RNA–Protein interactions for RNA: ENST00000464313.1

PTPN12-210, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 4

Gene PTPN12, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-210ENST00000464313 SLAMF6Q96DU3 332 aa0.69□□□□□ -2.3
PTPN12-210ENST00000464313 TVP23BQ9NYZ1 205 aa0.69□□□□□ -2.3
PTPN12-210ENST00000464313 PIK3C2GO75747 1445 aa0.69□□□□□ -2.3
PTPN12-210ENST00000464313 TAF1LQ8IZX4 1826 aa0.68□□□□□ -2.3
PTPN12-210ENST00000464313 MCM3APO60318 1980 aa0.68□□□□□ -2.3
PTPN12-210ENST00000464313 DENND4CQ5VZ89 1909 aa0.68□□□□□ -2.3
PTPN12-210ENST00000464313 GADD45GO95257 159 aa0.68□□□□□ -2.3
PTPN12-210ENST00000464313 SERPINB9P50453 376 aa0.68□□□□□ -2.3
PTPN12-210ENST00000464313 DYNLT1P63172 113 aa0.68□□□□□ -2.3
PTPN12-210ENST00000464313 HIST1H3AP68431 136 aa0.68□□□□□ -2.3
PTPN12-210ENST00000464313 H3F3AP84243 136 aa0.68□□□□□ -2.3
PTPN12-210ENST00000464313 RGS21Q2M5E4 152 aa0.68□□□□□ -2.3
PTPN12-210ENST00000464313 MPV17LQ2QL34 196 aa0.68□□□□□ -2.3
PTPN12-210ENST00000464313 Q8IYB0 196 aa0.68□□□□□ -2.3
PTPN12-210ENST00000464313 Q8N6K4 173 aa0.68□□□□□ -2.3
PTPN12-210ENST00000464313 OR2T10Q8NGZ9 312 aa0.68□□□□□ -2.3
PTPN12-210ENST00000464313 AMELYQ99218 206 aa0.68□□□□□ -2.3
PTPN12-210ENST00000464313 SIGMAR1Q99720 223 aa0.68□□□□□ -2.3
PTPN12-210ENST00000464313 PRADC1Q9BSG0 188 aa0.68□□□□□ -2.3
PTPN12-210ENST00000464313 TMEM133Q9H2Q1 129 aa0.68□□□□□ -2.3
PTPN12-210ENST00000464313 SBF1O95248 1867 aa0.67□□□□□ -2.3
PTPN12-210ENST00000464313 ADGRB2O60241 1585 aa0.67□□□□□ -2.3
PTPN12-210ENST00000464313 TMEM114B3SHH9 223 aa0.67□□□□□ -2.3
PTPN12-210ENST00000464313 HAND1O96004 215 aa0.67□□□□□ -2.3
PTPN12-210ENST00000464313 DNAL4O96015 105 aa0.67□□□□□ -2.3
PTPN12-210ENST00000464313 RNASE4P34096 147 aaKnown RBP0.67□□□□□ -2.3
PTPN12-210ENST00000464313 ANP32AP39687 249 aaKnown RBP0.67□□□□□ -2.3
PTPN12-210ENST00000464313 AP3S2P59780 193 aa0.67□□□□□ -2.3
PTPN12-210ENST00000464313 EIF5AP63241 154 aaKnown RBP0.67□□□□□ -2.3
PTPN12-210ENST00000464313 FAM172AQ8WUF8 416 aa0.67□□□□□ -2.3
PTPN12-210ENST00000464313 BORCS5Q969J3 196 aa0.67□□□□□ -2.3
PTPN12-210ENST00000464313 PRAP1Q96NZ9 151 aa0.67□□□□□ -2.3
PTPN12-210ENST00000464313 CCL25O15444 150 aa0.66□□□□□ -2.3
PTPN12-210ENST00000464313 SLC30A7Q8NEW0 376 aa0.66□□□□□ -2.3
PTPN12-210ENST00000464313 OR2T35Q8NGX2 323 aa0.66□□□□□ -2.3
PTPN12-210ENST00000464313 TEX47Q8TBZ9 253 aa0.66□□□□□ -2.3
PTPN12-210ENST00000464313 C14orf132Q9NPU4 83 aa0.66□□□□□ -2.3
PTPN12-210ENST00000464313 MYO3BQ8WXR4 1341 aa0.65□□□□□ -2.3
PTPN12-210ENST00000464313 RIMBP3CA6NJZ7 1639 aa0.65□□□□□ -2.31
PTPN12-210ENST00000464313 RIMBP3BA6NNM3 1639 aa0.65□□□□□ -2.31
PTPN12-210ENST00000464313 RIMBP3Q9UFD9 1639 aa0.65□□□□□ -2.31
PTPN12-210ENST00000464313 CCL16O15467 120 aa0.65□□□□□ -2.31
PTPN12-210ENST00000464313 KLF7O75840 302 aaPredicted RBP0.65□□□□□ -2.31
PTPN12-210ENST00000464313 SRP14P37108 136 aaKnown RBP0.65□□□□□ -2.31
PTPN12-210ENST00000464313 C4orf3Q8WVX3 66 aa0.65□□□□□ -2.31
PTPN12-210ENST00000464313 KIFC1Q9BW19 673 aa0.65□□□□□ -2.31
PTPN12-210ENST00000464313 TAS2R7Q9NYW3 318 aa0.65□□□□□ -2.31
PTPN12-210ENST00000464313 SLC22A13Q9Y226 551 aa0.65□□□□□ -2.31
PTPN12-210ENST00000464313 CHCHD2Q9Y6H1 151 aaPredicted RBP0.65□□□□□ -2.31
PTPN12-210ENST00000464313 RTL1A6NKG5 1358 aa0.65□□□□□ -2.31
PTPN12-210ENST00000464313 CASP8AP2Q9UKL3 1982 aa0.65□□□□□ -2.31
PTPN12-210ENST00000464313 SCN8AQ9UQD0 1980 aa0.65□□□□□ -2.31
PTPN12-210ENST00000464313 ARHGEF28Q8N1W1 1705 aaKnown RBP0.64□□□□□ -2.31
PTPN12-210ENST00000464313 SNRNP200O75643 2136 aaKnown RBP0.64□□□□□ -2.31
PTPN12-210ENST00000464313 TIMM17BO60830 172 aa0.64□□□□□ -2.31
PTPN12-210ENST00000464313 OR7C1O76099 320 aaPredicted RBP0.64□□□□□ -2.31
PTPN12-210ENST00000464313 ERP29P30040 261 aaKnown RBP0.64□□□□□ -2.31
PTPN12-210ENST00000464313 PIGPP57054 158 aa0.64□□□□□ -2.31
PTPN12-210ENST00000464313 CCL7P80098 99 aa0.64□□□□□ -2.31
PTPN12-210ENST00000464313 KRR1Q13601 381 aaKnown RBP0.64□□□□□ -2.31
PTPN12-210ENST00000464313 FAM74A1Q5RGS3 127 aa0.64□□□□□ -2.31
PTPN12-210ENST00000464313 LYRM7Q5U5X0 104 aa0.64□□□□□ -2.31
PTPN12-210ENST00000464313 SBSPONQ8IVN8 264 aa0.64□□□□□ -2.31
PTPN12-210ENST00000464313 PDZD9Q8IXQ8 264 aa0.64□□□□□ -2.31
PTPN12-210ENST00000464313 PATE1Q8WXA2 126 aa0.64□□□□□ -2.31
PTPN12-210ENST00000464313 TMEM126AQ9H061 195 aa0.64□□□□□ -2.31
PTPN12-210ENST00000464313 RNF122Q9H9V4 155 aa0.64□□□□□ -2.31
PTPN12-210ENST00000464313 E9PCH4 1651 aa0.63□□□□□ -2.31
PTPN12-210ENST00000464313 TCRBV4S1A1TA0A5B7 111 aa0.63□□□□□ -2.31
PTPN12-210ENST00000464313 J3QRK9 145 aa0.63□□□□□ -2.31
PTPN12-210ENST00000464313 NCR3O14931 201 aa0.63□□□□□ -2.31
PTPN12-210ENST00000464313 DHFRP00374 187 aa0.63□□□□□ -2.31
PTPN12-210ENST00000464313 KRTAP19-3Q7Z4W3 81 aa0.63□□□□□ -2.31
PTPN12-210ENST00000464313 OR11H6Q8NGC7 330 aa0.63□□□□□ -2.31
PTPN12-210ENST00000464313 TMEM254Q8TBM7 123 aa0.63□□□□□ -2.31
PTPN12-210ENST00000464313 MYH7BA7E2Y1 1941 aa0.63□□□□□ -2.31
PTPN12-210ENST00000464313 NCOA1Q15788 1441 aa0.63□□□□□ -2.31
PTPN12-210ENST00000464313 MYH10P35580 1976 aa0.63□□□□□ -2.31
PTPN12-210ENST00000464313 TRAV4A0A0B4J268 109 aa0.62□□□□□ -2.31
PTPN12-210ENST00000464313 TRBV6-4A0A1B0GX49 114 aa0.62□□□□□ -2.31
PTPN12-210ENST00000464313 ATP5G3P48201 142 aa0.62□□□□□ -2.31
PTPN12-210ENST00000464313 SPA17Q15506 151 aa0.62□□□□□ -2.31
PTPN12-210ENST00000464313 RRN3P1Q2M238 152 aa0.62□□□□□ -2.31
PTPN12-210ENST00000464313 ST6GALNAC3Q8NDV1 305 aa0.62□□□□□ -2.31
PTPN12-210ENST00000464313 GNPDA2Q8TDQ7 276 aa0.62□□□□□ -2.31
PTPN12-210ENST00000464313 ITFG2Q969R8 447 aa0.62□□□□□ -2.31
PTPN12-210ENST00000464313 TLNRD1Q9H1K6 362 aa0.62□□□□□ -2.31
PTPN12-210ENST00000464313 FAM32AQ9Y421 112 aaKnown RBP0.62□□□□□ -2.31
PTPN12-210ENST00000464313 KIAA1549Q9HCM3 1950 aa0.61□□□□□ -2.31
PTPN12-210ENST00000464313 OBSL1O75147 1896 aa0.61□□□□□ -2.31
PTPN12-210ENST00000464313 B4DSR2 109 aa0.61□□□□□ -2.31
PTPN12-210ENST00000464313 EFNA4P52798 201 aa0.61□□□□□ -2.31
PTPN12-210ENST00000464313 ERVS71-1P61550 626 aa0.61□□□□□ -2.31
PTPN12-210ENST00000464313 PSG9Q00887 426 aa0.61□□□□□ -2.31
PTPN12-210ENST00000464313 DGCR14Q96DF8 476 aaKnown RBP0.61□□□□□ -2.31
PTPN12-210ENST00000464313 BTF3L4Q96K17 158 aa0.61□□□□□ -2.31
PTPN12-210ENST00000464313 GPER1Q99527 375 aa0.61□□□□□ -2.31
PTPN12-210ENST00000464313 NMNAT1Q9HAN9 279 aaPredicted RBP0.61□□□□□ -2.31
PTPN12-210ENST00000464313 ENY2Q9NPA8 101 aa0.61□□□□□ -2.31
PTPN12-210ENST00000464313 FAM159BA6NKW6 160 aa0.6□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms