RNA–Protein interactions for RNA: ENST00000458034.1

RFX3-211, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-211ENST00000458034 TMEM14CQ9P0S9 112 aa8.75□□□□□ -1.01
RFX3-211ENST00000458034 KLF12Q9Y4X4 402 aa8.75□□□□□ -1.01
RFX3-211ENST00000458034 EP300Q09472 2414 aaPredicted RBP8.74□□□□□ -1.01
RFX3-211ENST00000458034 FAM90A27PA6NNH2 459 aa8.74□□□□□ -1.01
RFX3-211ENST00000458034 A8MWL6 223 aa8.74□□□□□ -1.01
RFX3-211ENST00000458034 TEX22C9J3V5 150 aa8.74□□□□□ -1.01
RFX3-211ENST00000458034 M0QZK8 103 aa8.74□□□□□ -1.01
RFX3-211ENST00000458034 M0R143 59 aa8.74□□□□□ -1.01
RFX3-211ENST00000458034 BMPR1BO00238 502 aa8.74□□□□□ -1.01
RFX3-211ENST00000458034 IGHV3-48P01763 117 aa8.74□□□□□ -1.01
RFX3-211ENST00000458034 GPX1P07203 203 aa8.74□□□□□ -1.01
RFX3-211ENST00000458034 GP9P14770 177 aa8.74□□□□□ -1.01
RFX3-211ENST00000458034 CEACAM3P40198 252 aa8.74□□□□□ -1.01
RFX3-211ENST00000458034 AMTP48728 403 aa8.74□□□□□ -1.01
RFX3-211ENST00000458034 MFAP2P55001 183 aa8.74□□□□□ -1.01
RFX3-211ENST00000458034 UCNP55089 124 aa8.74□□□□□ -1.01
RFX3-211ENST00000458034 TPTE2P1Q5T6R2 138 aa8.74□□□□□ -1.01
RFX3-211ENST00000458034 ZNF841Q6ZN19 808 aa8.74□□□□□ -1.01
RFX3-211ENST00000458034 ZNF600Q6ZNG1 722 aa8.74□□□□□ -1.01
RFX3-211ENST00000458034 NHLRC2Q8NBF2 726 aa8.74□□□□□ -1.01
RFX3-211ENST00000458034 OR4B1Q8NGF8 309 aa8.74□□□□□ -1.01
RFX3-211ENST00000458034 SRSF12Q8WXF0 261 aaKnown RBP8.74□□□□□ -1.01
RFX3-211ENST00000458034 DAZAP1Q96EP5 407 aaKnown RBP8.74□□□□□ -1.01
RFX3-211ENST00000458034 RITA1Q96K30 269 aa8.74□□□□□ -1.01
RFX3-211ENST00000458034 RASL11BQ9BPW5 248 aa8.74□□□□□ -1.01
RFX3-211ENST00000458034 RPP21Q9H633 154 aaKnown RBP8.74□□□□□ -1.01
RFX3-211ENST00000458034 ONECUT1Q9UBC0 465 aa8.74□□□□□ -1.01
RFX3-211ENST00000458034 TRAV34A0A0B4J273 112 aa8.73□□□□□ -1.01
RFX3-211ENST00000458034 TRBV6-1A0A0K0K1D8 114 aa8.73□□□□□ -1.01
RFX3-211ENST00000458034 A0A1B0GV90 55 aa8.73□□□□□ -1.01
RFX3-211ENST00000458034 ZNF324O75467 553 aaPredicted RBP8.73□□□□□ -1.01
RFX3-211ENST00000458034 OR2J3O76001 311 aa8.73□□□□□ -1.01
RFX3-211ENST00000458034 PLAUP00749 431 aa8.73□□□□□ -1.01
RFX3-211ENST00000458034 COL8A2P25067 703 aa8.73□□□□□ -1.01
RFX3-211ENST00000458034 CNTFRP26992 372 aa8.73□□□□□ -1.01
RFX3-211ENST00000458034 LYZP61626 148 aa8.73□□□□□ -1.01
RFX3-211ENST00000458034 GNG5P63218 68 aa8.73□□□□□ -1.01
RFX3-211ENST00000458034 SLC35B1P78383 322 aa8.73□□□□□ -1.01
RFX3-211ENST00000458034 KLF5Q13887 457 aaPredicted RBP8.73□□□□□ -1.01
RFX3-211ENST00000458034 PRR27Q6MZM9 219 aa8.73□□□□□ -1.01
RFX3-211ENST00000458034 LY6G5BQ8NDX9 201 aa8.73□□□□□ -1.01
RFX3-211ENST00000458034 NUP35Q8NFH5 326 aa8.73□□□□□ -1.01
RFX3-211ENST00000458034 BORCS7Q96B45 105 aa8.73□□□□□ -1.01
RFX3-211ENST00000458034 LINC00479Q96M42 142 aa8.73□□□□□ -1.01
RFX3-211ENST00000458034 SCNM1Q9BWG6 230 aa8.73□□□□□ -1.01
RFX3-211ENST00000458034 Q9H3A6 140 aa8.73□□□□□ -1.01
RFX3-211ENST00000458034 FBXL15Q9H469 300 aa8.73□□□□□ -1.01
RFX3-211ENST00000458034 RPH3ALQ9UNE2 315 aa8.73□□□□□ -1.01
RFX3-211ENST00000458034 TBL2Q9Y4P3 447 aaKnown RBP8.73□□□□□ -1.01
RFX3-211ENST00000458034 COL6A3P12111 3177 aa8.73□□□□□ -1.01
RFX3-211ENST00000458034 MALRD1Q5VYJ5 2156 aa8.72□□□□□ -1.01
RFX3-211ENST00000458034 A0A1W2PS18 150 aa8.72□□□□□ -1.01
RFX3-211ENST00000458034 LY6LH3BQJ8 138 aa8.72□□□□□ -1.01
RFX3-211ENST00000458034 M0R1W7 72 aa8.72□□□□□ -1.01
RFX3-211ENST00000458034 SCGB2A1O75556 95 aa8.72□□□□□ -1.01
RFX3-211ENST00000458034 CNIH1O95406 144 aa8.72□□□□□ -1.01
RFX3-211ENST00000458034 P01737 135 aa8.72□□□□□ -1.01
RFX3-211ENST00000458034 TCRAP04437 139 aa8.72□□□□□ -1.01
RFX3-211ENST00000458034 IGLC1P0CG04 106 aa8.72□□□□□ -1.01
RFX3-211ENST00000458034 RAB4AP20338 218 aa8.72□□□□□ -1.01
RFX3-211ENST00000458034 PMCHP20382 165 aa8.72□□□□□ -1.01
RFX3-211ENST00000458034 HTR1DP28221 377 aa8.72□□□□□ -1.01
RFX3-211ENST00000458034 KRTDAPP60985 99 aa8.72□□□□□ -1.01
RFX3-211ENST00000458034 KIAA1644Q3SXP7 199 aa8.72□□□□□ -1.01
RFX3-211ENST00000458034 CYB5R2Q6BCY4 276 aa8.72□□□□□ -1.01
RFX3-211ENST00000458034 LINC01560Q8TB33 94 aa8.72□□□□□ -1.01
RFX3-211ENST00000458034 VN1R17PQ8TDU5 208 aa8.72□□□□□ -1.01
RFX3-211ENST00000458034 NEU4Q8WWR8 484 aaPredicted RBP8.72□□□□□ -1.01
RFX3-211ENST00000458034 SSBP3Q9BWW4 388 aaPredicted RBP8.72□□□□□ -1.01
RFX3-211ENST00000458034 GFRA4Q9GZZ7 299 aa8.72□□□□□ -1.01
RFX3-211ENST00000458034 C7orf69Q9H7B7 122 aa8.72□□□□□ -1.01
RFX3-211ENST00000458034 NRN1Q9NPD7 142 aa8.72□□□□□ -1.01
RFX3-211ENST00000458034 DPM3Q9P2X0 92 aa8.72□□□□□ -1.01
RFX3-211ENST00000458034 TRAV30A0A087WSZ9 112 aa8.71□□□□□ -1.02
RFX3-211ENST00000458034 FAM231BA6NCW3 169 aa8.71□□□□□ -1.02
RFX3-211ENST00000458034 DIRC3C9JPN6 131 aa8.71□□□□□ -1.02
RFX3-211ENST00000458034 F2Z2F3 143 aa8.71□□□□□ -1.02
RFX3-211ENST00000458034 I3L2K1 104 aa8.71□□□□□ -1.02
RFX3-211ENST00000458034 K7EQM0 130 aa8.71□□□□□ -1.02
RFX3-211ENST00000458034 NBR2O15453 112 aa8.71□□□□□ -1.02
RFX3-211ENST00000458034 CA1P00915 261 aaPredicted RBP8.71□□□□□ -1.02
RFX3-211ENST00000458034 LTAP01374 205 aa8.71□□□□□ -1.02
RFX3-211ENST00000458034 SNRPCP09234 159 aaKnown RBP8.71□□□□□ -1.02
RFX3-211ENST00000458034 FRMD6-AS1P0C7T7 363 aa8.71□□□□□ -1.02
RFX3-211ENST00000458034 HBBP68871 147 aa8.71□□□□□ -1.02
RFX3-211ENST00000458034 MMDQ15546 238 aa8.71□□□□□ -1.02
RFX3-211ENST00000458034 ZNF705AQ6ZN79 300 aaPredicted RBP8.71□□□□□ -1.02
RFX3-211ENST00000458034 OR4F17Q8NGA8 305 aa8.71□□□□□ -1.02
RFX3-211ENST00000458034 OR11H6Q8NGC7 330 aa8.71□□□□□ -1.02
RFX3-211ENST00000458034 NEU1Q99519 415 aa8.71□□□□□ -1.02
RFX3-211ENST00000458034 MIEN1Q9BRT3 115 aa8.71□□□□□ -1.02
RFX3-211ENST00000458034 FAM103A1Q9BTL3 118 aaKnown RBP8.71□□□□□ -1.02
RFX3-211ENST00000458034 MLST8Q9BVC4 326 aa8.71□□□□□ -1.02
RFX3-211ENST00000458034 SLC25A39Q9BZJ4 359 aaPredicted RBP8.71□□□□□ -1.02
RFX3-211ENST00000458034 WNT10AQ9GZT5 417 aa8.71□□□□□ -1.02
RFX3-211ENST00000458034 FBXL7Q9UJT9 491 aa8.71□□□□□ -1.02
RFX3-211ENST00000458034 NAV3Q8IVL0 2385 aa8.7□□□□□ -1.02
RFX3-211ENST00000458034 IGHV3-21A0A0B4J1V1 117 aa8.7□□□□□ -1.02
RFX3-211ENST00000458034 A0A1B0GXF2 115 aa8.7□□□□□ -1.02
RFX3-211ENST00000458034 HIGD1CA8MV81 97 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms