS3-206ENST00000471414 PRADC1Q9BSG0 188 aa0.62□□□□□ -2.31
COPS3-206ENST00000471414 C9orf16Q9BUW7 83 aa0.62□□□□□ -2.31
COPS3-206ENST00000471414 IMUPQ9GZP8 106 aa0.62□□□□□ -2.31
COPS3-206ENST00000471414 C6orf62Q9GZU0 229 aaPredicted RBP0.62□□□□□ -2.31
COPS3-206ENST00000471414 C14orf132Q9NPU4 83 aa0.62□□□□□ -2.31
COPS3-206ENST00000471414 ACER3Q9NUN7 267 aa0.62□□□□□ -2.31
COPS3-206ENST00000471414 ARMC1Q9NVT9 282 aa0.62□□□□□ -2.31
COPS3-206ENST00000471414 MYH10P35580 1976 aa0.62□□□□□ -2.31
COPS3-206ENST00000471414 TNRC6AQ8NDV7 1962 aaKnown RBP0.62□□□□□ -2.31
COPS3-206ENST00000471414 CACNA1BQ00975 2339 aa0.62□□□□□ -2.31
COPS3-206ENST00000471414 SCN3AQ9NY46 2000 aa0.62□□□□□ -2.31
COPS3-206ENST00000471414 ADGRB2O60241 1585 aa0.62□□□□□ -2.31
COPS3-206ENST00000471414 MCM3APO60318 1980 aa0.61□□□□□ -2.31
COPS3-206ENST00000471414 DIDO1Q9BTC0 2240 aaKnown RBP0.61□□□□□ -2.31
COPS3-206ENST00000471414 TRGV10A0A0A0MS01 117 aa0.61□□□□□ -2.31
COPS3-206ENST00000471414 HMGB3O15347 200 aaKnown RBP0.61□□□□□ -2.31
COPS3-206ENST00000471414 GADD45GO95257 159 aa0.61□□□□□ -2.31
COPS3-206ENST00000471414 IFNA7P01567 189 aa0.61□□□□□ -2.31
COPS3-206ENST00000471414 C22orf39Q6P5X5 142 aa0.61□□□□□ -2.31
COPS3-206ENST00000471414 S100A7AQ86SG5 101 aa0.61□□□□□ -2.31
COPS3-206ENST00000471414 STAG3L4Q8TBR4 150 aa0.61□□□□□ -2.31
COPS3-206ENST00000471414 C4orf3Q8WVX3 66 aa0.61□□□□□ -2.31
COPS3-206ENST00000471414 YPEL2Q96QA6 119 aa0.61□□□□□ -2.31
COPS3-206ENST00000471414 PHB2Q99623 299 aa0.61□□□□□ -2.31
COPS3-206ENST00000471414 LINC00467Q9BRT7 94 aa0.61□□□□□ -2.31
COPS3-206ENST00000471414 TMEM126AQ9H061 195 aa0.61□□□□□ -2.31
COPS3-206ENST00000471414 ZFP30Q9Y2G7 519 aa0.61□□□□□ -2.31
COPS3-206ENST00000471414 ARL5AQ9Y689 179 aa0.61□□□□□ -2.31
COPS3-206ENST00000471414 TECTAO75443 2155 aa0.61□□□□□ -2.31
COPS3-206ENST00000471414 SCN8AQ9UQD0 1980 aa0.61□□□□□ -2.31
COPS3-206ENST00000471414 CCDC160A6NGH7 325 aa0.6□□□□□ -2.31
COPS3-206ENST00000471414 ZNF736B4DX44 427 aaPredicted RBP0.6□□□□□ -2.31
COPS3-206ENST00000471414 INE1O15225 51 aa0.6□□□□□ -2.31
COPS3-206ENST00000471414 TIMM17BO60830 172 aa0.6□□□□□ -2.31
COPS3-206ENST00000471414 DHFRP00374 187 aa0.6□□□□□ -2.31
COPS3-206ENST00000471414 C1QBP02746 253 aa0.6□□□□□ -2.31
COPS3-206ENST00000471414 ARF6P62330 175 aa0.6□□□□□ -2.31
COPS3-206ENST00000471414 TAF1AQ15573 450 aaPredicted RBP0.6□□□□□ -2.31
COPS3-206ENST00000471414 BCL2L15Q5TBC7 163 aa0.6□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms