RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 GOSR1O95249 250 aa8.31□□□□□ -1.08
CLIP4-208ENST00000456385 IGKV3-15P01624 115 aa8.31□□□□□ -1.08
CLIP4-208ENST00000456385 CECR9P0C854 216 aa8.31□□□□□ -1.08
CLIP4-208ENST00000456385 ORM2P19652 201 aa8.31□□□□□ -1.08
CLIP4-208ENST00000456385 PAX2Q02962 417 aa8.31□□□□□ -1.08
CLIP4-208ENST00000456385 INO80CQ6PI98 192 aaPredicted RBP8.31□□□□□ -1.08
CLIP4-208ENST00000456385 BHLHA15Q7RTS1 189 aaPredicted RBP8.31□□□□□ -1.08
CLIP4-208ENST00000456385 PDPNQ86YL7 162 aa8.31□□□□□ -1.08
CLIP4-208ENST00000456385 C5orf17Q8NAS9 161 aa8.31□□□□□ -1.08
CLIP4-208ENST00000456385 RABAC1Q9UI14 185 aa8.31□□□□□ -1.08
CLIP4-208ENST00000456385 HSPB8Q9UJY1 196 aa8.31□□□□□ -1.08
CLIP4-208ENST00000456385 TRAV8-1A0A0A6YYK1 113 aa8.3□□□□□ -1.08
CLIP4-208ENST00000456385 KBTBD11-OT1A0A1B0GTJ5 212 aa8.3□□□□□ -1.08
CLIP4-208ENST00000456385 C19orf71A6NCJ1 209 aa8.3□□□□□ -1.08
CLIP4-208ENST00000456385 FGF6P10767 208 aa8.3□□□□□ -1.08
CLIP4-208ENST00000456385 GUSBP1Q15486 140 aa8.3□□□□□ -1.08
CLIP4-208ENST00000456385 MSMPQ1L6U9 139 aa8.3□□□□□ -1.08
CLIP4-208ENST00000456385 RBPMS2Q6ZRY4 209 aaKnown RBP8.3□□□□□ -1.08
CLIP4-208ENST00000456385 RAB37Q96AX2 223 aa8.3□□□□□ -1.08
CLIP4-208ENST00000456385 KLF12Q9Y4X4 402 aa8.3□□□□□ -1.08
CLIP4-208ENST00000456385 C9orf118A6NHY6 69 aa8.3□□□□□ -1.08
CLIP4-208ENST00000456385 APOHP02749 345 aaPredicted RBP8.3□□□□□ -1.08
CLIP4-208ENST00000456385 FAM106CPP0CH98 169 aa8.3□□□□□ -1.08
CLIP4-208ENST00000456385 ACP1P24666 158 aa8.3□□□□□ -1.08
CLIP4-208ENST00000456385 SEC11AP67812 179 aa8.3□□□□□ -1.08
CLIP4-208ENST00000456385 FAM106AQ4KMX7 169 aa8.3□□□□□ -1.08
CLIP4-208ENST00000456385 C10orf55Q5SWW7 151 aa8.3□□□□□ -1.08
CLIP4-208ENST00000456385 GTF2H5Q6ZYL4 71 aa8.3□□□□□ -1.08
CLIP4-208ENST00000456385 CNEP1R1Q8N9A8 125 aa8.3□□□□□ -1.08
CLIP4-208ENST00000456385 PPP1R35Q8TAP8 253 aa8.3□□□□□ -1.08
CLIP4-208ENST00000456385 ZNF747Q9BV97 191 aa8.3□□□□□ -1.08
CLIP4-208ENST00000456385 KALRNO60229 2985 aa8.29□□□□□ -1.08
CLIP4-208ENST00000456385 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.29□□□□□ -1.08
CLIP4-208ENST00000456385 DLL1O00548 723 aa8.29□□□□□ -1.08
CLIP4-208ENST00000456385 WT1-ASQ06250 92 aa8.29□□□□□ -1.08
CLIP4-208ENST00000456385 MOGAT3Q86VF5 341 aa8.29□□□□□ -1.08
CLIP4-208ENST00000456385 CIARTQ8N365 385 aaPredicted RBP8.29□□□□□ -1.08
CLIP4-208ENST00000456385 PIP4P2Q8N4L2 257 aa8.29□□□□□ -1.08
CLIP4-208ENST00000456385 RBMXL3Q8N7X1 1067 aaKnown RBP8.29□□□□□ -1.08
CLIP4-208ENST00000456385 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.29□□□□□ -1.08
CLIP4-208ENST00000456385 OR1L4Q8NGR5 311 aa8.29□□□□□ -1.08
CLIP4-208ENST00000456385 OR1N2Q8NGR9 330 aa8.29□□□□□ -1.08
CLIP4-208ENST00000456385 CACNG8Q8WXS5 425 aa8.29□□□□□ -1.08
CLIP4-208ENST00000456385 DAZAP1Q96EP5 407 aaKnown RBP8.29□□□□□ -1.08
CLIP4-208ENST00000456385 AP1S3Q96PC3 154 aa8.29□□□□□ -1.08
CLIP4-208ENST00000456385 ASCL2Q99929 193 aa8.29□□□□□ -1.08
CLIP4-208ENST00000456385 NDUFA4L2Q9NRX3 87 aa8.29□□□□□ -1.08
CLIP4-208ENST00000456385 CHTOPQ9Y3Y2 248 aaKnown RBP8.29□□□□□ -1.08
CLIP4-208ENST00000456385 CADP27708 2225 aa8.29□□□□□ -1.08
CLIP4-208ENST00000456385 TRGV5A0A0B4J1U4 118 aa8.29□□□□□ -1.08
CLIP4-208ENST00000456385 TCRBV4S1A1TA0A5B7 111 aa8.29□□□□□ -1.08
CLIP4-208ENST00000456385 K7EP34 96 aa8.29□□□□□ -1.08
CLIP4-208ENST00000456385 CIDEAO60543 219 aa8.29□□□□□ -1.08
CLIP4-208ENST00000456385 LTAP01374 205 aa8.29□□□□□ -1.08
CLIP4-208ENST00000456385 KIR3DS1Q14943 382 aa8.29□□□□□ -1.08
CLIP4-208ENST00000456385 C1orf185Q5T7R7 199 aa8.29□□□□□ -1.08
CLIP4-208ENST00000456385 ADTRPQ96IZ2 230 aa8.29□□□□□ -1.08
CLIP4-208ENST00000456385 AP5S1Q9NUS5 200 aa8.29□□□□□ -1.08
CLIP4-208ENST00000456385 ICE1Q9Y2F5 2266 aa8.29□□□□□ -1.08
CLIP4-208ENST00000456385 SVILO95425 2214 aa8.28□□□□□ -1.08
CLIP4-208ENST00000456385 DSCAMO60469 2012 aa8.28□□□□□ -1.08
CLIP4-208ENST00000456385 A0A0G2JLM5 398 aa8.28□□□□□ -1.08
CLIP4-208ENST00000456385 H3BRM9 83 aa8.28□□□□□ -1.08
CLIP4-208ENST00000456385 ERHP84090 104 aaKnown RBP8.28□□□□□ -1.08
CLIP4-208ENST00000456385 LOXL1Q08397 574 aaPredicted RBP8.28□□□□□ -1.08
CLIP4-208ENST00000456385 PMS2CLQ68D20 193 aa8.28□□□□□ -1.08
CLIP4-208ENST00000456385 PRSS57Q6UWY2 283 aa8.28□□□□□ -1.08
CLIP4-208ENST00000456385 Q6ZT83 130 aa8.28□□□□□ -1.08
CLIP4-208ENST00000456385 DEFB108BQ8NET1 73 aa8.28□□□□□ -1.08
CLIP4-208ENST00000456385 OR10AG1Q8NH19 301 aa8.28□□□□□ -1.08
CLIP4-208ENST00000456385 OR4A5Q8NH83 315 aa8.28□□□□□ -1.08
CLIP4-208ENST00000456385 SOX21Q9Y651 276 aaPredicted RBP8.28□□□□□ -1.08
CLIP4-208ENST00000456385 HEATR1Q9H583 2144 aaKnown RBP8.28□□□□□ -1.08
CLIP4-208ENST00000456385 KLRC4-KLRK1H3BQV0 150 aa8.28□□□□□ -1.08
CLIP4-208ENST00000456385 OVOL3O00110 214 aa8.28□□□□□ -1.08
CLIP4-208ENST00000456385 FAM87AP0C7U9 286 aa8.28□□□□□ -1.08
CLIP4-208ENST00000456385 COL8A1P27658 744 aa8.28□□□□□ -1.08
CLIP4-208ENST00000456385 HOXC12P31275 282 aa8.28□□□□□ -1.08
CLIP4-208ENST00000456385 FXYD7P58549 80 aa8.28□□□□□ -1.08
CLIP4-208ENST00000456385 CT83Q5H943 113 aa8.28□□□□□ -1.08
CLIP4-208ENST00000456385 NEGR1Q7Z3B1 354 aa8.28□□□□□ -1.08
CLIP4-208ENST00000456385 OR8A1Q8NGG7 326 aa8.28□□□□□ -1.08
CLIP4-208ENST00000456385 OR2K2Q8NGT1 345 aa8.28□□□□□ -1.08
CLIP4-208ENST00000456385 MAFAQ8NHW3 353 aaPredicted RBP8.28□□□□□ -1.08
CLIP4-208ENST00000456385 THYN1Q9P016 225 aa8.28□□□□□ -1.08
CLIP4-208ENST00000456385 CGB1A6NKQ9 187 aa8.27□□□□□ -1.09
CLIP4-208ENST00000456385 TCRAP04437 139 aa8.27□□□□□ -1.09
CLIP4-208ENST00000456385 ARMS2P0C7Q2 107 aa8.27□□□□□ -1.09
CLIP4-208ENST00000456385 FLYWCH2Q96CP2 140 aaKnown RBP8.27□□□□□ -1.09
CLIP4-208ENST00000456385 HARBI1Q96MB7 349 aa8.27□□□□□ -1.09
CLIP4-208ENST00000456385 GFRA4Q9GZZ7 299 aa8.27□□□□□ -1.09
CLIP4-208ENST00000456385 SSUH2Q9Y2M2 353 aa8.27□□□□□ -1.09
CLIP4-208ENST00000456385 PLXNB1O43157 2135 aa8.27□□□□□ -1.09
CLIP4-208ENST00000456385 A0A096LNJ9 63 aa8.26□□□□□ -1.09
CLIP4-208ENST00000456385 A6NDN8 102 aa8.26□□□□□ -1.09
CLIP4-208ENST00000456385 C9orf172C9J069 976 aa8.26□□□□□ -1.09
CLIP4-208ENST00000456385 C22orf46C9J442 243 aa8.26□□□□□ -1.09
CLIP4-208ENST00000456385 HAX1O00165 279 aa8.26□□□□□ -1.09
CLIP4-208ENST00000456385 SPRY3O43610 288 aa8.26□□□□□ -1.09
CLIP4-208ENST00000456385 IFI27P40305 119 aaPredicted RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms