RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 C16orf97H3BN30 126 aa2.93□□□□□ -1.94
COL8A1-205ENST00000463753 P04436 131 aa2.93□□□□□ -1.94
COL8A1-205ENST00000463753 ZNF688P0C7X2 276 aa2.93□□□□□ -1.94
COL8A1-205ENST00000463753 DSCR4P56555 118 aaPredicted RBP2.93□□□□□ -1.94
COL8A1-205ENST00000463753 FBXW4P57775 412 aa2.93□□□□□ -1.94
COL8A1-205ENST00000463753 CACNG7P62955 275 aa2.93□□□□□ -1.94
COL8A1-205ENST00000463753 C1orf61Q13536 156 aa2.93□□□□□ -1.94
COL8A1-205ENST00000463753 HRCT1Q6UXD1 115 aa2.93□□□□□ -1.94
COL8A1-205ENST00000463753 H2BFWTQ7Z2G1 175 aa2.93□□□□□ -1.94
COL8A1-205ENST00000463753 C10orf126Q8N4M7 172 aa2.93□□□□□ -1.94
COL8A1-205ENST00000463753 C10orf35Q96D05 121 aa2.93□□□□□ -1.94
COL8A1-205ENST00000463753 CHAC1Q9BUX1 264 aa2.93□□□□□ -1.94
COL8A1-205ENST00000463753 C1orf43Q9BWL3 253 aa2.93□□□□□ -1.94
COL8A1-205ENST00000463753 C21orf62Q9NYP8 219 aa2.93□□□□□ -1.94
COL8A1-205ENST00000463753 KLF12Q9Y4X4 402 aa2.93□□□□□ -1.94
COL8A1-205ENST00000463753 SCN3AQ9NY46 2000 aa2.93□□□□□ -1.94
COL8A1-205ENST00000463753 ACACBO00763 2458 aa2.93□□□□□ -1.94
COL8A1-205ENST00000463753 UBR5O95071 2799 aaPredicted RBP2.93□□□□□ -1.94
COL8A1-205ENST00000463753 PCNX3Q9H6A9 2034 aa2.93□□□□□ -1.94
COL8A1-205ENST00000463753 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa2.93□□□□□ -1.94
COL8A1-205ENST00000463753 A0A1W2PPV9 198 aa2.93□□□□□ -1.94
COL8A1-205ENST00000463753 C5orf63A6NC05 138 aa2.93□□□□□ -1.94
COL8A1-205ENST00000463753 MBD3L4A6NDZ8 208 aaPredicted RBP2.93□□□□□ -1.94
COL8A1-205ENST00000463753 MBD3L3A6NE82 208 aaPredicted RBP2.93□□□□□ -1.94
COL8A1-205ENST00000463753 MBD3L5A6NJ08 208 aaPredicted RBP2.93□□□□□ -1.94
COL8A1-205ENST00000463753 NPIPB6E9PJ23 425 aa2.93□□□□□ -1.94
COL8A1-205ENST00000463753 TMEM262E9PQX1 116 aa2.93□□□□□ -1.94
COL8A1-205ENST00000463753 H0YIG0 161 aa2.93□□□□□ -1.94
COL8A1-205ENST00000463753 J3KT08 172 aa2.93□□□□□ -1.94
COL8A1-205ENST00000463753 NPFFO15130 113 aa2.93□□□□□ -1.94
COL8A1-205ENST00000463753 PDCD6O75340 191 aa2.93□□□□□ -1.94
COL8A1-205ENST00000463753 ACTL6BO94805 426 aa2.93□□□□□ -1.94
COL8A1-205ENST00000463753 FAM106CPP0CH98 169 aa2.93□□□□□ -1.94
COL8A1-205ENST00000463753 MYOD1P15172 320 aa2.93□□□□□ -1.94
COL8A1-205ENST00000463753 SRD5A1P18405 259 aa2.93□□□□□ -1.94
COL8A1-205ENST00000463753 ERVK11-1P61568 191 aa2.93□□□□□ -1.94
COL8A1-205ENST00000463753 POLR2LP62875 67 aaKnown RBP2.93□□□□□ -1.94
COL8A1-205ENST00000463753 CST6Q15828 149 aa2.93□□□□□ -1.94
COL8A1-205ENST00000463753 FAM106AQ4KMX7 169 aa2.93□□□□□ -1.94
COL8A1-205ENST00000463753 HLA-DQA1Q5Y7H0 255 aa2.93□□□□□ -1.94
COL8A1-205ENST00000463753 TMEM211Q6ICI0 200 aa2.93□□□□□ -1.94
COL8A1-205ENST00000463753 RHBDD2Q6NTF9 364 aa2.93□□□□□ -1.94
COL8A1-205ENST00000463753 C22orf39Q6P5X5 142 aa2.93□□□□□ -1.94
COL8A1-205ENST00000463753 DGAT2L6Q6ZPD8 337 aa2.93□□□□□ -1.94
COL8A1-205ENST00000463753 ZNF645Q8N7E2 425 aa2.93□□□□□ -1.94
COL8A1-205ENST00000463753 BCORP1Q8N888 145 aa2.93□□□□□ -1.94
COL8A1-205ENST00000463753 NUP35Q8NFH5 326 aa2.93□□□□□ -1.94
COL8A1-205ENST00000463753 SSMEM1Q8WWF3 244 aa2.93□□□□□ -1.94
COL8A1-205ENST00000463753 PPDPFLQ8WWR9 84 aa2.93□□□□□ -1.94
COL8A1-205ENST00000463753 CHCHD1Q96BP2 118 aaKnown RBP2.93□□□□□ -1.94
COL8A1-205ENST00000463753 ZNF524Q96C55 264 aa2.93□□□□□ -1.94
COL8A1-205ENST00000463753 TMEM101Q96IK0 257 aa2.93□□□□□ -1.94
COL8A1-205ENST00000463753 CARD19Q96LW7 228 aa2.93□□□□□ -1.94
COL8A1-205ENST00000463753 RASL11BQ9BPW5 248 aa2.93□□□□□ -1.94
COL8A1-205ENST00000463753 EMC6Q9BV81 110 aa2.93□□□□□ -1.94
COL8A1-205ENST00000463753 PKIGQ9Y2B9 76 aa2.93□□□□□ -1.94
COL8A1-205ENST00000463753 SHANK1Q9Y566 2161 aa2.93□□□□□ -1.94
COL8A1-205ENST00000463753 PLXNA2O75051 1894 aa2.93□□□□□ -1.94
COL8A1-205ENST00000463753 MKI67P46013 3256 aaKnown RBP2.92□□□□□ -1.94
COL8A1-205ENST00000463753 KIR2DS1A0A191URI9 304 aa2.92□□□□□ -1.94
COL8A1-205ENST00000463753 SMIM27A0A1W2PRY6 76 aa2.92□□□□□ -1.94
COL8A1-205ENST00000463753 HIGD1CA8MV81 97 aa2.92□□□□□ -1.94
COL8A1-205ENST00000463753 FAM90A26D6RGX4 464 aa2.92□□□□□ -1.94
COL8A1-205ENST00000463753 F8WDY8 70 aa2.92□□□□□ -1.94
COL8A1-205ENST00000463753 PGLYRP1O75594 196 aaPredicted RBP2.92□□□□□ -1.94
COL8A1-205ENST00000463753 OR2H2O95918 312 aa2.92□□□□□ -1.94
COL8A1-205ENST00000463753 SP1P08047 785 aa2.92□□□□□ -1.94
COL8A1-205ENST00000463753 SCTP09683 121 aa2.92□□□□□ -1.94
COL8A1-205ENST00000463753 CDAP32320 146 aa2.92□□□□□ -1.94
COL8A1-205ENST00000463753 SEC61GP60059 68 aa2.92□□□□□ -1.94
COL8A1-205ENST00000463753 KLRB1Q12918 225 aa2.92□□□□□ -1.94
COL8A1-205ENST00000463753 KIR2DS1Q14954 304 aa2.92□□□□□ -1.94
COL8A1-205ENST00000463753 C9orf153Q5TBE3 101 aa2.92□□□□□ -1.94
COL8A1-205ENST00000463753 ZC2HC1BQ5TFG8 222 aa2.92□□□□□ -1.94
COL8A1-205ENST00000463753 HES3Q5TGS1 186 aa2.92□□□□□ -1.94
COL8A1-205ENST00000463753 PHLDA1Q8WV24 401 aaPredicted RBP2.92□□□□□ -1.94
COL8A1-205ENST00000463753 RND1Q92730 232 aa2.92□□□□□ -1.94
COL8A1-205ENST00000463753 DLX4Q92988 240 aaPredicted RBP2.92□□□□□ -1.94
COL8A1-205ENST00000463753 TXNIPQ9H3M7 391 aa2.92□□□□□ -1.94
COL8A1-205ENST00000463753 PIGLQ9Y2B2 252 aa2.92□□□□□ -1.94
COL8A1-205ENST00000463753 BRCA2P51587 3418 aa2.92□□□□□ -1.94
COL8A1-205ENST00000463753 LOC389332A0A1B0GUA5 103 aa2.92□□□□□ -1.94
COL8A1-205ENST00000463753 TCRBV4S1A1TA0A5B7 111 aa2.92□□□□□ -1.94
COL8A1-205ENST00000463753 C9JCJ5 164 aa2.92□□□□□ -1.94
COL8A1-205ENST00000463753 APOHP02749 345 aaPredicted RBP2.92□□□□□ -1.94
COL8A1-205ENST00000463753 FREM3P0C091 2139 aa2.92□□□□□ -1.94
COL8A1-205ENST00000463753 IGLC6P0CF74 106 aa2.92□□□□□ -1.94
COL8A1-205ENST00000463753 CA6P23280 308 aa2.92□□□□□ -1.94
COL8A1-205ENST00000463753 GCHFRP30047 84 aa2.92□□□□□ -1.94
COL8A1-205ENST00000463753 MALLQ13021 153 aa2.92□□□□□ -1.94
COL8A1-205ENST00000463753 MFAP5Q13361 173 aa2.92□□□□□ -1.94
COL8A1-205ENST00000463753 C4orf26Q17RF5 130 aa2.92□□□□□ -1.94
COL8A1-205ENST00000463753 C12orf74Q32Q52 190 aa2.92□□□□□ -1.94
COL8A1-205ENST00000463753 SPATA46Q5T0L3 261 aa2.92□□□□□ -1.94
COL8A1-205ENST00000463753 MIC13Q5XKP0 118 aa2.92□□□□□ -1.94
COL8A1-205ENST00000463753 ABCA7Q8IZY2 2146 aa2.92□□□□□ -1.94
COL8A1-205ENST00000463753 OR4C13Q8NGP0 309 aa2.92□□□□□ -1.94
COL8A1-205ENST00000463753 NT5CQ8TCD5 201 aa2.92□□□□□ -1.94
COL8A1-205ENST00000463753 PIGCQ92535 297 aa2.92□□□□□ -1.94
COL8A1-205ENST00000463753 RASL10AQ92737 203 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms