RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 PRADC1Q9BSG0 188 aa3.02□□□□□ -1.93
SMC5-202ENST00000471372 TMEM126AQ9H061 195 aa3.02□□□□□ -1.93
SMC5-202ENST00000471372 OR52A1Q9UKL2 312 aa3.02□□□□□ -1.93
SMC5-202ENST00000471372 TRGC2P03986 189 aa3.01□□□□□ -1.93
SMC5-202ENST00000471372 NBEAP1P0C6P0 100 aa3.01□□□□□ -1.93
SMC5-202ENST00000471372 UBBP0CG47 229 aa3.01□□□□□ -1.93
SMC5-202ENST00000471372 C22orf39Q6P5X5 142 aa3.01□□□□□ -1.93
SMC5-202ENST00000471372 KRTAP5-5Q701N2 237 aaPredicted RBP3.01□□□□□ -1.93
SMC5-202ENST00000471372 PDZD9Q8IXQ8 264 aa3.01□□□□□ -1.93
SMC5-202ENST00000471372 YPEL2Q96QA6 119 aa3.01□□□□□ -1.93
SMC5-202ENST00000471372 C8orf4Q9NR00 106 aa3.01□□□□□ -1.93
SMC5-202ENST00000471372 TRAV3A0A0B4J244 114 aa3□□□□□ -1.93
SMC5-202ENST00000471372 C7orf71A4D174 169 aa3□□□□□ -1.93
SMC5-202ENST00000471372 GGCTO75223 188 aaKnown RBP3□□□□□ -1.93
SMC5-202ENST00000471372 DYNLT1P63172 113 aa3□□□□□ -1.93
SMC5-202ENST00000471372 RHOGP84095 191 aa3□□□□□ -1.93
SMC5-202ENST00000471372 FKBP1CQ5VVH2 108 aa3□□□□□ -1.93
SMC5-202ENST00000471372 ZNF826PQ6ZT77 177 aa3□□□□□ -1.93
SMC5-202ENST00000471372 PHF13Q86YI8 300 aaPredicted RBP3□□□□□ -1.93
SMC5-202ENST00000471372 DENND4CQ5VZ89 1909 aa2.99□□□□□ -1.93
SMC5-202ENST00000471372 TRGV10A0A0A0MS01 117 aa2.99□□□□□ -1.93
SMC5-202ENST00000471372 NDUFB3O43676 98 aa2.99□□□□□ -1.93
SMC5-202ENST00000471372 S100GP29377 79 aa2.99□□□□□ -1.93
SMC5-202ENST00000471372 DYNLT3P51808 116 aa2.99□□□□□ -1.93
SMC5-202ENST00000471372 BRMS1LQ5PSV4 323 aa2.99□□□□□ -1.93
SMC5-202ENST00000471372 YIPF3Q9GZM5 350 aa2.99□□□□□ -1.93
SMC5-202ENST00000471372 CST9LQ9H4G1 147 aa2.99□□□□□ -1.93
SMC5-202ENST00000471372 SMARCA4P51532 1647 aa2.99□□□□□ -1.93
SMC5-202ENST00000471372 RIMBP3CA6NJZ7 1639 aa2.98□□□□□ -1.93
SMC5-202ENST00000471372 RIMBP3BA6NNM3 1639 aa2.98□□□□□ -1.93
SMC5-202ENST00000471372 RIMBP3Q9UFD9 1639 aa2.98□□□□□ -1.93
SMC5-202ENST00000471372 TRAV1-1A0A0B4J248 108 aa2.98□□□□□ -1.93
SMC5-202ENST00000471372 ODAMA1E959 279 aa2.98□□□□□ -1.93
SMC5-202ENST00000471372 CXCL1P09341 107 aa2.98□□□□□ -1.93
SMC5-202ENST00000471372 ZNF846Q147U1 533 aa2.98□□□□□ -1.93
SMC5-202ENST00000471372 KRTAP6-3Q3LI67 103 aa2.98□□□□□ -1.93
SMC5-202ENST00000471372 TMEM128Q5BJH2 165 aa2.98□□□□□ -1.93
SMC5-202ENST00000471372 SLC30A7Q8NEW0 376 aa2.98□□□□□ -1.93
SMC5-202ENST00000471372 OR4D11Q8NGI4 311 aa2.98□□□□□ -1.93
SMC5-202ENST00000471372 OR2T10Q8NGZ9 312 aa2.98□□□□□ -1.93
SMC5-202ENST00000471372 EFCAB11Q9BUY7 163 aa2.98□□□□□ -1.93
SMC5-202ENST00000471372 BCL2L10Q9HD36 194 aa2.98□□□□□ -1.93
SMC5-202ENST00000471372 MYH7BA7E2Y1 1941 aa2.97□□□□□ -1.93
SMC5-202ENST00000471372 TLCD2A6NGC4 264 aa2.97□□□□□ -1.93
SMC5-202ENST00000471372 TSTD3H0UI37 97 aa2.97□□□□□ -1.93
SMC5-202ENST00000471372 IFNA14P01570 189 aa2.97□□□□□ -1.93
SMC5-202ENST00000471372 MBD3L1Q8WWY6 194 aa2.97□□□□□ -1.93
SMC5-202ENST00000471372 TEX37Q96LM6 180 aa2.97□□□□□ -1.93
SMC5-202ENST00000471372 SLC50A1Q9BRV3 221 aa2.97□□□□□ -1.93
SMC5-202ENST00000471372 TAS2R4Q9NYW5 299 aa2.97□□□□□ -1.93
SMC5-202ENST00000471372 NUMA1Q14980 2115 aa2.96□□□□□ -1.93
SMC5-202ENST00000471372 ARHGEF28Q8N1W1 1705 aaKnown RBP2.96□□□□□ -1.93
SMC5-202ENST00000471372 GLI3P10071 1580 aa2.96□□□□□ -1.94
SMC5-202ENST00000471372 SETD5Q9C0A6 1442 aa2.96□□□□□ -1.94
SMC5-202ENST00000471372 PFDN1O60925 122 aa2.96□□□□□ -1.94
SMC5-202ENST00000471372 MGST1P10620 155 aaKnown RBP2.96□□□□□ -1.94
SMC5-202ENST00000471372 SURF2Q15527 256 aaPredicted RBP2.96□□□□□ -1.94
SMC5-202ENST00000471372 MSMO1Q15800 293 aa2.96□□□□□ -1.94
SMC5-202ENST00000471372 SAMD13Q5VXD3 122 aa2.96□□□□□ -1.94
SMC5-202ENST00000471372 PPTC7Q8NI37 304 aa2.96□□□□□ -1.94
SMC5-202ENST00000471372 ZCCHC13Q8WW36 166 aaKnown RBP2.96□□□□□ -1.94
SMC5-202ENST00000471372 PYDC1Q8WXC3 89 aa2.96□□□□□ -1.94
SMC5-202ENST00000471372 CCDC32Q9BV29 185 aa2.96□□□□□ -1.94
SMC5-202ENST00000471372 RTL8AQ9BWD3 113 aa2.96□□□□□ -1.94
SMC5-202ENST00000471372 NPCDR1Q9BY65 106 aa2.96□□□□□ -1.94
SMC5-202ENST00000471372 C19orf12Q9NSK7 152 aa2.96□□□□□ -1.94
SMC5-202ENST00000471372 NHP2Q9NX24 153 aaKnown RBP2.96□□□□□ -1.94
SMC5-202ENST00000471372 DOCK4Q8N1I0 1966 aa2.96□□□□□ -1.94
SMC5-202ENST00000471372 LOC105371267A0A1B0GV96 52 aa2.95□□□□□ -1.94
SMC5-202ENST00000471372 PRORSD1PA6NEY8 169 aa2.95□□□□□ -1.94
SMC5-202ENST00000471372 E7EQ34 232 aa2.95□□□□□ -1.94
SMC5-202ENST00000471372 TMBIM6P55061 237 aa2.95□□□□□ -1.94
SMC5-202ENST00000471372 RTL8BQ17RB0 113 aa2.95□□□□□ -1.94
SMC5-202ENST00000471372 ESRGQ1W209 222 aa2.95□□□□□ -1.94
SMC5-202ENST00000471372 RNASE10Q5GAN6 216 aaKnown RBP2.95□□□□□ -1.94
SMC5-202ENST00000471372 C1orf140Q5VVS0 124 aa2.95□□□□□ -1.94
SMC5-202ENST00000471372 LINC00471Q8N535 108 aa2.95□□□□□ -1.94
SMC5-202ENST00000471372 ZC2HC1AQ96GY0 325 aa2.95□□□□□ -1.94
SMC5-202ENST00000471372 POPDC3Q9HBV1 291 aa2.95□□□□□ -1.94
SMC5-202ENST00000471372 TMEM106BQ9NUM4 274 aa2.95□□□□□ -1.94
SMC5-202ENST00000471372 COL5A1P20908 1838 aaPredicted RBP2.95□□□□□ -1.94
SMC5-202ENST00000471372 OBSL1O75147 1896 aa2.94□□□□□ -1.94
SMC5-202ENST00000471372 DISP1Q96F81 1524 aa2.94□□□□□ -1.94
SMC5-202ENST00000471372 ZFHX2Q9C0A1 2572 aaPredicted RBP2.94□□□□□ -1.94
SMC5-202ENST00000471372 TIMM17BO60830 172 aa2.94□□□□□ -1.94
SMC5-202ENST00000471372 GADD45GO95257 159 aa2.94□□□□□ -1.94
SMC5-202ENST00000471372 ASAH2BP0C7U1 165 aa2.94□□□□□ -1.94
SMC5-202ENST00000471372 GPX2P18283 190 aa2.94□□□□□ -1.94
SMC5-202ENST00000471372 ARPP19P56211 112 aa2.94□□□□□ -1.94
SMC5-202ENST00000471372 Q1T7F1 81 aa2.94□□□□□ -1.94
SMC5-202ENST00000471372 ST6GALNAC3Q8NDV1 305 aa2.94□□□□□ -1.94
SMC5-202ENST00000471372 ZNF418Q8TF45 676 aaPredicted RBP2.94□□□□□ -1.94
SMC5-202ENST00000471372 SLC25A21Q9BQT8 299 aaPredicted RBP2.94□□□□□ -1.94
SMC5-202ENST00000471372 LRTM1Q9HBL6 345 aa2.94□□□□□ -1.94
SMC5-202ENST00000471372 RNF11Q9Y3C5 154 aa2.94□□□□□ -1.94
SMC5-202ENST00000471372 NUBP2Q9Y5Y2 271 aa2.94□□□□□ -1.94
SMC5-202ENST00000471372 STRCQ7RTU9 1775 aa2.94□□□□□ -1.94
SMC5-202ENST00000471372 TECPR2O15040 1411 aa2.93□□□□□ -1.94
SMC5-202ENST00000471372 CD109Q6YHK3 1445 aa2.93□□□□□ -1.94
SMC5-202ENST00000471372 PLXNA3P51805 1871 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms