RNA–Protein interactions for RNA: ENST00000469713.1

VPS8-220, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 668 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-220ENST00000469713 DDA1Q9BW61 102 aa1.16□□□□□ -2.22
VPS8-220ENST00000469713 MIXL1Q9H2W2 232 aa1.16□□□□□ -2.22
VPS8-220ENST00000469713 BIN3Q9NQY0 253 aa1.16□□□□□ -2.22
VPS8-220ENST00000469713 CKLFQ9UBR5 152 aa1.16□□□□□ -2.22
VPS8-220ENST00000469713 PRNDQ9UKY0 176 aa1.16□□□□□ -2.22
VPS8-220ENST00000469713 PYCARDQ9ULZ3 195 aa1.16□□□□□ -2.22
VPS8-220ENST00000469713 FBN3Q75N90 2809 aa1.16□□□□□ -2.22
VPS8-220ENST00000469713 MICAL3Q7RTP6 2002 aa1.16□□□□□ -2.22
VPS8-220ENST00000469713 RP1P56715 2156 aa1.15□□□□□ -2.22
VPS8-220ENST00000469713 KIF1BO60333 1816 aa1.15□□□□□ -2.22
VPS8-220ENST00000469713 PLXND1Q9Y4D7 1925 aa1.15□□□□□ -2.22
VPS8-220ENST00000469713 TRAV14DV4A0A0A6YYC5 116 aa1.15□□□□□ -2.23
VPS8-220ENST00000469713 PIRO00625 290 aa1.15□□□□□ -2.23
VPS8-220ENST00000469713 CTSDP07339 412 aaPredicted RBP1.15□□□□□ -2.23
VPS8-220ENST00000469713 C8GP07360 202 aa1.15□□□□□ -2.23
VPS8-220ENST00000469713 FKBP2P26885 142 aaKnown RBP1.15□□□□□ -2.23
VPS8-220ENST00000469713 ERP29P30040 261 aaKnown RBP1.15□□□□□ -2.23
VPS8-220ENST00000469713 ATP5G3P48201 142 aa1.15□□□□□ -2.23
VPS8-220ENST00000469713 TCTAP57738 103 aa1.15□□□□□ -2.23
VPS8-220ENST00000469713 NCALDP61601 193 aa1.15□□□□□ -2.23
VPS8-220ENST00000469713 RHOBP62745 196 aa1.15□□□□□ -2.23
VPS8-220ENST00000469713 TFAMQ00059 246 aaKnown RBP1.15□□□□□ -2.23
VPS8-220ENST00000469713 TSNQ15631 228 aaKnown RBP1.15□□□□□ -2.23
VPS8-220ENST00000469713 AKR1C8PQ5T2L2 129 aa1.15□□□□□ -2.23
VPS8-220ENST00000469713 MIR17HGQ75NE6 70 aa1.15□□□□□ -2.23
VPS8-220ENST00000469713 GRINAQ7Z429 371 aa1.15□□□□□ -2.23
VPS8-220ENST00000469713 STX19Q8N4C7 294 aa1.15□□□□□ -2.23
VPS8-220ENST00000469713 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.15□□□□□ -2.23
VPS8-220ENST00000469713 ST6GALNAC3Q8NDV1 305 aa1.15□□□□□ -2.23
VPS8-220ENST00000469713 OR52R1Q8NGF1 315 aa1.15□□□□□ -2.23
VPS8-220ENST00000469713 OR13D1Q8NGV5 346 aa1.15□□□□□ -2.23
VPS8-220ENST00000469713 GRPEL2Q8TAA5 225 aa1.15□□□□□ -2.23
VPS8-220ENST00000469713 GNPDA2Q8TDQ7 276 aa1.15□□□□□ -2.23
VPS8-220ENST00000469713 ZHX1-C8orf76Q96EF9 292 aa1.15□□□□□ -2.23
VPS8-220ENST00000469713 RMND5BQ96G75 393 aaPredicted RBP1.15□□□□□ -2.23
VPS8-220ENST00000469713 SERPINI1Q99574 410 aa1.15□□□□□ -2.23
VPS8-220ENST00000469713 ARFGEF3Q5TH69 2177 aa1.15□□□□□ -2.23
VPS8-220ENST00000469713 FLG2Q5D862 2391 aaPredicted RBP1.15□□□□□ -2.23
VPS8-220ENST00000469713 MED12LQ86YW9 2145 aa1.15□□□□□ -2.23
VPS8-220ENST00000469713 STAB1Q9NY15 2570 aa1.14□□□□□ -2.23
VPS8-220ENST00000469713 TRAV4A0A0B4J268 109 aa1.14□□□□□ -2.23
VPS8-220ENST00000469713 G3V2T6 193 aa1.14□□□□□ -2.23
VPS8-220ENST00000469713 IFNA10P01566 189 aa1.14□□□□□ -2.23
VPS8-220ENST00000469713 CRHP06850 196 aa1.14□□□□□ -2.23
VPS8-220ENST00000469713 RNASE3P12724 160 aaKnown RBP1.14□□□□□ -2.23
VPS8-220ENST00000469713 SPI1P17947 270 aa1.14□□□□□ -2.23
VPS8-220ENST00000469713 PPIBP23284 216 aaKnown RBP1.14□□□□□ -2.23
VPS8-220ENST00000469713 SRIP30626 198 aa1.14□□□□□ -2.23
VPS8-220ENST00000469713 PHBP35232 272 aa1.14□□□□□ -2.23
VPS8-220ENST00000469713 CDC42P60953 191 aa1.14□□□□□ -2.23
VPS8-220ENST00000469713 RHEBQ15382 184 aa1.14□□□□□ -2.23
VPS8-220ENST00000469713 DCUN1D2Q6PH85 259 aa1.14□□□□□ -2.23
VPS8-220ENST00000469713 Q6Q795 121 aa1.14□□□□□ -2.23
VPS8-220ENST00000469713 DPPA3Q6W0C5 159 aa1.14□□□□□ -2.23
VPS8-220ENST00000469713 ZNF826PQ6ZT77 177 aa1.14□□□□□ -2.23
VPS8-220ENST00000469713 FAM24BQ8N5W8 94 aa1.14□□□□□ -2.23
VPS8-220ENST00000469713 OR5A1Q8NGJ0 315 aa1.14□□□□□ -2.23
VPS8-220ENST00000469713 C2orf50Q96LR7 162 aa1.14□□□□□ -2.23
VPS8-220ENST00000469713 CCDC90BQ9GZT6 254 aa1.14□□□□□ -2.23
VPS8-220ENST00000469713 RNF122Q9H9V4 155 aa1.14□□□□□ -2.23
VPS8-220ENST00000469713 SLC39A9Q9NUM3 307 aa1.14□□□□□ -2.23
VPS8-220ENST00000469713 SETD2Q9BYW2 2564 aaPredicted RBP1.14□□□□□ -2.23
VPS8-220ENST00000469713 TOPBP1Q92547 1522 aa1.14□□□□□ -2.23
VPS8-220ENST00000469713 FHAD1B1AJZ9 1412 aa1.14□□□□□ -2.23
VPS8-220ENST00000469713 MYH7BA7E2Y1 1941 aa1.13□□□□□ -2.23
VPS8-220ENST00000469713 A0A1W2PRE2 83 aa1.13□□□□□ -2.23
VPS8-220ENST00000469713 MAP1LC3B2A6NCE7 125 aa1.13□□□□□ -2.23
VPS8-220ENST00000469713 TSTD3H0UI37 97 aa1.13□□□□□ -2.23
VPS8-220ENST00000469713 ARPC5O15511 151 aa1.13□□□□□ -2.23
VPS8-220ENST00000469713 HCRTO43612 131 aa1.13□□□□□ -2.23
VPS8-220ENST00000469713 CSN2P05814 226 aa1.13□□□□□ -2.23
VPS8-220ENST00000469713 S100GP29377 79 aa1.13□□□□□ -2.23
VPS8-220ENST00000469713 LTC4SQ16873 150 aa1.13□□□□□ -2.23
VPS8-220ENST00000469713 LINC01554Q52M75 96 aa1.13□□□□□ -2.23
VPS8-220ENST00000469713 KHDC3LQ587J8 217 aa1.13□□□□□ -2.23
VPS8-220ENST00000469713 TMEM78Q5T7P6 136 aa1.13□□□□□ -2.23
VPS8-220ENST00000469713 LCA10Q71F78 164 aa1.13□□□□□ -2.23
VPS8-220ENST00000469713 DEFB128Q7Z7B8 93 aa1.13□□□□□ -2.23
VPS8-220ENST00000469713 LINC00471Q8N535 108 aa1.13□□□□□ -2.23
VPS8-220ENST00000469713 C12orf29Q8N999 325 aa1.13□□□□□ -2.23
VPS8-220ENST00000469713 DYDC1Q8WWB3 177 aa1.13□□□□□ -2.23
VPS8-220ENST00000469713 AQP3Q92482 292 aa1.13□□□□□ -2.23
VPS8-220ENST00000469713 GPR146Q96CH1 333 aa1.13□□□□□ -2.23
VPS8-220ENST00000469713 LYSMD1Q96S90 227 aa1.13□□□□□ -2.23
VPS8-220ENST00000469713 GPER1Q99527 375 aa1.13□□□□□ -2.23
VPS8-220ENST00000469713 SLC50A1Q9BRV3 221 aa1.13□□□□□ -2.23
VPS8-220ENST00000469713 MAP1LC3BQ9GZQ8 125 aa1.13□□□□□ -2.23
VPS8-220ENST00000469713 SH3BGRL3Q9H299 93 aa1.13□□□□□ -2.23
VPS8-220ENST00000469713 LYRM2Q9NU23 88 aaPredicted RBP1.13□□□□□ -2.23
VPS8-220ENST00000469713 ACER3Q9NUN7 267 aa1.13□□□□□ -2.23
VPS8-220ENST00000469713 TAS2R7Q9NYW3 318 aa1.13□□□□□ -2.23
VPS8-220ENST00000469713 TVP23BQ9NYZ1 205 aa1.13□□□□□ -2.23
VPS8-220ENST00000469713 OR5AC2Q9NZP5 309 aa1.13□□□□□ -2.23
VPS8-220ENST00000469713 SSR3Q9UNL2 185 aa1.13□□□□□ -2.23
VPS8-220ENST00000469713 ERGIC3Q9Y282 383 aa1.13□□□□□ -2.23
VPS8-220ENST00000469713 SETXQ7Z333 2677 aaKnown RBP1.13□□□□□ -2.23
VPS8-220ENST00000469713 DIDO1Q9BTC0 2240 aaKnown RBP1.13□□□□□ -2.23
VPS8-220ENST00000469713 ECM29Q5VYK3 1845 aa1.12□□□□□ -2.23
VPS8-220ENST00000469713 TRBV19A0A075B6N1 114 aa1.12□□□□□ -2.23
VPS8-220ENST00000469713 A0A0D9SG52 128 aa1.12□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms