RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 NAA60Q9H7X0 242 aa7.83□□□□□ -1.16
USP1-204ENST00000452143 EXTL2Q9UBQ6 330 aa7.83□□□□□ -1.16
USP1-204ENST00000452143 CACNG5Q9UF02 275 aa7.83□□□□□ -1.16
USP1-204ENST00000452143 TEX13DA0A0J9YY54 714 aaPredicted RBP7.82□□□□□ -1.16
USP1-204ENST00000452143 TEX48A0A1B0GUV7 120 aa7.82□□□□□ -1.16
USP1-204ENST00000452143 A0A1B0GVY2 172 aa7.82□□□□□ -1.16
USP1-204ENST00000452143 ZNF705FA8MVS1 300 aaPredicted RBP7.82□□□□□ -1.16
USP1-204ENST00000452143 H3BMM0 161 aa7.82□□□□□ -1.16
USP1-204ENST00000452143 GABARAPH6UMI1 98 aa7.82□□□□□ -1.16
USP1-204ENST00000452143 GABARAPO95166 117 aa7.82□□□□□ -1.16
USP1-204ENST00000452143 ZNF705DP0CH99 300 aaPredicted RBP7.82□□□□□ -1.16
USP1-204ENST00000452143 ZNF705BP0CI00 300 aaPredicted RBP7.82□□□□□ -1.16
USP1-204ENST00000452143 MED14OSP0DP75 135 aa7.82□□□□□ -1.16
USP1-204ENST00000452143 HLA-DRB4P13762 266 aa7.82□□□□□ -1.16
USP1-204ENST00000452143 ZNF182P17025 639 aaPredicted RBP7.82□□□□□ -1.16
USP1-204ENST00000452143 NKX2-1P43699 371 aaPredicted RBP7.82□□□□□ -1.16
USP1-204ENST00000452143 MRPS10P82664 201 aaKnown RBP7.82□□□□□ -1.16
USP1-204ENST00000452143 GPR107Q5VW38 600 aa7.82□□□□□ -1.16
USP1-204ENST00000452143 ZNF705AQ6ZN79 300 aaPredicted RBP7.82□□□□□ -1.16
USP1-204ENST00000452143 LHFPL5Q8TAF8 219 aa7.82□□□□□ -1.16
USP1-204ENST00000452143 FAM210BQ96KR6 192 aa7.82□□□□□ -1.16
USP1-204ENST00000452143 XCL2Q9UBD3 114 aa7.82□□□□□ -1.16
USP1-204ENST00000452143 PFDN2Q9UHV9 154 aa7.82□□□□□ -1.16
USP1-204ENST00000452143 HLA-DRB4X5D2U9 266 aa7.82□□□□□ -1.16
USP1-204ENST00000452143 SMIM9A6NGZ8 99 aa7.81□□□□□ -1.16
USP1-204ENST00000452143 CEBPZOSA8MTT3 80 aa7.81□□□□□ -1.16
USP1-204ENST00000452143 SPART-AS1P0CW21 52 aa7.81□□□□□ -1.16
USP1-204ENST00000452143 RD3LP0DJH9 198 aa7.81□□□□□ -1.16
USP1-204ENST00000452143 NMSQ5H8A3 153 aa7.81□□□□□ -1.16
USP1-204ENST00000452143 TMEM268Q5VZI3 342 aa7.81□□□□□ -1.16
USP1-204ENST00000452143 OR8G2PQ6IF36 304 aa7.81□□□□□ -1.16
USP1-204ENST00000452143 SELENOHQ8IZQ5 122 aaKnown RBP7.81□□□□□ -1.16
USP1-204ENST00000452143 TMEM170AQ8WVE7 144 aa7.81□□□□□ -1.16
USP1-204ENST00000452143 IL22RA2Q969J5 263 aa7.81□□□□□ -1.16
USP1-204ENST00000452143 RNF125Q96EQ8 232 aa7.81□□□□□ -1.16
USP1-204ENST00000452143 TMEM56-RWDD3S4R434 201 aa7.81□□□□□ -1.16
USP1-204ENST00000452143 MUC4Q99102 2169 aa7.8□□□□□ -1.16
USP1-204ENST00000452143 DYNC1H1Q14204 4646 aaKnown RBP7.8□□□□□ -1.16
USP1-204ENST00000452143 PRSS29PA6NIE9 313 aa7.8□□□□□ -1.16
USP1-204ENST00000452143 CRYM-AS1A6NIL9 109 aa7.8□□□□□ -1.16
USP1-204ENST00000452143 DISC1C4P0D8 188 aa7.8□□□□□ -1.16
USP1-204ENST00000452143 SULT1A3P0DMM9 295 aa7.8□□□□□ -1.16
USP1-204ENST00000452143 SULT1A4P0DMN0 295 aa7.8□□□□□ -1.16
USP1-204ENST00000452143 PSG1P11464 419 aa7.8□□□□□ -1.16
USP1-204ENST00000452143 CTF1Q16619 201 aa7.8□□□□□ -1.16
USP1-204ENST00000452143 LGALS9BQ3B8N2 356 aa7.8□□□□□ -1.16
USP1-204ENST00000452143 ZNF767PQ75MW2 155 aa7.8□□□□□ -1.16
USP1-204ENST00000452143 OR51G1Q8NGK1 321 aa7.8□□□□□ -1.16
USP1-204ENST00000452143 NPIPB3Q92617 1050 aa7.8□□□□□ -1.16
USP1-204ENST00000452143 GPR146Q96CH1 333 aa7.8□□□□□ -1.16
USP1-204ENST00000452143 ACY3Q96HD9 319 aa7.8□□□□□ -1.16
USP1-204ENST00000452143 CLUHP3Q96NS8 147 aa7.8□□□□□ -1.16
USP1-204ENST00000452143 RTBDNQ9BSG5 229 aaPredicted RBP7.8□□□□□ -1.16
USP1-204ENST00000452143 U3KQ87 197 aa7.8□□□□□ -1.16
USP1-204ENST00000452143 RTL8CO15255 209 aa7.79□□□□□ -1.16
USP1-204ENST00000452143 NXPH3O95157 252 aa7.79□□□□□ -1.16
USP1-204ENST00000452143 PSMB3P49720 205 aa7.79□□□□□ -1.16
USP1-204ENST00000452143 ATP5IP56385 69 aaPredicted RBP7.79□□□□□ -1.16
USP1-204ENST00000452143 SAMD13Q5VXD3 122 aa7.79□□□□□ -1.16
USP1-204ENST00000452143 SPATA31B1PQ5VZV4 182 aa7.79□□□□□ -1.16
USP1-204ENST00000452143 FAAP20Q6NZ36 180 aa7.79□□□□□ -1.16
USP1-204ENST00000452143 FOXI2Q6ZQN5 318 aa7.79□□□□□ -1.16
USP1-204ENST00000452143 SMIM4Q8WVI0 70 aa7.79□□□□□ -1.16
USP1-204ENST00000452143 PRRT1Q99946 306 aa7.79□□□□□ -1.16
USP1-204ENST00000452143 SAV1Q9H4B6 383 aaPredicted RBP7.79□□□□□ -1.16
USP1-204ENST00000452143 HSPB7Q9UBY9 170 aa7.79□□□□□ -1.16
USP1-204ENST00000452143 RFNGQ9Y644 331 aa7.79□□□□□ -1.16
USP1-204ENST00000452143 ABCA13Q86UQ4 5058 aa7.78□□□□□ -1.16
USP1-204ENST00000452143 IFNA10P01566 189 aa7.78□□□□□ -1.16
USP1-204ENST00000452143 IFNA21P01568 189 aa7.78□□□□□ -1.16
USP1-204ENST00000452143 FABP1P07148 127 aa7.78□□□□□ -1.16
USP1-204ENST00000452143 AKAIN1P0CW23 69 aa7.78□□□□□ -1.16
USP1-204ENST00000452143 ID1P41134 155 aa7.78□□□□□ -1.16
USP1-204ENST00000452143 SUPT4H1P63272 117 aaKnown RBP7.78□□□□□ -1.16
USP1-204ENST00000452143 C1orf194Q5T5A4 169 aa7.78□□□□□ -1.16
USP1-204ENST00000452143 LGI3Q8N145 548 aa7.78□□□□□ -1.16
USP1-204ENST00000452143 ZNF709Q8N972 641 aa7.78□□□□□ -1.16
USP1-204ENST00000452143 OR4C16Q8NGL9 310 aa7.78□□□□□ -1.16
USP1-204ENST00000452143 COQ8AQ8NI60 647 aa7.78□□□□□ -1.16
USP1-204ENST00000452143 DTD1Q8TEA8 209 aa7.78□□□□□ -1.16
USP1-204ENST00000452143 SCRT1Q9BWW7 348 aa7.78□□□□□ -1.16
USP1-204ENST00000452143 KRTAP9-9Q9BYP9 154 aa7.78□□□□□ -1.16
USP1-204ENST00000452143 KRTAP9-4Q9BYQ2 154 aa7.78□□□□□ -1.16
USP1-204ENST00000452143 RABL2AQ9UBK7 228 aaPredicted RBP7.78□□□□□ -1.16
USP1-204ENST00000452143 RABL2BQ9UNT1 228 aa7.78□□□□□ -1.16
USP1-204ENST00000452143 GPR132Q9UNW8 380 aa7.78□□□□□ -1.16
USP1-204ENST00000452143 A0A0B4J2A0 478 aa7.77□□□□□ -1.17
USP1-204ENST00000452143 PIGBOS1A0A0B4J2F0 54 aa7.77□□□□□ -1.17
USP1-204ENST00000452143 ZFP92A6NM28 416 aa7.77□□□□□ -1.17
USP1-204ENST00000452143 SOCS3O14543 225 aa7.77□□□□□ -1.17
USP1-204ENST00000452143 RGS5O15539 181 aa7.77□□□□□ -1.17
USP1-204ENST00000452143 CCR6P51684 374 aa7.77□□□□□ -1.17
USP1-204ENST00000452143 PAX9P55771 341 aa7.77□□□□□ -1.17
USP1-204ENST00000452143 KLF9Q13886 244 aaPredicted RBP7.77□□□□□ -1.17
USP1-204ENST00000452143 SMCO1Q147U7 214 aa7.77□□□□□ -1.17
USP1-204ENST00000452143 OXA1LQ15070 435 aa7.77□□□□□ -1.17
USP1-204ENST00000452143 ZNF79Q15937 498 aa7.77□□□□□ -1.17
USP1-204ENST00000452143 GDF5OSQ5U4N7 250 aa7.77□□□□□ -1.17
USP1-204ENST00000452143 UBE2DNLQ8IWF7 75 aa7.77□□□□□ -1.17
USP1-204ENST00000452143 NIPSNAP3BQ9BS92 247 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms