RNA–Protein interactions for RNA: ENST00000465525.6

PTPRU-206, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 1,650 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-206ENST00000465525 CDX1P47902 265 aaPredicted RBP13.25□□□□□ -0.29
PTPRU-206ENST00000465525 EIF5AP63241 154 aaKnown RBP13.25□□□□□ -0.29
PTPRU-206ENST00000465525 ZNF616Q08AN1 781 aa13.25□□□□□ -0.29
PTPRU-206ENST00000465525 C8orf86Q6ZUL3 223 aa13.25□□□□□ -0.29
PTPRU-206ENST00000465525 C3orf56Q8N813 242 aa13.25□□□□□ -0.29
PTPRU-206ENST00000465525 GNPNAT1Q96EK6 184 aaPredicted RBP13.25□□□□□ -0.29
PTPRU-206ENST00000465525 MDFIQ99750 246 aa13.25□□□□□ -0.29
PTPRU-206ENST00000465525 GAR1Q9NY12 217 aaKnown RBP13.25□□□□□ -0.29
PTPRU-206ENST00000465525 TSSC4Q9Y5U2 329 aaPredicted RBP13.25□□□□□ -0.29
PTPRU-206ENST00000465525 IGHV4OR15-8A0A075B7B6 117 aa13.24□□□□□ -0.29
PTPRU-206ENST00000465525 A0A087WW49 117 aa13.24□□□□□ -0.29
PTPRU-206ENST00000465525 I3L521 148 aa13.24□□□□□ -0.29
PTPRU-206ENST00000465525 RD3LP0DJH9 198 aa13.24□□□□□ -0.29
PTPRU-206ENST00000465525 SPP1P10451 314 aa13.24□□□□□ -0.29
PTPRU-206ENST00000465525 RAB14P61106 215 aa13.24□□□□□ -0.29
PTPRU-206ENST00000465525 NSUN5P1Q3KNT7 163 aa13.24□□□□□ -0.29
PTPRU-206ENST00000465525 KRTAP21-3Q3LHN1 58 aa13.24□□□□□ -0.29
PTPRU-206ENST00000465525 GCSAMLQ5JQS6 135 aa13.24□□□□□ -0.29
PTPRU-206ENST00000465525 FFAR4Q5NUL3 377 aa13.24□□□□□ -0.29
PTPRU-206ENST00000465525 FAM74A1Q5RGS3 127 aa13.24□□□□□ -0.29
PTPRU-206ENST00000465525 C4orf3Q8WVX3 66 aa13.24□□□□□ -0.29
PTPRU-206ENST00000465525 CITED1Q99966 193 aa13.24□□□□□ -0.29
PTPRU-206ENST00000465525 VSIRQ9H7M9 311 aa13.24□□□□□ -0.29
PTPRU-206ENST00000465525 DOK5Q9P104 306 aa13.24□□□□□ -0.29
PTPRU-206ENST00000465525 B2MP61769 119 aa13.24□□□□□ -0.29
PTPRU-206ENST00000465525 PRR20EP86478 221 aa13.24□□□□□ -0.29
PTPRU-206ENST00000465525 PRR20CP86479 221 aa13.24□□□□□ -0.29
PTPRU-206ENST00000465525 PRR20DP86480 221 aa13.24□□□□□ -0.29
PTPRU-206ENST00000465525 PRR20BP86481 221 aa13.24□□□□□ -0.29
PTPRU-206ENST00000465525 PRR20AP86496 221 aa13.24□□□□□ -0.29
PTPRU-206ENST00000465525 SLC39A9Q9NUM3 307 aa13.24□□□□□ -0.29
PTPRU-206ENST00000465525 TIMM9Q9Y5J7 89 aa13.24□□□□□ -0.29
PTPRU-206ENST00000465525 YIF1AO95070 293 aa13.23□□□□□ -0.29
PTPRU-206ENST00000465525 TOMM40O96008 361 aa13.23□□□□□ -0.29
PTPRU-206ENST00000465525 RPL29P47914 159 aaKnown RBP13.23□□□□□ -0.29
PTPRU-206ENST00000465525 YPEL3P61236 119 aaPredicted RBP13.23□□□□□ -0.29
PTPRU-206ENST00000465525 LYZP61626 148 aa13.23□□□□□ -0.29
PTPRU-206ENST00000465525 SPSB3Q6PJ21 355 aa13.23□□□□□ -0.29
PTPRU-206ENST00000465525 RCC1LQ96I51 464 aaKnown RBP13.23□□□□□ -0.29
PTPRU-206ENST00000465525 PSMG3Q9BT73 122 aaPredicted RBP13.23□□□□□ -0.29
PTPRU-206ENST00000465525 PBDC1Q9BVG4 233 aa13.23□□□□□ -0.29
PTPRU-206ENST00000465525 PUS1Q9Y606 427 aaKnown RBP eCLIP13.23□□□□□ -0.29
PTPRU-206ENST00000465525 ADARB2-AS1A8MUL3 147 aa13.22□□□□□ -0.29
PTPRU-206ENST00000465525 SCGB2A1O75556 95 aa13.22□□□□□ -0.29
PTPRU-206ENST00000465525 EIF3GO75821 320 aaKnown RBP eCLIP13.22□□□□□ -0.29
PTPRU-206ENST00000465525 TSPAN15O95858 294 aa13.22□□□□□ -0.29
PTPRU-206ENST00000465525 RAB2AP61019 212 aa13.22□□□□□ -0.29
PTPRU-206ENST00000465525 CLLU1Q5K131 121 aa13.22□□□□□ -0.29
PTPRU-206ENST00000465525 OR51G1Q8NGK1 321 aa13.22□□□□□ -0.29
PTPRU-206ENST00000465525 ATP6V0BQ99437 205 aa13.22□□□□□ -0.29
PTPRU-206ENST00000465525 GGCTO75223 188 aaKnown RBP13.21□□□□□ -0.29
PTPRU-206ENST00000465525 IL4P05112 153 aa13.21□□□□□ -0.29
PTPRU-206ENST00000465525 FABP1P07148 127 aa13.21□□□□□ -0.29
PTPRU-206ENST00000465525 SEC11BP0C7V7 166 aa13.21□□□□□ -0.29
PTPRU-206ENST00000465525 ORM2P19652 201 aa13.21□□□□□ -0.29
PTPRU-206ENST00000465525 SELENOTP62341 195 aa13.21□□□□□ -0.29
PTPRU-206ENST00000465525 TOMM20LQ6UXN7 152 aa13.21□□□□□ -0.29
PTPRU-206ENST00000465525 ZNF600Q6ZNG1 722 aa13.21□□□□□ -0.29
PTPRU-206ENST00000465525 NDUFA11Q86Y39 141 aa13.21□□□□□ -0.29
PTPRU-206ENST00000465525 OR11H1Q8NG94 326 aa13.21□□□□□ -0.29
PTPRU-206ENST00000465525 OR1B1Q8NGR6 318 aa13.21□□□□□ -0.29
PTPRU-206ENST00000465525 Q8WTZ3 238 aa13.21□□□□□ -0.29
PTPRU-206ENST00000465525 ZNF207O43670 478 aaKnown RBP13.21□□□□□ -0.3
PTPRU-206ENST00000465525 HSPB1P04792 205 aaKnown RBP13.21□□□□□ -0.3
PTPRU-206ENST00000465525 SLURP1P55000 103 aa13.21□□□□□ -0.3
PTPRU-206ENST00000465525 SHISA2Q6UWI4 295 aa13.21□□□□□ -0.3
PTPRU-206ENST00000465525 UNQ9165/PRO28630Q6UXU0 137 aa13.21□□□□□ -0.3
PTPRU-206ENST00000465525 OR1N2Q8NGR9 330 aa13.21□□□□□ -0.3
PTPRU-206ENST00000465525 RAX2Q96IS3 184 aa13.21□□□□□ -0.3
PTPRU-206ENST00000465525 C20orf24Q9BUV8 137 aa13.21□□□□□ -0.3
PTPRU-206ENST00000465525 KCNIP2Q9NS61 270 aa13.21□□□□□ -0.3
PTPRU-206ENST00000465525 LINC00862A6NCI5 91 aa13.2□□□□□ -0.3
PTPRU-206ENST00000465525 OR5G3P0C626 314 aa13.2□□□□□ -0.3
PTPRU-206ENST00000465525 FHITP49789 147 aa13.2□□□□□ -0.3
PTPRU-206ENST00000465525 RELQ04864 619 aaPredicted RBP13.2□□□□□ -0.3
PTPRU-206ENST00000465525 USF2Q15853 346 aaPredicted RBP13.2□□□□□ -0.3
PTPRU-206ENST00000465525 RPEL1Q2QD12 228 aa13.2□□□□□ -0.3
PTPRU-206ENST00000465525 FAM209BQ5JX69 171 aa13.2□□□□□ -0.3
PTPRU-206ENST00000465525 ZFAND3Q9H8U3 227 aa13.2□□□□□ -0.3
PTPRU-206ENST00000465525 WI2-2373I1.2A0A1W2PRP0 233 aa13.19□□□□□ -0.3
PTPRU-206ENST00000465525 ZNF320A2RRD8 509 aa13.19□□□□□ -0.3
PTPRU-206ENST00000465525 HOXD3P31249 432 aaPredicted RBP13.19□□□□□ -0.3
PTPRU-206ENST00000465525 AKR1C8PQ5T2L2 129 aa13.19□□□□□ -0.3
PTPRU-206ENST00000465525 PATE2Q6UY27 113 aa13.19□□□□□ -0.3
PTPRU-206ENST00000465525 Q6ZRG5 221 aa13.19□□□□□ -0.3
PTPRU-206ENST00000465525 PCNPQ8WW12 178 aaKnown RBP13.19□□□□□ -0.3
PTPRU-206ENST00000465525 DPF1Q92782 380 aa13.19□□□□□ -0.3
PTPRU-206ENST00000465525 RNF125Q96EQ8 232 aa13.19□□□□□ -0.3
PTPRU-206ENST00000465525 UHRF2Q96PU4 802 aa13.19□□□□□ -0.3
PTPRU-206ENST00000465525 LINC01619G3V211 115 aa13.18□□□□□ -0.3
PTPRU-206ENST00000465525 COX7A2P2O60397 106 aa13.18□□□□□ -0.3
PTPRU-206ENST00000465525 SERF2P84101 59 aa13.18□□□□□ -0.3
PTPRU-206ENST00000465525 EIF5AL1Q6IS14 154 aaKnown RBP13.18□□□□□ -0.3
PTPRU-206ENST00000465525 FAM122CQ6P4D5 195 aa13.18□□□□□ -0.3
PTPRU-206ENST00000465525 OR10G4Q8NGN3 311 aa13.18□□□□□ -0.3
PTPRU-206ENST00000465525 OR10G9Q8NGN4 311 aa13.18□□□□□ -0.3
PTPRU-206ENST00000465525 OR10G7Q8NGN6 311 aa13.18□□□□□ -0.3
PTPRU-206ENST00000465525 TMEM37Q8WXS4 190 aa13.18□□□□□ -0.3
PTPRU-206ENST00000465525 PHYHIPLQ96FC7 376 aa13.18□□□□□ -0.3
PTPRU-206ENST00000465525 RPRMQ9NS64 109 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms