RNA–Protein interactions for RNA: ENST00000467318.5

DDX56-208, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,665 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-208ENST00000467318 DEFA4P12838 97 aa11.54□□□□□ -0.56
DDX56-208ENST00000467318 CEBPGP53567 150 aa11.54□□□□□ -0.56
DDX56-208ENST00000467318 VWC2Q2TAL6 325 aa11.54□□□□□ -0.56
DDX56-208ENST00000467318 LCN15Q6UWW0 184 aa11.54□□□□□ -0.56
DDX56-208ENST00000467318 OR5T1Q8NG75 326 aa11.54□□□□□ -0.56
DDX56-208ENST00000467318 OR1L6Q8NGR2 347 aa11.54□□□□□ -0.56
DDX56-208ENST00000467318 WIPF2Q8TF74 440 aaPredicted RBP11.54□□□□□ -0.56
DDX56-208ENST00000467318 C12orf57Q99622 126 aa11.54□□□□□ -0.56
DDX56-208ENST00000467318 ACTR3CQ9C0K3 210 aaPredicted RBP11.54□□□□□ -0.56
DDX56-208ENST00000467318 CTDSP1Q9GZU7 261 aa11.54□□□□□ -0.56
DDX56-208ENST00000467318 HEYLQ9NQ87 328 aaPredicted RBP11.54□□□□□ -0.56
DDX56-208ENST00000467318 UBE2L5PA0A1B0GUS4 154 aa11.53□□□□□ -0.56
DDX56-208ENST00000467318 HAX1O00165 279 aa11.53□□□□□ -0.56
DDX56-208ENST00000467318 ELANEP08246 267 aa11.53□□□□□ -0.56
DDX56-208ENST00000467318 SUB1P53999 127 aaKnown RBP eCLIP11.53□□□□□ -0.56
DDX56-208ENST00000467318 ATP5IP56385 69 aaPredicted RBP11.53□□□□□ -0.56
DDX56-208ENST00000467318 RAB11AP62491 216 aa11.53□□□□□ -0.56
DDX56-208ENST00000467318 ZNF114Q8NC26 417 aa11.53□□□□□ -0.56
DDX56-208ENST00000467318 OR5AU1Q8NGC0 362 aa11.53□□□□□ -0.56
DDX56-208ENST00000467318 MANBALQ9NQG1 85 aa11.53□□□□□ -0.56
DDX56-208ENST00000467318 ZFP92A6NM28 416 aa11.52□□□□□ -0.56
DDX56-208ENST00000467318 PMS2P5A8MQ11 134 aa11.52□□□□□ -0.56
DDX56-208ENST00000467318 REG1AP05451 166 aa11.52□□□□□ -0.56
DDX56-208ENST00000467318 PSMB8P28062 276 aa11.52□□□□□ -0.56
DDX56-208ENST00000467318 PSMB3P49720 205 aa11.52□□□□□ -0.56
DDX56-208ENST00000467318 FOXE3Q13461 319 aa11.52□□□□□ -0.56
DDX56-208ENST00000467318 ZNF726P1Q15940 193 aa11.52□□□□□ -0.56
DDX56-208ENST00000467318 OR4X2Q8NGF9 303 aa11.52□□□□□ -0.56
DDX56-208ENST00000467318 OR1P1Q8NH06 330 aa11.52□□□□□ -0.56
DDX56-208ENST00000467318 GGACTQ9BVM4 153 aa11.52□□□□□ -0.56
DDX56-208ENST00000467318 ZNF355PQ9NSJ1 428 aa11.52□□□□□ -0.56
DDX56-208ENST00000467318 F11RQ9Y624 299 aaKnown RBP11.52□□□□□ -0.56
DDX56-208ENST00000467318 MPDU1O75352 247 aa11.52□□□□□ -0.57
DDX56-208ENST00000467318 SMIM6P0DI80 62 aa11.52□□□□□ -0.57
DDX56-208ENST00000467318 HIST1H1BP16401 226 aaKnown RBP11.52□□□□□ -0.57
DDX56-208ENST00000467318 FGF7P21781 194 aa11.52□□□□□ -0.57
DDX56-208ENST00000467318 KLK9Q2XQG4 91 aa11.52□□□□□ -0.57
DDX56-208ENST00000467318 BSXQ3C1V8 233 aa11.52□□□□□ -0.57
DDX56-208ENST00000467318 RNF152Q8N8N0 203 aa11.52□□□□□ -0.57
DDX56-208ENST00000467318 VSIRQ9H7M9 311 aa11.52□□□□□ -0.57
DDX56-208ENST00000467318 THYN1Q9P016 225 aa11.52□□□□□ -0.57
DDX56-208ENST00000467318 KLK9Q9UKQ9 250 aa11.52□□□□□ -0.57
DDX56-208ENST00000467318 TMEM250H0YL14 139 aa11.51□□□□□ -0.57
DDX56-208ENST00000467318 RPS10P46783 165 aaKnown RBP11.51□□□□□ -0.57
DDX56-208ENST00000467318 RAB9AP51151 201 aa11.51□□□□□ -0.57
DDX56-208ENST00000467318 ACOT6Q3I5F7 207 aaPredicted RBP11.51□□□□□ -0.57
DDX56-208ENST00000467318 FAM90A2PQ658T7 463 aa11.51□□□□□ -0.57
DDX56-208ENST00000467318 SLC24A4Q8NFF2 622 aa11.51□□□□□ -0.57
DDX56-208ENST00000467318 OR10G9Q8NGN4 311 aa11.51□□□□□ -0.57
DDX56-208ENST00000467318 OR10G7Q8NGN6 311 aa11.51□□□□□ -0.57
DDX56-208ENST00000467318 SDF2L1Q9HCN8 221 aa11.51□□□□□ -0.57
DDX56-208ENST00000467318 TRBV9A0A0B4J1U6 114 aa11.5□□□□□ -0.57
DDX56-208ENST00000467318 EIF3GO75821 320 aaKnown RBP eCLIP11.5□□□□□ -0.57
DDX56-208ENST00000467318 IFNA10P01566 189 aa11.5□□□□□ -0.57
DDX56-208ENST00000467318 PF4V1P10720 104 aa11.5□□□□□ -0.57
DDX56-208ENST00000467318 ELLP55199 621 aaPredicted RBP11.5□□□□□ -0.57
DDX56-208ENST00000467318 ELOBQ15370 118 aa11.5□□□□□ -0.57
DDX56-208ENST00000467318 HIST2H2BDQ6DRA6 164 aa11.5□□□□□ -0.57
DDX56-208ENST00000467318 C10orf99Q6UWK7 81 aa11.5□□□□□ -0.57
DDX56-208ENST00000467318 WFDC12Q8WWY7 111 aa11.5□□□□□ -0.57
DDX56-208ENST00000467318 NAT8Q9UHE5 227 aa11.5□□□□□ -0.57
DDX56-208ENST00000467318 IGLV11-55A0A075B6I3 123 aa11.49□□□□□ -0.57
DDX56-208ENST00000467318 SMCO3A2RU48 225 aa11.49□□□□□ -0.57
DDX56-208ENST00000467318 CORTO00230 105 aa11.49□□□□□ -0.57
DDX56-208ENST00000467318 RNASE2P10153 161 aaKnown RBP11.49□□□□□ -0.57
DDX56-208ENST00000467318 RND2P52198 227 aa11.49□□□□□ -0.57
DDX56-208ENST00000467318 C2orf83Q53S99 150 aa11.49□□□□□ -0.57
DDX56-208ENST00000467318 FFAR4Q5NUL3 377 aa11.49□□□□□ -0.57
DDX56-208ENST00000467318 RPP25LQ8N5L8 163 aaKnown RBP11.49□□□□□ -0.57
DDX56-208ENST00000467318 NECAP1Q8NC96 275 aa11.49□□□□□ -0.57
DDX56-208ENST00000467318 FANCD2OSQ96PS1 177 aa11.49□□□□□ -0.57
DDX56-208ENST00000467318 A0A0G2JLM5 398 aa11.49□□□□□ -0.57
DDX56-208ENST00000467318 FAM223BA6NKX1 122 aa11.49□□□□□ -0.57
DDX56-208ENST00000467318 ZNF727A8MUV8 499 aa11.49□□□□□ -0.57
DDX56-208ENST00000467318 TRGV3P03979 118 aa11.49□□□□□ -0.57
DDX56-208ENST00000467318 NPY1RP25929 384 aa11.49□□□□□ -0.57
DDX56-208ENST00000467318 FGF8P55075 233 aaPredicted RBP11.49□□□□□ -0.57
DDX56-208ENST00000467318 MEF2BQ02080 365 aaPredicted RBP11.49□□□□□ -0.57
DDX56-208ENST00000467318 FABP9Q0Z7S8 132 aa11.49□□□□□ -0.57
DDX56-208ENST00000467318 TMEM241Q24JQ0 296 aa11.49□□□□□ -0.57
DDX56-208ENST00000467318 PVRIGQ6DKI7 326 aa11.49□□□□□ -0.57
DDX56-208ENST00000467318 FAM223AQ8IWN6 122 aa11.49□□□□□ -0.57
DDX56-208ENST00000467318 USMG5Q96IX5 58 aa11.49□□□□□ -0.57
DDX56-208ENST00000467318 MS4A10Q96PG2 267 aa11.49□□□□□ -0.57
DDX56-208ENST00000467318 NPCDR1Q9BY65 106 aa11.49□□□□□ -0.57
DDX56-208ENST00000467318 KLK15Q9H2R5 256 aa11.49□□□□□ -0.57
DDX56-208ENST00000467318 KCNIP2Q9NS61 270 aa11.49□□□□□ -0.57
DDX56-208ENST00000467318 TPPP2P59282 170 aa11.48□□□□□ -0.57
DDX56-208ENST00000467318 RHOGP84095 191 aa11.48□□□□□ -0.57
DDX56-208ENST00000467318 KIAA0141Q14154 515 aaPredicted RBP11.48□□□□□ -0.57
DDX56-208ENST00000467318 ZNF674Q2M3X9 581 aa11.48□□□□□ -0.57
DDX56-208ENST00000467318 ACSM6Q6P461 480 aa11.48□□□□□ -0.57
DDX56-208ENST00000467318 MYOZ3Q8TDC0 251 aa11.48□□□□□ -0.57
DDX56-208ENST00000467318 TXNDC17Q9BRA2 123 aa11.48□□□□□ -0.57
DDX56-208ENST00000467318 DMRT1Q9Y5R6 373 aa11.48□□□□□ -0.57
DDX56-208ENST00000467318 TENM1Q9UKZ4 2725 aa11.47□□□□□ -0.57
DDX56-208ENST00000467318 RPLP1P05386 114 aaKnown RBP11.47□□□□□ -0.57
DDX56-208ENST00000467318 MFAP2P55001 183 aa11.47□□□□□ -0.57
DDX56-208ENST00000467318 TCTEX1D4Q5JR98 221 aa11.47□□□□□ -0.57
DDX56-208ENST00000467318 C19orf35Q6ZS72 473 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms