RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 QTRT1Q9BXR0 403 aaKnown RBP5.43□□□□□ -1.54
SCAF4-204ENST00000467731 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.43□□□□□ -1.54
SCAF4-204ENST00000467731 ST8SIA3O43173 380 aa5.43□□□□□ -1.54
SCAF4-204ENST00000467731 FBXO24O75426 580 aa5.43□□□□□ -1.54
SCAF4-204ENST00000467731 ACTL6BO94805 426 aa5.43□□□□□ -1.54
SCAF4-204ENST00000467731 HLA-DRB1P01911 266 aa5.43□□□□□ -1.54
SCAF4-204ENST00000467731 NDPQ00604 133 aa5.43□□□□□ -1.54
SCAF4-204ENST00000467731 SPINK9Q5DT21 86 aa5.43□□□□□ -1.54
SCAF4-204ENST00000467731 CXorf66Q5JRM2 361 aaPredicted RBP5.43□□□□□ -1.54
SCAF4-204ENST00000467731 COMMD5Q9GZQ3 224 aa5.43□□□□□ -1.54
SCAF4-204ENST00000467731 PEF1Q9UBV8 284 aaKnown RBP5.43□□□□□ -1.54
SCAF4-204ENST00000467731 VAX2Q9UIW0 290 aa5.43□□□□□ -1.54
SCAF4-204ENST00000467731 PRNDQ9UKY0 176 aa5.43□□□□□ -1.54
SCAF4-204ENST00000467731 FOXA2Q9Y261 457 aaPredicted RBP5.43□□□□□ -1.54
SCAF4-204ENST00000467731 OR51B2Q9Y5P1 312 aa5.43□□□□□ -1.54
SCAF4-204ENST00000467731 COX11Q9Y6N1 276 aa5.43□□□□□ -1.54
SCAF4-204ENST00000467731 ATRQ13535 2644 aa5.43□□□□□ -1.54
SCAF4-204ENST00000467731 IGHV7-81A0A0B4J1V7 117 aa5.43□□□□□ -1.54
SCAF4-204ENST00000467731 GPR137BO60478 399 aa5.43□□□□□ -1.54
SCAF4-204ENST00000467731 OR10J4P0C629 311 aa5.43□□□□□ -1.54
SCAF4-204ENST00000467731 CX3CL1P78423 397 aa5.43□□□□□ -1.54
SCAF4-204ENST00000467731 LRRC37A5PQ49AS3 106 aa5.43□□□□□ -1.54
SCAF4-204ENST00000467731 Q6ZS46 218 aa5.43□□□□□ -1.54
SCAF4-204ENST00000467731 NMES1Q9C002 83 aa5.43□□□□□ -1.54
SCAF4-204ENST00000467731 TEX50A0A1B0GTY4 177 aa5.42□□□□□ -1.54
SCAF4-204ENST00000467731 A0A1B0GW64 132 aa5.42□□□□□ -1.54
SCAF4-204ENST00000467731 RNF222A6NCQ9 220 aa5.42□□□□□ -1.54
SCAF4-204ENST00000467731 FAM181BA6NEQ2 426 aa5.42□□□□□ -1.54
SCAF4-204ENST00000467731 CLDN34H7C241 214 aa5.42□□□□□ -1.54
SCAF4-204ENST00000467731 CNIH1O95406 144 aa5.42□□□□□ -1.54
SCAF4-204ENST00000467731 TSPAN15O95858 294 aa5.42□□□□□ -1.54
SCAF4-204ENST00000467731 TRGC2P03986 189 aa5.42□□□□□ -1.54
SCAF4-204ENST00000467731 OR5G3P0C626 314 aa5.42□□□□□ -1.54
SCAF4-204ENST00000467731 APELAP0DMC3 54 aa5.42□□□□□ -1.54
SCAF4-204ENST00000467731 OR10J1P30954 320 aa5.42□□□□□ -1.54
SCAF4-204ENST00000467731 NKX2-1P43699 371 aaPredicted RBP5.42□□□□□ -1.54
SCAF4-204ENST00000467731 IL15RAQ13261 267 aa5.42□□□□□ -1.54
SCAF4-204ENST00000467731 ZNF562Q6V9R5 426 aa5.42□□□□□ -1.54
SCAF4-204ENST00000467731 MTURNQ8N3F0 131 aa5.42□□□□□ -1.54
SCAF4-204ENST00000467731 OR5B3Q8NH48 314 aa5.42□□□□□ -1.54
SCAF4-204ENST00000467731 PPP1R1CQ8WVI7 109 aa5.42□□□□□ -1.54
SCAF4-204ENST00000467731 SRSF12Q8WXF0 261 aaKnown RBP5.42□□□□□ -1.54
SCAF4-204ENST00000467731 FAM103A1Q9BTL3 118 aaKnown RBP5.42□□□□□ -1.54
SCAF4-204ENST00000467731 FKBP11Q9NYL4 201 aa5.42□□□□□ -1.54
SCAF4-204ENST00000467731 ZNF257Q9Y2Q1 563 aa5.42□□□□□ -1.54
SCAF4-204ENST00000467731 CGB1A6NKQ9 187 aa5.42□□□□□ -1.54
SCAF4-204ENST00000467731 LINC01548A6NM66 108 aa5.42□□□□□ -1.54
SCAF4-204ENST00000467731 RNASE1P07998 156 aaKnown RBP5.42□□□□□ -1.54
SCAF4-204ENST00000467731 HSPE1P61604 102 aaKnown RBP5.42□□□□□ -1.54
SCAF4-204ENST00000467731 CYCSP99999 105 aaKnown RBP5.42□□□□□ -1.54
SCAF4-204ENST00000467731 ID3Q02535 119 aa5.42□□□□□ -1.54
SCAF4-204ENST00000467731 RAB32Q13637 225 aa5.42□□□□□ -1.54
SCAF4-204ENST00000467731 FXYD3Q14802 87 aa5.42□□□□□ -1.54
SCAF4-204ENST00000467731 OR1L8Q8NGR8 309 aa5.42□□□□□ -1.54
SCAF4-204ENST00000467731 ABHD5Q8WTS1 349 aa5.42□□□□□ -1.54
SCAF4-204ENST00000467731 TAF15Q92804 592 aaKnown RBP eCLIP5.42□□□□□ -1.54
SCAF4-204ENST00000467731 TNFSF18Q9UNG2 199 aa5.42□□□□□ -1.54
SCAF4-204ENST00000467731 PPP5D1E7EU14 171 aa5.41□□□□□ -1.54
SCAF4-204ENST00000467731 GNG7O60262 68 aa5.41□□□□□ -1.54
SCAF4-204ENST00000467731 SLC25A4P12235 298 aa5.41□□□□□ -1.54
SCAF4-204ENST00000467731 TPT1P13693 172 aaKnown RBP5.41□□□□□ -1.54
SCAF4-204ENST00000467731 ARL3P36405 182 aa5.41□□□□□ -1.54
SCAF4-204ENST00000467731 RPL27AP46776 148 aaKnown RBP5.41□□□□□ -1.54
SCAF4-204ENST00000467731 S100A10P60903 97 aa5.41□□□□□ -1.54
SCAF4-204ENST00000467731 SRSF2Q01130 221 aaKnown RBP5.41□□□□□ -1.54
SCAF4-204ENST00000467731 SRSF4Q08170 494 aaKnown RBP5.41□□□□□ -1.54
SCAF4-204ENST00000467731 C11orf87Q6NUJ2 197 aa5.41□□□□□ -1.54
SCAF4-204ENST00000467731 COMMD1Q8N668 190 aa5.41□□□□□ -1.54
SCAF4-204ENST00000467731 OR52E5Q8NH55 327 aa5.41□□□□□ -1.54
SCAF4-204ENST00000467731 ARPC1AQ92747 370 aa5.41□□□□□ -1.54
SCAF4-204ENST00000467731 JMJD8Q96S16 334 aa5.41□□□□□ -1.54
SCAF4-204ENST00000467731 NPFFR1Q9GZQ6 430 aa5.41□□□□□ -1.54
SCAF4-204ENST00000467731 PARP11Q9NR21 331 aa5.41□□□□□ -1.54
SCAF4-204ENST00000467731 NDUFA4L2Q9NRX3 87 aa5.41□□□□□ -1.54
SCAF4-204ENST00000467731 RCL1Q9Y2P8 373 aaKnown RBP5.41□□□□□ -1.54
SCAF4-204ENST00000467731 LSM5Q9Y4Y9 91 aaKnown RBP5.41□□□□□ -1.54
SCAF4-204ENST00000467731 TRAV14DV4A0A0A6YYC5 116 aa5.41□□□□□ -1.54
SCAF4-204ENST00000467731 TRBV7-9A0A0J9YWB2 115 aa5.41□□□□□ -1.54
SCAF4-204ENST00000467731 MSGN1A6NI15 193 aa5.41□□□□□ -1.54
SCAF4-204ENST00000467731 C9JQL5 133 aa5.41□□□□□ -1.54
SCAF4-204ENST00000467731 FAM90A26D6RGX4 464 aa5.41□□□□□ -1.54
SCAF4-204ENST00000467731 ATP6V0E1O15342 81 aa5.41□□□□□ -1.54
SCAF4-204ENST00000467731 SSSCA1O60232 199 aa5.41□□□□□ -1.54
SCAF4-204ENST00000467731 IGHG2P01859 326 aa5.41□□□□□ -1.54
SCAF4-204ENST00000467731 CKS1BP61024 79 aa5.41□□□□□ -1.54
SCAF4-204ENST00000467731 RHOGP84095 191 aa5.41□□□□□ -1.54
SCAF4-204ENST00000467731 PRCDQ00LT1 54 aa5.41□□□□□ -1.54
SCAF4-204ENST00000467731 PDLIM3Q53GG5 364 aaPredicted RBP5.41□□□□□ -1.54
SCAF4-204ENST00000467731 FRZBQ92765 325 aa5.41□□□□□ -1.54
SCAF4-204ENST00000467731 RBKSQ9H477 322 aa5.41□□□□□ -1.54
SCAF4-204ENST00000467731 OR5AC2Q9NZP5 309 aa5.41□□□□□ -1.54
SCAF4-204ENST00000467731 CEBPZOSA8MTT3 80 aa5.4□□□□□ -1.54
SCAF4-204ENST00000467731 TEX22C9J3V5 150 aa5.4□□□□□ -1.54
SCAF4-204ENST00000467731 K7EPK0 472 aa5.4□□□□□ -1.54
SCAF4-204ENST00000467731 SYNGR2O43760 224 aa5.4□□□□□ -1.54
SCAF4-204ENST00000467731 SCGB1D1O95968 90 aa5.4□□□□□ -1.54
SCAF4-204ENST00000467731 OR13C7P0DN81 318 aa5.4□□□□□ -1.54
SCAF4-204ENST00000467731 IAPPP10997 89 aa5.4□□□□□ -1.54
SCAF4-204ENST00000467731 LFNGQ8NES3 379 aa5.4□□□□□ -1.54
SCAF4-204ENST00000467731 CIB3Q96Q77 187 aaPredicted RBP5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 119 ms