RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 SLC35E1Q96K37 410 aa3.17□□□□□ -1.9
TMEM39A-204ENST00000468545 OR5B12Q96R08 314 aa3.17□□□□□ -1.9
TMEM39A-204ENST00000468545 ZNF471Q9BX82 626 aaPredicted RBP3.17□□□□□ -1.9
TMEM39A-204ENST00000468545 FBXL17Q9UF56 701 aa3.17□□□□□ -1.9
TMEM39A-204ENST00000468545 F11RQ9Y624 299 aaKnown RBP3.17□□□□□ -1.9
TMEM39A-204ENST00000468545 PLXNB1O43157 2135 aa3.16□□□□□ -1.9
TMEM39A-204ENST00000468545 BORCS7-ASMTA0A0B4J1R7 106 aa3.16□□□□□ -1.9
TMEM39A-204ENST00000468545 IGHV4-28A0A0C4DH34 117 aa3.16□□□□□ -1.9
TMEM39A-204ENST00000468545 UBE2L5PA0A1B0GUS4 154 aa3.16□□□□□ -1.9
TMEM39A-204ENST00000468545 PMS2P5A8MQ11 134 aa3.16□□□□□ -1.9
TMEM39A-204ENST00000468545 BCL2L11O43521 198 aa3.16□□□□□ -1.9
TMEM39A-204ENST00000468545 SOX15O60248 233 aa3.16□□□□□ -1.9
TMEM39A-204ENST00000468545 DFFBO76075 338 aa3.16□□□□□ -1.9
TMEM39A-204ENST00000468545 NDUFB4O95168 129 aa3.16□□□□□ -1.9
TMEM39A-204ENST00000468545 CLEC3BP05452 202 aa3.16□□□□□ -1.9
TMEM39A-204ENST00000468545 CRYGCP07315 174 aa3.16□□□□□ -1.9
TMEM39A-204ENST00000468545 HIST1H1BP16401 226 aaKnown RBP3.16□□□□□ -1.9
TMEM39A-204ENST00000468545 C4BPBP20851 252 aa3.16□□□□□ -1.9
TMEM39A-204ENST00000468545 FGF7P21781 194 aa3.16□□□□□ -1.9
TMEM39A-204ENST00000468545 GPX4P36969 197 aaPredicted RBP3.16□□□□□ -1.9
TMEM39A-204ENST00000468545 RAB9AP51151 201 aa3.16□□□□□ -1.9
TMEM39A-204ENST00000468545 ATP5IP56385 69 aaPredicted RBP3.16□□□□□ -1.9
TMEM39A-204ENST00000468545 HBG1P69891 147 aa3.16□□□□□ -1.9
TMEM39A-204ENST00000468545 HBG2P69892 147 aa3.16□□□□□ -1.9
TMEM39A-204ENST00000468545 RHOGP84095 191 aa3.16□□□□□ -1.9
TMEM39A-204ENST00000468545 AKR1C1Q04828 323 aa3.16□□□□□ -1.9
TMEM39A-204ENST00000468545 BAXQ07812 192 aa3.16□□□□□ -1.9
TMEM39A-204ENST00000468545 ATP6V1FQ16864 119 aa3.16□□□□□ -1.9
TMEM39A-204ENST00000468545 ETFRF1Q6IPR1 90 aa3.16□□□□□ -1.9
TMEM39A-204ENST00000468545 CLEC19AQ6UXS0 136 aa3.16□□□□□ -1.9
TMEM39A-204ENST00000468545 SLC16A13Q7RTY0 426 aa3.16□□□□□ -1.9
TMEM39A-204ENST00000468545 HSD17B11Q8NBQ5 300 aa3.16□□□□□ -1.9
TMEM39A-204ENST00000468545 OR5AU1Q8NGC0 362 aa3.16□□□□□ -1.9
TMEM39A-204ENST00000468545 OR1L6Q8NGR2 347 aa3.16□□□□□ -1.9
TMEM39A-204ENST00000468545 OR1P1Q8NH06 330 aa3.16□□□□□ -1.9
TMEM39A-204ENST00000468545 RNASEH2CQ8TDP1 164 aaKnown RBP3.16□□□□□ -1.9
TMEM39A-204ENST00000468545 TMEM68Q96MH6 324 aa3.16□□□□□ -1.9
TMEM39A-204ENST00000468545 AQP10Q96PS8 301 aa3.16□□□□□ -1.9
TMEM39A-204ENST00000468545 ATP5SQ99766 215 aa3.16□□□□□ -1.9
TMEM39A-204ENST00000468545 SRSF8Q9BRL6 282 aaKnown RBP3.16□□□□□ -1.9
TMEM39A-204ENST00000468545 TMEM147Q9BVK8 224 aa3.16□□□□□ -1.9
TMEM39A-204ENST00000468545 GON7Q9BXV9 100 aa3.16□□□□□ -1.9
TMEM39A-204ENST00000468545 FNDC4Q9H6D8 234 aaPredicted RBP3.16□□□□□ -1.9
TMEM39A-204ENST00000468545 GNB4Q9HAV0 340 aa3.16□□□□□ -1.9
TMEM39A-204ENST00000468545 CYTL1Q9NRR1 136 aa3.16□□□□□ -1.9
TMEM39A-204ENST00000468545 UQCC1Q9NVA1 299 aa3.16□□□□□ -1.9
TMEM39A-204ENST00000468545 THYN1Q9P016 225 aa3.16□□□□□ -1.9
TMEM39A-204ENST00000468545 MRPL36Q9P0J6 103 aaKnown RBP3.16□□□□□ -1.9
TMEM39A-204ENST00000468545 RFNGQ9Y644 331 aa3.16□□□□□ -1.9
TMEM39A-204ENST00000468545 ZFHX3Q15911 3703 aa3.16□□□□□ -1.9
TMEM39A-204ENST00000468545 ASH1LQ9NR48 2969 aaKnown RBP3.16□□□□□ -1.9
TMEM39A-204ENST00000468545 HIVEP2P31629 2446 aa3.15□□□□□ -1.9
TMEM39A-204ENST00000468545 IGLV11-55A0A075B6I3 123 aa3.15□□□□□ -1.91
TMEM39A-204ENST00000468545 IGHV3-35A0A0C4DH35 117 aa3.15□□□□□ -1.91
TMEM39A-204ENST00000468545 TCRBV4S1A1TA0A5B7 111 aa3.15□□□□□ -1.91
TMEM39A-204ENST00000468545 MFSD2BA6NFX1 497 aa3.15□□□□□ -1.91
TMEM39A-204ENST00000468545 OR2T8A6NH00 312 aa3.15□□□□□ -1.91
TMEM39A-204ENST00000468545 ZFP92A6NM28 416 aa3.15□□□□□ -1.91
TMEM39A-204ENST00000468545 USP17L23D6RBM5 183 aa3.15□□□□□ -1.91
TMEM39A-204ENST00000468545 INS-IGF2F8WCM5 200 aa3.15□□□□□ -1.91
TMEM39A-204ENST00000468545 CLDN34H7C241 214 aa3.15□□□□□ -1.91
TMEM39A-204ENST00000468545 I3L2K1 104 aa3.15□□□□□ -1.91
TMEM39A-204ENST00000468545 K7EIM0 57 aa3.15□□□□□ -1.91
TMEM39A-204ENST00000468545 CORTO00230 105 aa3.15□□□□□ -1.91
TMEM39A-204ENST00000468545 TAAR5O14804 337 aa3.15□□□□□ -1.91
TMEM39A-204ENST00000468545 GNG7O60262 68 aa3.15□□□□□ -1.91
TMEM39A-204ENST00000468545 TSPAN9O75954 239 aa3.15□□□□□ -1.91
TMEM39A-204ENST00000468545 YIF1AO95070 293 aa3.15□□□□□ -1.91
TMEM39A-204ENST00000468545 IGF1P05019 195 aa3.15□□□□□ -1.91
TMEM39A-204ENST00000468545 CD28P10747 220 aa3.15□□□□□ -1.91
TMEM39A-204ENST00000468545 MDKP21741 143 aaPredicted RBP3.15□□□□□ -1.91
TMEM39A-204ENST00000468545 GATA2P23769 480 aaPredicted RBP3.15□□□□□ -1.91
TMEM39A-204ENST00000468545 OR10J1P30954 320 aa3.15□□□□□ -1.91
TMEM39A-204ENST00000468545 NPBWR1P48145 328 aa3.15□□□□□ -1.91
TMEM39A-204ENST00000468545 AMTP48728 403 aa3.15□□□□□ -1.91
TMEM39A-204ENST00000468545 CAMLGP49069 296 aa3.15□□□□□ -1.91
TMEM39A-204ENST00000468545 RND2P52198 227 aa3.15□□□□□ -1.91
TMEM39A-204ENST00000468545 MFAP4P55083 255 aa3.15□□□□□ -1.91
TMEM39A-204ENST00000468545 DLK1P80370 383 aa3.15□□□□□ -1.91
TMEM39A-204ENST00000468545 RUNX1Q01196 453 aa3.15□□□□□ -1.91
TMEM39A-204ENST00000468545 RAB31Q13636 194 aa3.15□□□□□ -1.91
TMEM39A-204ENST00000468545 EXOSC2Q13868 293 aaKnown RBP3.15□□□□□ -1.91
TMEM39A-204ENST00000468545 GAMTQ14353 236 aa3.15□□□□□ -1.91
TMEM39A-204ENST00000468545 C15orf32Q32M92 178 aa3.15□□□□□ -1.91
TMEM39A-204ENST00000468545 BSXQ3C1V8 233 aa3.15□□□□□ -1.91
TMEM39A-204ENST00000468545 TIGITQ495A1 244 aa3.15□□□□□ -1.91
TMEM39A-204ENST00000468545 TEX38Q6PEX7 206 aa3.15□□□□□ -1.91
TMEM39A-204ENST00000468545 BTNL8Q6UX41 500 aa3.15□□□□□ -1.91
TMEM39A-204ENST00000468545 SLC51BQ86UW2 128 aa3.15□□□□□ -1.91
TMEM39A-204ENST00000468545 KLHDC1Q8N7A1 406 aa3.15□□□□□ -1.91
TMEM39A-204ENST00000468545 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.15□□□□□ -1.91
TMEM39A-204ENST00000468545 ZNF709Q8N972 641 aa3.15□□□□□ -1.91
TMEM39A-204ENST00000468545 ZNF114Q8NC26 417 aa3.15□□□□□ -1.91
TMEM39A-204ENST00000468545 OR4X2Q8NGF9 303 aa3.15□□□□□ -1.91
TMEM39A-204ENST00000468545 OR2G3Q8NGZ4 309 aa3.15□□□□□ -1.91
TMEM39A-204ENST00000468545 OR4F5Q8NH21 305 aa3.15□□□□□ -1.91
TMEM39A-204ENST00000468545 LINC01006Q8NI28 216 aa3.15□□□□□ -1.91
TMEM39A-204ENST00000468545 EEF1AKMT3Q96AZ1 226 aa3.15□□□□□ -1.91
TMEM39A-204ENST00000468545 RSG1Q9BU20 258 aa3.15□□□□□ -1.91
TMEM39A-204ENST00000468545 NPVFQ9HCQ7 196 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms