RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 KIR2DL5BQ8NHK3 375 aa8.51□□□□□ -1.05
CDHR3-205ENST00000468143 CIB3Q96Q77 187 aaPredicted RBP8.51□□□□□ -1.05
CDHR3-205ENST00000468143 KMT2CQ8NEZ4 4911 aaKnown RBP8.5□□□□□ -1.05
CDHR3-205ENST00000468143 TRAV6A0A075B6T7 132 aa8.5□□□□□ -1.05
CDHR3-205ENST00000468143 SCGB1D2O95969 90 aa8.5□□□□□ -1.05
CDHR3-205ENST00000468143 TCRBP04435 133 aa8.5□□□□□ -1.05
CDHR3-205ENST00000468143 ZNF688P0C7X2 276 aa8.5□□□□□ -1.05
CDHR3-205ENST00000468143 NKX2-1P43699 371 aaPredicted RBP8.5□□□□□ -1.05
CDHR3-205ENST00000468143 RPP30P78346 268 aaKnown RBP8.5□□□□□ -1.05
CDHR3-205ENST00000468143 Q6ZWC4 215 aa8.5□□□□□ -1.05
CDHR3-205ENST00000468143 OR4D5Q8NGN0 318 aa8.5□□□□□ -1.05
CDHR3-205ENST00000468143 GLMPQ8WWB7 406 aa8.5□□□□□ -1.05
CDHR3-205ENST00000468143 RNF183Q96D59 192 aa8.5□□□□□ -1.05
CDHR3-205ENST00000468143 RNF125Q96EQ8 232 aa8.5□□□□□ -1.05
CDHR3-205ENST00000468143 CSTL1Q9H114 145 aa8.5□□□□□ -1.05
CDHR3-205ENST00000468143 C20orf85Q9H1P6 137 aa8.5□□□□□ -1.05
CDHR3-205ENST00000468143 PSENENQ9NZ42 101 aa8.5□□□□□ -1.05
CDHR3-205ENST00000468143 GSKIPQ9P0R6 139 aa8.5□□□□□ -1.05
CDHR3-205ENST00000468143 TENM3Q9P273 2699 aa8.5□□□□□ -1.05
CDHR3-205ENST00000468143 IGKV1OR2-108A0A075B7D4 117 aa8.49□□□□□ -1.05
CDHR3-205ENST00000468143 TRAV2A0A0B4J234 112 aa8.49□□□□□ -1.05
CDHR3-205ENST00000468143 A0A0J9YWU9 116 aa8.49□□□□□ -1.05
CDHR3-205ENST00000468143 HELTA6NFD8 242 aa8.49□□□□□ -1.05
CDHR3-205ENST00000468143 A6NHS1 94 aa8.49□□□□□ -1.05
CDHR3-205ENST00000468143 KNCNA6PVL3 124 aa8.49□□□□□ -1.05
CDHR3-205ENST00000468143 PRSS46E5RG02 174 aa8.49□□□□□ -1.05
CDHR3-205ENST00000468143 BUB3O43684 328 aa8.49□□□□□ -1.05
CDHR3-205ENST00000468143 SSSCA1O60232 199 aa8.49□□□□□ -1.05
CDHR3-205ENST00000468143 LYZP61626 148 aa8.49□□□□□ -1.05
CDHR3-205ENST00000468143 EWSR1Q01844 656 aaKnown RBP eCLIP8.49□□□□□ -1.05
CDHR3-205ENST00000468143 IAH1Q2TAA2 248 aaPredicted RBP8.49□□□□□ -1.05
CDHR3-205ENST00000468143 DCANP1Q8TF63 244 aa8.49□□□□□ -1.05
CDHR3-205ENST00000468143 MITD1Q8WV92 249 aa8.49□□□□□ -1.05
CDHR3-205ENST00000468143 SEC22CQ9BRL7 303 aa8.49□□□□□ -1.05
CDHR3-205ENST00000468143 STRAPQ9Y3F4 350 aaKnown RBP8.49□□□□□ -1.05
CDHR3-205ENST00000468143 STAB2Q8WWQ8 2551 aa8.48□□□□□ -1.05
CDHR3-205ENST00000468143 SNRPGP15A8MWD9 76 aa8.48□□□□□ -1.05
CDHR3-205ENST00000468143 CCSO14618 274 aa8.48□□□□□ -1.05
CDHR3-205ENST00000468143 CCNKO75909 580 aa8.48□□□□□ -1.05
CDHR3-205ENST00000468143 GATA2P23769 480 aaPredicted RBP8.48□□□□□ -1.05
CDHR3-205ENST00000468143 EIF2B2P49770 351 aaKnown RBP8.48□□□□□ -1.05
CDHR3-205ENST00000468143 AP2S1P53680 142 aaPredicted RBP8.48□□□□□ -1.05
CDHR3-205ENST00000468143 PSMG4Q5JS54 123 aa8.48□□□□□ -1.05
CDHR3-205ENST00000468143 OR8G2PQ6IF36 304 aa8.48□□□□□ -1.05
CDHR3-205ENST00000468143 SIGLEC15Q6ZMC9 328 aa8.48□□□□□ -1.05
CDHR3-205ENST00000468143 TMEM182Q6ZP80 229 aaPredicted RBP8.48□□□□□ -1.05
CDHR3-205ENST00000468143 STHQ8IWL8 128 aa8.48□□□□□ -1.05
CDHR3-205ENST00000468143 ZBTB8BQ8NAP8 495 aaPredicted RBP8.48□□□□□ -1.05
CDHR3-205ENST00000468143 TRGV9Q99603 122 aa8.48□□□□□ -1.05
CDHR3-205ENST00000468143 CCDC32Q9BV29 185 aa8.48□□□□□ -1.05
CDHR3-205ENST00000468143 TP53TG1Q9Y2A0 90 aa8.48□□□□□ -1.05
CDHR3-205ENST00000468143 SMCO3A2RU48 225 aa8.47□□□□□ -1.05
CDHR3-205ENST00000468143 FAM25EA8MYX2 175 aa8.47□□□□□ -1.05
CDHR3-205ENST00000468143 CA1P00915 261 aaPredicted RBP8.47□□□□□ -1.05
CDHR3-205ENST00000468143 FABP1P07148 127 aa8.47□□□□□ -1.05
CDHR3-205ENST00000468143 PAX9P55771 341 aa8.47□□□□□ -1.05
CDHR3-205ENST00000468143 RRAS2P62070 204 aaPredicted RBP8.47□□□□□ -1.05
CDHR3-205ENST00000468143 AKR1C1Q04828 323 aa8.47□□□□□ -1.05
CDHR3-205ENST00000468143 ACTL10Q5JWF8 245 aa8.47□□□□□ -1.05
CDHR3-205ENST00000468143 ACOT7LQ6ZUV0 252 aa8.47□□□□□ -1.05
CDHR3-205ENST00000468143 THAP8Q8NA92 274 aa8.47□□□□□ -1.05
CDHR3-205ENST00000468143 IL17DQ8TAD2 202 aa8.47□□□□□ -1.05
CDHR3-205ENST00000468143 PPP1R14BQ96C90 147 aa8.47□□□□□ -1.05
CDHR3-205ENST00000468143 SMIM8Q96KF7 97 aa8.47□□□□□ -1.05
CDHR3-205ENST00000468143 NUDT15Q9NV35 164 aa8.47□□□□□ -1.05
CDHR3-205ENST00000468143 RYR3Q15413 4870 aa8.47□□□□□ -1.05
CDHR3-205ENST00000468143 PMS2P5A8MQ11 134 aa8.46□□□□□ -1.06
CDHR3-205ENST00000468143 H2AFB2P0C5Z0 115 aa8.46□□□□□ -1.06
CDHR3-205ENST00000468143 METTL15P1P0C7V9 234 aa8.46□□□□□ -1.06
CDHR3-205ENST00000468143 PMS2P11Q13670 270 aa8.46□□□□□ -1.06
CDHR3-205ENST00000468143 ZNF431Q8TF32 576 aaPredicted RBP8.46□□□□□ -1.06
CDHR3-205ENST00000468143 S100ZQ8WXG8 99 aa8.46□□□□□ -1.06
CDHR3-205ENST00000468143 RAB40CQ96S21 281 aa8.46□□□□□ -1.06
CDHR3-205ENST00000468143 RARRES2Q99969 163 aa8.46□□□□□ -1.06
CDHR3-205ENST00000468143 NRN1Q9NPD7 142 aa8.46□□□□□ -1.06
CDHR3-205ENST00000468143 TBC1D24Q9ULP9 559 aa8.46□□□□□ -1.06
CDHR3-205ENST00000468143 FAM240BA0A1B0GVZ2 78 aa8.45□□□□□ -1.06
CDHR3-205ENST00000468143 C5orf51A6NDU8 294 aa8.45□□□□□ -1.06
CDHR3-205ENST00000468143 MBPP02686 304 aaPredicted RBP8.45□□□□□ -1.06
CDHR3-205ENST00000468143 ORM2P19652 201 aa8.45□□□□□ -1.06
CDHR3-205ENST00000468143 TRPT1Q86TN4 253 aaKnown RBP8.45□□□□□ -1.06
CDHR3-205ENST00000468143 C12orf45Q8N5I9 185 aaPredicted RBP8.45□□□□□ -1.06
CDHR3-205ENST00000468143 OR11H2Q8NH07 326 aa8.45□□□□□ -1.06
CDHR3-205ENST00000468143 PFDN2Q9UHV9 154 aa8.45□□□□□ -1.06
CDHR3-205ENST00000468143 RCL1Q9Y2P8 373 aaKnown RBP8.45□□□□□ -1.06
CDHR3-205ENST00000468143 DEFB4AO15263 64 aa8.44□□□□□ -1.06
CDHR3-205ENST00000468143 GIG44P09565 113 aaPredicted RBP8.44□□□□□ -1.06
CDHR3-205ENST00000468143 DEFB1P60022 68 aa8.44□□□□□ -1.06
CDHR3-205ENST00000468143 SNRPD3P62318 126 aaKnown RBP8.44□□□□□ -1.06
CDHR3-205ENST00000468143 ZNF846Q147U1 533 aa8.44□□□□□ -1.06
CDHR3-205ENST00000468143 MZT2BQ6NZ67 158 aa8.44□□□□□ -1.06
CDHR3-205ENST00000468143 TMEM14EPQ6UXP3 125 aa8.44□□□□□ -1.06
CDHR3-205ENST00000468143 LINC00299Q6ZSB3 139 aa8.44□□□□□ -1.06
CDHR3-205ENST00000468143 TMEM144Q7Z5S9 345 aa8.44□□□□□ -1.06
CDHR3-205ENST00000468143 OR8I2Q8N0Y5 310 aa8.44□□□□□ -1.06
CDHR3-205ENST00000468143 BPIFCQ8NFQ6 507 aa8.44□□□□□ -1.06
CDHR3-205ENST00000468143 OR1B1Q8NGR6 318 aa8.44□□□□□ -1.06
CDHR3-205ENST00000468143 LINC00052Q96N35 136 aa8.44□□□□□ -1.06
CDHR3-205ENST00000468143 WDR12Q9GZL7 423 aaKnown RBP8.44□□□□□ -1.06
CDHR3-205ENST00000468143 SLC25A22Q9H936 323 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms