RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 IGLC7A0M8Q6 106 aa3.25□□□□□ -1.89
COPS3-204ENST00000462236 TMEM14DPA8MWL7 114 aa3.25□□□□□ -1.89
COPS3-204ENST00000462236 CREBL2O60519 120 aaPredicted RBP3.25□□□□□ -1.89
COPS3-204ENST00000462236 CRTAPO75718 401 aaPredicted RBP3.25□□□□□ -1.89
COPS3-204ENST00000462236 LALBAP00709 142 aa3.25□□□□□ -1.89
COPS3-204ENST00000462236 IFNA21P01568 189 aa3.25□□□□□ -1.89
COPS3-204ENST00000462236 IFNA17P01571 189 aa3.25□□□□□ -1.89
COPS3-204ENST00000462236 SRMP19623 302 aa3.25□□□□□ -1.89
COPS3-204ENST00000462236 CELP19835 753 aa3.25□□□□□ -1.89
COPS3-204ENST00000462236 MAS1LP35410 378 aa3.25□□□□□ -1.89
COPS3-204ENST00000462236 RPL27AP46776 148 aaKnown RBP3.25□□□□□ -1.89
COPS3-204ENST00000462236 GBX2P52951 348 aaPredicted RBP3.25□□□□□ -1.89
COPS3-204ENST00000462236 RPL32P62910 135 aaKnown RBP3.25□□□□□ -1.89
COPS3-204ENST00000462236 EIF4EBP1Q13541 118 aaPredicted RBP3.25□□□□□ -1.89
COPS3-204ENST00000462236 TPBGQ13641 420 aa3.25□□□□□ -1.89
COPS3-204ENST00000462236 ATP6AP1Q15904 470 aa3.25□□□□□ -1.89
COPS3-204ENST00000462236 PRR4Q16378 134 aa3.25□□□□□ -1.89
COPS3-204ENST00000462236 RTL8BQ17RB0 113 aa3.25□□□□□ -1.89
COPS3-204ENST00000462236 Q499Y3 187 aa3.25□□□□□ -1.89
COPS3-204ENST00000462236 PLET1Q6UQ28 207 aa3.25□□□□□ -1.89
COPS3-204ENST00000462236 ZNF767PQ75MW2 155 aa3.25□□□□□ -1.89
COPS3-204ENST00000462236 SSX9Q7RTT3 188 aa3.25□□□□□ -1.89
COPS3-204ENST00000462236 ACOT12Q8WYK0 555 aa3.25□□□□□ -1.89
COPS3-204ENST00000462236 CCDC124Q96CT7 223 aaKnown RBP3.25□□□□□ -1.89
COPS3-204ENST00000462236 SMIM19Q96E16 107 aa3.25□□□□□ -1.89
COPS3-204ENST00000462236 MRPL48Q96GC5 212 aaKnown RBP3.25□□□□□ -1.89
COPS3-204ENST00000462236 ADTRPQ96IZ2 230 aa3.25□□□□□ -1.89
COPS3-204ENST00000462236 MYCBPQ99417 103 aaPredicted RBP3.25□□□□□ -1.89
COPS3-204ENST00000462236 NICN1Q9BSH3 213 aa3.25□□□□□ -1.89
COPS3-204ENST00000462236 THTPAQ9BU02 230 aa3.25□□□□□ -1.89
COPS3-204ENST00000462236 OR2D2Q9H210 308 aa3.25□□□□□ -1.89
COPS3-204ENST00000462236 OR51E2Q9H255 320 aa3.25□□□□□ -1.89
COPS3-204ENST00000462236 AK3Q9UIJ7 227 aa3.25□□□□□ -1.89
COPS3-204ENST00000462236 IGLV8-61A0A075B6I0 122 aa3.24□□□□□ -1.89
COPS3-204ENST00000462236 IGHV7-4-1A0A0J9YVY3 117 aa3.24□□□□□ -1.89
COPS3-204ENST00000462236 G3V2T6 193 aa3.24□□□□□ -1.89
COPS3-204ENST00000462236 SERF1AO75920 110 aa3.24□□□□□ -1.89
COPS3-204ENST00000462236 CD3GP09693 182 aa3.24□□□□□ -1.89
COPS3-204ENST00000462236 UBBP0CG47 229 aa3.24□□□□□ -1.89
COPS3-204ENST00000462236 ANXA3P12429 323 aa3.24□□□□□ -1.89
COPS3-204ENST00000462236 RPA2P15927 270 aa3.24□□□□□ -1.89
COPS3-204ENST00000462236 SERPINB10P48595 397 aa3.24□□□□□ -1.89
COPS3-204ENST00000462236 ARFRP1Q13795 201 aa3.24□□□□□ -1.89
COPS3-204ENST00000462236 OXA1LQ15070 435 aa3.24□□□□□ -1.89
COPS3-204ENST00000462236 LINC01620Q4KN68 170 aa3.24□□□□□ -1.89
COPS3-204ENST00000462236 C1orf100Q5SVJ3 147 aa3.24□□□□□ -1.89
COPS3-204ENST00000462236 OR10K2Q6IF99 312 aa3.24□□□□□ -1.89
COPS3-204ENST00000462236 UBE2DNLQ8IWF7 75 aa3.24□□□□□ -1.89
COPS3-204ENST00000462236 JAGN1Q8N5M9 183 aa3.24□□□□□ -1.89
COPS3-204ENST00000462236 FAM24BQ8N5W8 94 aa3.24□□□□□ -1.89
COPS3-204ENST00000462236 OR52I1Q8NGK6 324 aa3.24□□□□□ -1.89
COPS3-204ENST00000462236 OR4A4PQ8NGN8 299 aa3.24□□□□□ -1.89
COPS3-204ENST00000462236 GIMAP1Q8WWP7 306 aa3.24□□□□□ -1.89
COPS3-204ENST00000462236 DGCR14Q96DF8 476 aaKnown RBP3.24□□□□□ -1.89
COPS3-204ENST00000462236 DERL3Q96Q80 235 aa3.24□□□□□ -1.89
COPS3-204ENST00000462236 SLC29A1Q99808 456 aa3.24□□□□□ -1.89
COPS3-204ENST00000462236 RHPN1-AS1Q9BWJ2 59 aa3.24□□□□□ -1.89
COPS3-204ENST00000462236 TMEM59Q9BXS4 323 aa3.24□□□□□ -1.89
COPS3-204ENST00000462236 RNF167Q9H6Y7 350 aa3.24□□□□□ -1.89
COPS3-204ENST00000462236 VSIRQ9H7M9 311 aa3.24□□□□□ -1.89
COPS3-204ENST00000462236 FGF20Q9NP95 211 aaPredicted RBP3.24□□□□□ -1.89
COPS3-204ENST00000462236 SMPD3Q9NY59 655 aaPredicted RBP3.24□□□□□ -1.89
COPS3-204ENST00000462236 TBC1D24Q9ULP9 559 aa3.24□□□□□ -1.89
COPS3-204ENST00000462236 OR2T8A6NH00 312 aa3.23□□□□□ -1.89
COPS3-204ENST00000462236 ZNF705FA8MVS1 300 aaPredicted RBP3.23□□□□□ -1.89
COPS3-204ENST00000462236 KLLNB2CW77 178 aa3.23□□□□□ -1.89
COPS3-204ENST00000462236 TRDCB7Z8K6 153 aa3.23□□□□□ -1.89
COPS3-204ENST00000462236 E9PLD3 99 aa3.23□□□□□ -1.89
COPS3-204ENST00000462236 K7EIM0 57 aa3.23□□□□□ -1.89
COPS3-204ENST00000462236 SOCS1O15524 211 aa3.23□□□□□ -1.89
COPS3-204ENST00000462236 ZNF207O43670 478 aaKnown RBP3.23□□□□□ -1.89
COPS3-204ENST00000462236 DHFRP00374 187 aa3.23□□□□□ -1.89
COPS3-204ENST00000462236 CD5P06127 495 aa3.23□□□□□ -1.89
COPS3-204ENST00000462236 CDK1P06493 297 aa3.23□□□□□ -1.89
COPS3-204ENST00000462236 CTSGP08311 255 aa3.23□□□□□ -1.89
COPS3-204ENST00000462236 KRTAP1-4P0C5Y4 121 aa3.23□□□□□ -1.89
COPS3-204ENST00000462236 P0C879 139 aa3.23□□□□□ -1.89
COPS3-204ENST00000462236 ZNF705DP0CH99 300 aaPredicted RBP3.23□□□□□ -1.89
COPS3-204ENST00000462236 ZNF705BP0CI00 300 aaPredicted RBP3.23□□□□□ -1.89
COPS3-204ENST00000462236 CALB2P22676 271 aa3.23□□□□□ -1.89
COPS3-204ENST00000462236 NPY1RP25929 384 aa3.23□□□□□ -1.89
COPS3-204ENST00000462236 DEFB131AP59861 70 aa3.23□□□□□ -1.89
COPS3-204ENST00000462236 OR2B8PP59922 312 aa3.23□□□□□ -1.89
COPS3-204ENST00000462236 RPL30P62888 115 aaKnown RBP3.23□□□□□ -1.89
COPS3-204ENST00000462236 SSX1Q16384 188 aa3.23□□□□□ -1.89
COPS3-204ENST00000462236 YIF1BQ5BJH7 314 aa3.23□□□□□ -1.89
COPS3-204ENST00000462236 LCE3CQ5T5A8 94 aa3.23□□□□□ -1.89
COPS3-204ENST00000462236 OR2G6Q5TZ20 316 aa3.23□□□□□ -1.89
COPS3-204ENST00000462236 OR8G2PQ6IF36 304 aa3.23□□□□□ -1.89
COPS3-204ENST00000462236 UFSP1Q6NVU6 142 aa3.23□□□□□ -1.89
COPS3-204ENST00000462236 ZNF705AQ6ZN79 300 aaPredicted RBP3.23□□□□□ -1.89
COPS3-204ENST00000462236 Q6ZRN7 208 aaPredicted RBP3.23□□□□□ -1.89
COPS3-204ENST00000462236 H1FOOQ8IZA3 346 aaPredicted RBP3.23□□□□□ -1.89
COPS3-204ENST00000462236 VKORC1L1Q8N0U8 176 aa3.23□□□□□ -1.89
COPS3-204ENST00000462236 VSIG2Q96IQ7 327 aa3.23□□□□□ -1.89
COPS3-204ENST00000462236 OR2A7Q96R45 310 aa3.23□□□□□ -1.89
COPS3-204ENST00000462236 YTHDF1Q9BYJ9 559 aaKnown RBP3.23□□□□□ -1.89
COPS3-204ENST00000462236 LPAR5Q9H1C0 372 aa3.23□□□□□ -1.89
COPS3-204ENST00000462236 TMEM14BQ9NUH8 114 aa3.23□□□□□ -1.89
COPS3-204ENST00000462236 PLEKHJ1Q9NW61 149 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms