RNA–Protein interactions for RNA: ENST00000468253.1

NPHP4-206, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-206ENST00000468253 DLK1P80370 383 aa14.99□□□□□ -0.01
NPHP4-206ENST00000468253 LILRB2Q8N423 598 aa14.99□□□□□ -0.01
NPHP4-206ENST00000468253 ST8SIA2Q92186 375 aa14.99□□□□□ -0.01
NPHP4-206ENST00000468253 NMES1Q9C002 83 aa14.99□□□□□ -0.01
NPHP4-206ENST00000468253 TUBA4BQ9H853 241 aa14.99□□□□□ -0.01
NPHP4-206ENST00000468253 IGKV1OR2-108A0A075B7D4 117 aa14.98□□□□□ -0.01
NPHP4-206ENST00000468253 IGHV3-49A0A0A0MS15 119 aa14.98□□□□□ -0.01
NPHP4-206ENST00000468253 OR11H12B2RN74 326 aa14.98□□□□□ -0.01
NPHP4-206ENST00000468253 IL4P05112 153 aa14.98□□□□□ -0.01
NPHP4-206ENST00000468253 HNRNPCP07910 306 aaKnown RBP eCLIP14.98□□□□□ -0.01
NPHP4-206ENST00000468253 FRMD6-AS1P0C7T7 363 aa14.98□□□□□ -0.01
NPHP4-206ENST00000468253 METTL15P1P0C7V9 234 aa14.98□□□□□ -0.01
NPHP4-206ENST00000468253 ZNF90Q03938 601 aa14.98□□□□□ -0.01
NPHP4-206ENST00000468253 OR8G2PQ6IF36 304 aa14.98□□□□□ -0.01
NPHP4-206ENST00000468253 GRAMD2BQ96HH9 432 aa14.98□□□□□ -0.01
NPHP4-206ENST00000468253 NPVFQ9HCQ7 196 aa14.98□□□□□ -0.01
NPHP4-206ENST00000468253 LSM5Q9Y4Y9 91 aaKnown RBP14.98□□□□□ -0.01
NPHP4-206ENST00000468253 SELENOKQ9Y6D0 94 aa14.98□□□□□ -0.01
NPHP4-206ENST00000468253 TRAV2A0A0B4J234 112 aa14.97□□□□□ -0.01
NPHP4-206ENST00000468253 RAB32Q13637 225 aa14.97□□□□□ -0.01
NPHP4-206ENST00000468253 ACOT7LQ6ZUV0 252 aa14.97□□□□□ -0.01
NPHP4-206ENST00000468253 TCF24Q7RTU0 167 aa14.97□□□□□ -0.01
NPHP4-206ENST00000468253 RABAC1Q9UI14 185 aa14.97□□□□□ -0.01
NPHP4-206ENST00000468253 IGHV3OR16-13A0A075B7E8 117 aa14.96□□□□□ -0.01
NPHP4-206ENST00000468253 IGHV3-74A0A0B4J1X5 117 aa14.96□□□□□ -0.01
NPHP4-206ENST00000468253 GOSR2O14653 212 aa14.96□□□□□ -0.01
NPHP4-206ENST00000468253 SSNA1O43805 119 aa14.96□□□□□ -0.01
NPHP4-206ENST00000468253 DFFBO76075 338 aa14.96□□□□□ -0.01
NPHP4-206ENST00000468253 RLN2P04090 185 aa14.96□□□□□ -0.01
NPHP4-206ENST00000468253 NUP62P37198 522 aaPredicted RBP14.96□□□□□ -0.01
NPHP4-206ENST00000468253 AP2S1P53680 142 aaPredicted RBP14.96□□□□□ -0.01
NPHP4-206ENST00000468253 USF2Q15853 346 aaPredicted RBP14.96□□□□□ -0.01
NPHP4-206ENST00000468253 LINC00322Q6ZN03 302 aaPredicted RBP14.96□□□□□ -0.01
NPHP4-206ENST00000468253 RNF125Q96EQ8 232 aa14.96□□□□□ -0.01
NPHP4-206ENST00000468253 SIX6O95475 246 aa14.95□□□□□ -0.02
NPHP4-206ENST00000468253 P2RY1P47900 373 aa14.95□□□□□ -0.02
NPHP4-206ENST00000468253 AKR1C1Q04828 323 aa14.95□□□□□ -0.02
NPHP4-206ENST00000468253 C16orf54Q6UWD8 224 aa14.95□□□□□ -0.02
NPHP4-206ENST00000468253 SBSPONQ8IVN8 264 aa14.95□□□□□ -0.02
NPHP4-206ENST00000468253 LYRM2Q9NU23 88 aaPredicted RBP14.95□□□□□ -0.02
NPHP4-206ENST00000468253 MGAT4CQ9UBM8 478 aa14.95□□□□□ -0.02
NPHP4-206ENST00000468253 HELTA6NFD8 242 aa14.94□□□□□ -0.02
NPHP4-206ENST00000468253 BUB3O43684 328 aa14.94□□□□□ -0.02
NPHP4-206ENST00000468253 EIF2B2P49770 351 aaKnown RBP14.94□□□□□ -0.02
NPHP4-206ENST00000468253 BCAP31P51572 246 aa14.94□□□□□ -0.02
NPHP4-206ENST00000468253 SELENOTP62341 195 aa14.94□□□□□ -0.02
NPHP4-206ENST00000468253 ARL16Q0P5N6 197 aa14.94□□□□□ -0.02
NPHP4-206ENST00000468253 DEFB125Q8N687 156 aa14.94□□□□□ -0.02
NPHP4-206ENST00000468253 SLC45A2Q9UMX9 530 aa14.94□□□□□ -0.02
NPHP4-206ENST00000468253 IGHV3-66A0A0C4DH42 116 aa14.93□□□□□ -0.02
NPHP4-206ENST00000468253 CCNKO75909 580 aa14.93□□□□□ -0.02
NPHP4-206ENST00000468253 CAV2P51636 162 aa14.93□□□□□ -0.02
NPHP4-206ENST00000468253 H2BFSP57053 126 aa14.93□□□□□ -0.02
NPHP4-206ENST00000468253 S100A10P60903 97 aa14.93□□□□□ -0.02
NPHP4-206ENST00000468253 C1orf194Q5T5A4 169 aa14.93□□□□□ -0.02
NPHP4-206ENST00000468253 BPIFCQ8NFQ6 507 aa14.93□□□□□ -0.02
NPHP4-206ENST00000468253 MS4A6AQ9H2W1 248 aa14.93□□□□□ -0.02
NPHP4-206ENST00000468253 FAM24AA6NFZ4 105 aa14.92□□□□□ -0.02
NPHP4-206ENST00000468253 S100A7P31151 101 aa14.92□□□□□ -0.02
NPHP4-206ENST00000468253 S100A11P31949 105 aa14.92□□□□□ -0.02
NPHP4-206ENST00000468253 SULT1A1P50225 295 aa14.92□□□□□ -0.02
NPHP4-206ENST00000468253 RPL11P62913 178 aaKnown RBP14.92□□□□□ -0.02
NPHP4-206ENST00000468253 OR2F1Q13607 317 aa14.92□□□□□ -0.02
NPHP4-206ENST00000468253 TEPPQ6URK8 271 aa14.92□□□□□ -0.02
NPHP4-206ENST00000468253 TMEM252Q8N6L7 170 aa14.92□□□□□ -0.02
NPHP4-206ENST00000468253 GLMPQ8WWB7 406 aa14.92□□□□□ -0.02
NPHP4-206ENST00000468253 ASCL2Q99929 193 aa14.92□□□□□ -0.02
NPHP4-206ENST00000468253 COL7A1Q02388 2944 aa14.91□□□□□ -0.02
NPHP4-206ENST00000468253 SMCO3A2RU48 225 aa14.91□□□□□ -0.02
NPHP4-206ENST00000468253 E5RGE8 158 aa14.91□□□□□ -0.02
NPHP4-206ENST00000468253 DNASE2O00115 360 aaPredicted RBP14.91□□□□□ -0.02
NPHP4-206ENST00000468253 RRAS2P62070 204 aaPredicted RBP14.91□□□□□ -0.02
NPHP4-206ENST00000468253 ATP6V1FQ16864 119 aa14.91□□□□□ -0.02
NPHP4-206ENST00000468253 CYP2G1PQ6ZSU1 146 aa14.91□□□□□ -0.02
NPHP4-206ENST00000468253 PBDC1Q9BVG4 233 aa14.91□□□□□ -0.02
NPHP4-206ENST00000468253 SRD5A3Q9H8P0 318 aa14.91□□□□□ -0.02
NPHP4-206ENST00000468253 ALG5Q9Y673 324 aa14.91□□□□□ -0.02
NPHP4-206ENST00000468253 RBMY1BA6NDE4 496 aaKnown RBP14.9□□□□□ -0.02
NPHP4-206ENST00000468253 RBMY1EA6NEQ0 496 aaKnown RBP14.9□□□□□ -0.02
NPHP4-206ENST00000468253 RBMY1DP0C7P1 496 aaKnown RBP14.9□□□□□ -0.02
NPHP4-206ENST00000468253 PLP1P60201 277 aa14.9□□□□□ -0.02
NPHP4-206ENST00000468253 LYZP61626 148 aa14.9□□□□□ -0.02
NPHP4-206ENST00000468253 HBG1P69891 147 aa14.9□□□□□ -0.02
NPHP4-206ENST00000468253 HBG2P69892 147 aa14.9□□□□□ -0.02
NPHP4-206ENST00000468253 SLC38A11Q08AI6 406 aa14.9□□□□□ -0.02
NPHP4-206ENST00000468253 HAGHQ16775 308 aa14.9□□□□□ -0.02
NPHP4-206ENST00000468253 RGS21Q2M5E4 152 aa14.9□□□□□ -0.02
NPHP4-206ENST00000468253 ODF3L2Q3SX64 289 aa14.9□□□□□ -0.02
NPHP4-206ENST00000468253 STX12Q86Y82 276 aa14.9□□□□□ -0.02
NPHP4-206ENST00000468253 GBGT1Q8N5D6 347 aa14.9□□□□□ -0.02
NPHP4-206ENST00000468253 SLC25A31Q9H0C2 315 aa14.9□□□□□ -0.02
NPHP4-206ENST00000468253 SEPSECSQ9HD40 501 aaKnown RBP14.9□□□□□ -0.02
NPHP4-206ENST00000468253 CST7O76096 145 aa14.89□□□□□ -0.03
NPHP4-206ENST00000468253 VWC2Q2TAL6 325 aa14.89□□□□□ -0.03
NPHP4-206ENST00000468253 TMEM182Q6ZP80 229 aaPredicted RBP14.89□□□□□ -0.03
NPHP4-206ENST00000468253 PPP1R1CQ8WVI7 109 aa14.89□□□□□ -0.03
NPHP4-206ENST00000468253 TM2D3Q9BRN9 247 aa14.89□□□□□ -0.03
NPHP4-206ENST00000468253 FBXL17Q9UF56 701 aa14.89□□□□□ -0.03
NPHP4-206ENST00000468253 IGKV3-7A0A075B6H7 116 aa14.88□□□□□ -0.03
NPHP4-206ENST00000468253 H0YIZ8 118 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 154 ms