RNA–Protein interactions for RNA: ENST00000458277.1

HMGB4-202, Transcript of high mobility group box 4, humanhuman

TSL 3

Gene HMGB4, Length 437 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-202ENST00000458277 MYMXA0A1B0GTQ4 84 aa4.53□□□□□ -1.68
HMGB4-202ENST00000458277 A0A1B0GXF2 115 aa4.53□□□□□ -1.68
HMGB4-202ENST00000458277 ZNF840PA6NDX5 716 aa4.53□□□□□ -1.68
HMGB4-202ENST00000458277 NDUFC2-KCTD14E9PQ53 114 aa4.53□□□□□ -1.68
HMGB4-202ENST00000458277 J3QLI3 93 aa4.53□□□□□ -1.68
HMGB4-202ENST00000458277 TNRC18O15417 2968 aaPredicted RBP4.53□□□□□ -1.68
HMGB4-202ENST00000458277 FOXS1O43638 330 aa4.53□□□□□ -1.68
HMGB4-202ENST00000458277 NDUFC2O95298 119 aa4.53□□□□□ -1.68
HMGB4-202ENST00000458277 CD3EP07766 207 aa4.53□□□□□ -1.68
HMGB4-202ENST00000458277 GCHFRP30047 84 aa4.53□□□□□ -1.68
HMGB4-202ENST00000458277 RPL13AP40429 203 aaKnown RBP4.53□□□□□ -1.68
HMGB4-202ENST00000458277 PRDX1Q06830 199 aaKnown RBP4.53□□□□□ -1.68
HMGB4-202ENST00000458277 C3AR1Q16581 482 aa4.53□□□□□ -1.68
HMGB4-202ENST00000458277 LY6KQ17RY6 165 aa4.53□□□□□ -1.68
HMGB4-202ENST00000458277 TMEM196Q5HYL7 178 aa4.53□□□□□ -1.68
HMGB4-202ENST00000458277 HES3Q5TGS1 186 aa4.53□□□□□ -1.68
HMGB4-202ENST00000458277 LILRA3Q8N6C8 439 aaPredicted RBP4.53□□□□□ -1.68
HMGB4-202ENST00000458277 PRSS3P2Q8NHM4 247 aa4.53□□□□□ -1.68
HMGB4-202ENST00000458277 TIMD4Q96H15 378 aa4.53□□□□□ -1.68
HMGB4-202ENST00000458277 ZNF414Q96IQ9 312 aa4.53□□□□□ -1.68
HMGB4-202ENST00000458277 NAA38Q9BRA0 125 aaKnown RBP4.53□□□□□ -1.68
HMGB4-202ENST00000458277 IL23AQ9NPF7 189 aa4.53□□□□□ -1.68
HMGB4-202ENST00000458277 ALKBH4Q9NXW9 302 aa4.53□□□□□ -1.68
HMGB4-202ENST00000458277 C21orf62Q9NYP8 219 aa4.53□□□□□ -1.68
HMGB4-202ENST00000458277 LHFPL6Q9Y693 200 aa4.53□□□□□ -1.68
HMGB4-202ENST00000458277 CPAMD8Q8IZJ3 1885 aa4.53□□□□□ -1.68
HMGB4-202ENST00000458277 H3BSH0 61 aa4.52□□□□□ -1.69
HMGB4-202ENST00000458277 LMX1BO60663 402 aa4.52□□□□□ -1.69
HMGB4-202ENST00000458277 PGLYRP1O75594 196 aaPredicted RBP4.52□□□□□ -1.69
HMGB4-202ENST00000458277 RBP4P02753 201 aa4.52□□□□□ -1.69
HMGB4-202ENST00000458277 ARL14EPLP0DKL9 152 aa4.52□□□□□ -1.69
HMGB4-202ENST00000458277 FCGR2AP12318 317 aa4.52□□□□□ -1.69
HMGB4-202ENST00000458277 CXCL5P42830 114 aa4.52□□□□□ -1.69
HMGB4-202ENST00000458277 NMUP48645 174 aa4.52□□□□□ -1.69
HMGB4-202ENST00000458277 INSL3P51460 131 aa4.52□□□□□ -1.69
HMGB4-202ENST00000458277 PLGLB1Q02325 96 aa4.52□□□□□ -1.69
HMGB4-202ENST00000458277 IL11RAQ14626 422 aa4.52□□□□□ -1.69
HMGB4-202ENST00000458277 TWIST1Q15672 202 aa4.52□□□□□ -1.69
HMGB4-202ENST00000458277 CR1LQ2VPA4 569 aa4.52□□□□□ -1.69
HMGB4-202ENST00000458277 FHL5Q5TD97 284 aa4.52□□□□□ -1.69
HMGB4-202ENST00000458277 Q6ZSR3 168 aa4.52□□□□□ -1.69
HMGB4-202ENST00000458277 ASCL5Q7RTU5 278 aa4.52□□□□□ -1.69
HMGB4-202ENST00000458277 MARCH3Q86UD3 253 aa4.52□□□□□ -1.69
HMGB4-202ENST00000458277 DTX2Q86UW9 622 aa4.52□□□□□ -1.69
HMGB4-202ENST00000458277 APRG1Q8IVJ8 170 aa4.52□□□□□ -1.69
HMGB4-202ENST00000458277 SFTPA2Q8IWL1 248 aa4.52□□□□□ -1.69
HMGB4-202ENST00000458277 SFTPA1Q8IWL2 248 aa4.52□□□□□ -1.69
HMGB4-202ENST00000458277 AMN1Q8IY45 258 aa4.52□□□□□ -1.69
HMGB4-202ENST00000458277 ANKRD29Q8N6D5 301 aa4.52□□□□□ -1.69
HMGB4-202ENST00000458277 GJC3Q8NFK1 279 aa4.52□□□□□ -1.69
HMGB4-202ENST00000458277 GATAD1Q8WUU5 269 aa4.52□□□□□ -1.69
HMGB4-202ENST00000458277 BAALCQ8WXS3 180 aa4.52□□□□□ -1.69
HMGB4-202ENST00000458277 IFI27L1Q96BM0 104 aa4.52□□□□□ -1.69
HMGB4-202ENST00000458277 PLEKHB2Q96CS7 222 aa4.52□□□□□ -1.69
HMGB4-202ENST00000458277 HIST1H4GQ99525 98 aa4.52□□□□□ -1.69
HMGB4-202ENST00000458277 MCRIP2Q9BUT9 160 aaKnown RBP4.52□□□□□ -1.69
HMGB4-202ENST00000458277 C1orf43Q9BWL3 253 aa4.52□□□□□ -1.69
HMGB4-202ENST00000458277 PLEKHA3Q9HB20 300 aa4.52□□□□□ -1.69
HMGB4-202ENST00000458277 HEYLQ9NQ87 328 aaPredicted RBP4.52□□□□□ -1.69
HMGB4-202ENST00000458277 CACNG5Q9UF02 275 aa4.52□□□□□ -1.69
HMGB4-202ENST00000458277 LAMTOR3Q9UHA4 124 aa4.52□□□□□ -1.69
HMGB4-202ENST00000458277 TAC3Q9UHF0 121 aa4.52□□□□□ -1.69
HMGB4-202ENST00000458277 ZNF256Q9Y2P7 627 aaPredicted RBP4.52□□□□□ -1.69
HMGB4-202ENST00000458277 BRCA2P51587 3418 aa4.52□□□□□ -1.69
HMGB4-202ENST00000458277 MBD3L4A6NDZ8 208 aaPredicted RBP4.51□□□□□ -1.69
HMGB4-202ENST00000458277 MBD3L3A6NE82 208 aaPredicted RBP4.51□□□□□ -1.69
HMGB4-202ENST00000458277 FRG2CA6NGY1 282 aa4.51□□□□□ -1.69
HMGB4-202ENST00000458277 MBD3L5A6NJ08 208 aaPredicted RBP4.51□□□□□ -1.69
HMGB4-202ENST00000458277 NCBP2LA6PVI3 153 aaKnown RBP4.51□□□□□ -1.69
HMGB4-202ENST00000458277 C15orf62A8K5M9 175 aa4.51□□□□□ -1.69
HMGB4-202ENST00000458277 H3BP45 60 aa4.51□□□□□ -1.69
HMGB4-202ENST00000458277 ATOX1O00244 68 aa4.51□□□□□ -1.69
HMGB4-202ENST00000458277 MYF5P13349 255 aa4.51□□□□□ -1.69
HMGB4-202ENST00000458277 COX7CP15954 63 aa4.51□□□□□ -1.69
HMGB4-202ENST00000458277 HLA-DMBP28068 263 aa4.51□□□□□ -1.69
HMGB4-202ENST00000458277 FXYD2P54710 66 aa4.51□□□□□ -1.69
HMGB4-202ENST00000458277 PPP1CAP62136 330 aa4.51□□□□□ -1.69
HMGB4-202ENST00000458277 KLRB1Q12918 225 aa4.51□□□□□ -1.69
HMGB4-202ENST00000458277 RIGQ13278 110 aa4.51□□□□□ -1.69
HMGB4-202ENST00000458277 TMEM170BQ5T4T1 132 aa4.51□□□□□ -1.69
HMGB4-202ENST00000458277 GOLT1AQ6ZVE7 132 aa4.51□□□□□ -1.69
HMGB4-202ENST00000458277 LINC00596Q86U02 117 aa4.51□□□□□ -1.69
HMGB4-202ENST00000458277 NFE4Q86UQ8 179 aa4.51□□□□□ -1.69
HMGB4-202ENST00000458277 SLC22A18ASQ8N1D0 253 aa4.51□□□□□ -1.69
HMGB4-202ENST00000458277 KLHDC9Q8NEP7 349 aa4.51□□□□□ -1.69
HMGB4-202ENST00000458277 NT5CQ8TCD5 201 aa4.51□□□□□ -1.69
HMGB4-202ENST00000458277 ZC2HC1AQ96GY0 325 aa4.51□□□□□ -1.69
HMGB4-202ENST00000458277 AJUBAQ96IF1 538 aa4.51□□□□□ -1.69
HMGB4-202ENST00000458277 SMIM14Q96QK8 99 aa4.51□□□□□ -1.69
HMGB4-202ENST00000458277 FAM60AQ9NP50 221 aa4.51□□□□□ -1.69
HMGB4-202ENST00000458277 DKK4Q9UBT3 224 aa4.51□□□□□ -1.69
HMGB4-202ENST00000458277 PLXNA4Q9HCM2 1894 aa4.51□□□□□ -1.69
HMGB4-202ENST00000458277 SCN5AQ14524 2016 aa4.51□□□□□ -1.69
HMGB4-202ENST00000458277 IGKV1D-42A0A075B6H8 117 aa4.5□□□□□ -1.69
HMGB4-202ENST00000458277 TRBV25-1A0A075B6N4 114 aa4.5□□□□□ -1.69
HMGB4-202ENST00000458277 IGKV1D-8A0A087WSZ0 117 aa4.5□□□□□ -1.69
HMGB4-202ENST00000458277 LOC102723996A0A087X1L8 192 aa4.5□□□□□ -1.69
HMGB4-202ENST00000458277 TRAV4A0A0B4J268 109 aa4.5□□□□□ -1.69
HMGB4-202ENST00000458277 A0A1W2PR77 199 aa4.5□□□□□ -1.69
HMGB4-202ENST00000458277 NPIPB11E5RHQ5 1161 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms