RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 ATP5SQ99766 215 aa13.06□□□□□ -0.32
PRPF40A-204ENST00000450303 HRH4Q9H3N8 390 aa13.06□□□□□ -0.32
PRPF40A-204ENST00000450303 WFDC1Q9HC57 220 aa13.06□□□□□ -0.32
PRPF40A-204ENST00000450303 TREM1Q9NP99 234 aa13.06□□□□□ -0.32
PRPF40A-204ENST00000450303 MT-CO2P00403 227 aa13.05□□□□□ -0.32
PRPF40A-204ENST00000450303 GPX4P36969 197 aaPredicted RBP13.05□□□□□ -0.32
PRPF40A-204ENST00000450303 MFAP2P55001 183 aa13.05□□□□□ -0.32
PRPF40A-204ENST00000450303 CLINT1Q14677 625 aa13.05□□□□□ -0.32
PRPF40A-204ENST00000450303 FAM209BQ5JX69 171 aa13.05□□□□□ -0.32
PRPF40A-204ENST00000450303 ACSM6Q6P461 480 aa13.05□□□□□ -0.32
PRPF40A-204ENST00000450303 HSD17B11Q8NBQ5 300 aa13.05□□□□□ -0.32
PRPF40A-204ENST00000450303 OR5C1Q8NGR4 320 aa13.05□□□□□ -0.32
PRPF40A-204ENST00000450303 SCGB1C1Q8TD33 95 aa13.05□□□□□ -0.32
PRPF40A-204ENST00000450303 VN1R17PQ8TDU5 208 aa13.05□□□□□ -0.32
PRPF40A-204ENST00000450303 CACNG8Q8WXS5 425 aa13.05□□□□□ -0.32
PRPF40A-204ENST00000450303 EEF1AKMT3Q96AZ1 226 aa13.05□□□□□ -0.32
PRPF40A-204ENST00000450303 NDUFB8O95169 186 aa13.04□□□□□ -0.32
PRPF40A-204ENST00000450303 RAB2AP61019 212 aa13.04□□□□□ -0.32
PRPF40A-204ENST00000450303 ATP6V1FQ16864 119 aa13.04□□□□□ -0.32
PRPF40A-204ENST00000450303 HAPLN4Q86UW8 402 aa13.04□□□□□ -0.32
PRPF40A-204ENST00000450303 TMEM170AQ8WVE7 144 aa13.04□□□□□ -0.32
PRPF40A-204ENST00000450303 BSCL2Q96G97 398 aaPredicted RBP13.04□□□□□ -0.32
PRPF40A-204ENST00000450303 SLC35E1Q96K37 410 aa13.04□□□□□ -0.32
PRPF40A-204ENST00000450303 ASCL2Q99929 193 aa13.04□□□□□ -0.32
PRPF40A-204ENST00000450303 GAR1Q9NY12 217 aaKnown RBP13.04□□□□□ -0.32
PRPF40A-204ENST00000450303 TRBV7-1A0A0A6YYK4 115 aa13.03□□□□□ -0.32
PRPF40A-204ENST00000450303 TMEM218A2RU14 115 aa13.03□□□□□ -0.32
PRPF40A-204ENST00000450303 SCGB2A1O75556 95 aa13.03□□□□□ -0.32
PRPF40A-204ENST00000450303 CST7O76096 145 aa13.03□□□□□ -0.32
PRPF40A-204ENST00000450303 APOC3P02656 99 aa13.03□□□□□ -0.32
PRPF40A-204ENST00000450303 MFAP4P55083 255 aa13.03□□□□□ -0.32
PRPF40A-204ENST00000450303 DLK1P80370 383 aa13.03□□□□□ -0.32
PRPF40A-204ENST00000450303 C15orf32Q32M92 178 aa13.03□□□□□ -0.32
PRPF40A-204ENST00000450303 BTNL8Q6UX41 500 aa13.03□□□□□ -0.32
PRPF40A-204ENST00000450303 LILRB2Q8N423 598 aa13.03□□□□□ -0.32
PRPF40A-204ENST00000450303 OR2G3Q8NGZ4 309 aa13.03□□□□□ -0.32
PRPF40A-204ENST00000450303 GGACTQ9BVM4 153 aa13.03□□□□□ -0.32
PRPF40A-204ENST00000450303 DMRT1Q9Y5R6 373 aa13.03□□□□□ -0.32
PRPF40A-204ENST00000450303 PMS2P5A8MQ11 134 aa13.02□□□□□ -0.33
PRPF40A-204ENST00000450303 I3L2K1 104 aa13.02□□□□□ -0.33
PRPF40A-204ENST00000450303 TRBV12-3P01733 135 aa13.02□□□□□ -0.33
PRPF40A-204ENST00000450303 NPBWR1P48145 328 aa13.02□□□□□ -0.33
PRPF40A-204ENST00000450303 SLC38A11Q08AI6 406 aa13.02□□□□□ -0.33
PRPF40A-204ENST00000450303 PEA15Q15121 130 aa13.02□□□□□ -0.33
PRPF40A-204ENST00000450303 AKR1C8PQ5T2L2 129 aa13.02□□□□□ -0.33
PRPF40A-204ENST00000450303 DPPA3Q6W0C5 159 aa13.02□□□□□ -0.33
PRPF40A-204ENST00000450303 TMEM182Q6ZP80 229 aaPredicted RBP13.02□□□□□ -0.33
PRPF40A-204ENST00000450303 SLC16A13Q7RTY0 426 aa13.02□□□□□ -0.33
PRPF40A-204ENST00000450303 TMEM217Q8N7C4 229 aa13.02□□□□□ -0.33
PRPF40A-204ENST00000450303 ATP6V0BQ99437 205 aa13.02□□□□□ -0.33
PRPF40A-204ENST00000450303 TXN2Q99757 166 aa13.02□□□□□ -0.33
PRPF40A-204ENST00000450303 PBDC1Q9BVG4 233 aa13.02□□□□□ -0.33
PRPF40A-204ENST00000450303 C21orf62Q9NYP8 219 aa13.02□□□□□ -0.33
PRPF40A-204ENST00000450303 FNDC10F2Z333 226 aa13.01□□□□□ -0.33
PRPF40A-204ENST00000450303 K7EIM0 57 aa13.01□□□□□ -0.33
PRPF40A-204ENST00000450303 SVBPQ8N300 66 aa13.01□□□□□ -0.33
PRPF40A-204ENST00000450303 PEF1Q9UBV8 284 aaKnown RBP13.01□□□□□ -0.33
PRPF40A-204ENST00000450303 TRAV30A0A087WSZ9 112 aa13□□□□□ -0.33
PRPF40A-204ENST00000450303 IGHV3-21A0A0B4J1V1 117 aa13□□□□□ -0.33
PRPF40A-204ENST00000450303 PRSS46E5RG02 174 aa13□□□□□ -0.33
PRPF40A-204ENST00000450303 F8W036 122 aa13□□□□□ -0.33
PRPF40A-204ENST00000450303 HBE1P02100 147 aa13□□□□□ -0.33
PRPF40A-204ENST00000450303 ATP6V0CP27449 155 aa13□□□□□ -0.33
PRPF40A-204ENST00000450303 Q56UQ5 140 aa13□□□□□ -0.33
PRPF40A-204ENST00000450303 ZNF343Q6P1L6 599 aa13□□□□□ -0.33
PRPF40A-204ENST00000450303 FAM213BQ8TBF2 198 aa13□□□□□ -0.33
PRPF40A-204ENST00000450303 TMEM147Q9BVK8 224 aa13□□□□□ -0.33
PRPF40A-204ENST00000450303 ELOVL1Q9BW60 279 aa13□□□□□ -0.33
PRPF40A-204ENST00000450303 FNDC4Q9H6D8 234 aaPredicted RBP13□□□□□ -0.33
PRPF40A-204ENST00000450303 NPVFQ9HCQ7 196 aa13□□□□□ -0.33
PRPF40A-204ENST00000450303 SMCO3A2RU48 225 aa12.99□□□□□ -0.33
PRPF40A-204ENST00000450303 GNG7O60262 68 aa12.99□□□□□ -0.33
PRPF40A-204ENST00000450303 GP9P14770 177 aa12.99□□□□□ -0.33
PRPF40A-204ENST00000450303 SYNJ2BPP57105 145 aa12.99□□□□□ -0.33
PRPF40A-204ENST00000450303 AKR1C1Q04828 323 aa12.99□□□□□ -0.33
PRPF40A-204ENST00000450303 ARL16Q0P5N6 197 aa12.99□□□□□ -0.33
PRPF40A-204ENST00000450303 KLF5Q13887 457 aaPredicted RBP12.99□□□□□ -0.33
PRPF40A-204ENST00000450303 MLANAQ16655 118 aa12.99□□□□□ -0.33
PRPF40A-204ENST00000450303 TMEM116Q8NCL8 245 aa12.99□□□□□ -0.33
PRPF40A-204ENST00000450303 OR4X1Q8NH49 305 aa12.99□□□□□ -0.33
PRPF40A-204ENST00000450303 LYPD6BQ8NI32 183 aa12.99□□□□□ -0.33
PRPF40A-204ENST00000450303 ACY3Q96HD9 319 aa12.99□□□□□ -0.33
PRPF40A-204ENST00000450303 PARD6GQ9BYG4 376 aaPredicted RBP12.99□□□□□ -0.33
PRPF40A-204ENST00000450303 UQCC1Q9NVA1 299 aa12.99□□□□□ -0.33
PRPF40A-204ENST00000450303 SMAD5-AS1Q9Y6J3 95 aa12.99□□□□□ -0.33
PRPF40A-204ENST00000450303 FCGR2BP31994 310 aaPredicted RBP12.98□□□□□ -0.33
PRPF40A-204ENST00000450303 RND2P52198 227 aa12.98□□□□□ -0.33
PRPF40A-204ENST00000450303 GAMTQ14353 236 aa12.98□□□□□ -0.33
PRPF40A-204ENST00000450303 ZNF502Q8TBZ5 544 aa12.98□□□□□ -0.33
PRPF40A-204ENST00000450303 SEC11CQ9BY50 192 aa12.98□□□□□ -0.33
PRPF40A-204ENST00000450303 SH3BGRL3Q9H299 93 aa12.98□□□□□ -0.33
PRPF40A-204ENST00000450303 TMA7Q9Y2S6 64 aaKnown RBP12.98□□□□□ -0.33
PRPF40A-204ENST00000450303 CARHSP1Q9Y2V2 147 aaKnown RBP12.98□□□□□ -0.33
PRPF40A-204ENST00000450303 S4R3C0 116 aa12.98□□□□□ -0.33
PRPF40A-204ENST00000450303 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.97□□□□□ -0.33
PRPF40A-204ENST00000450303 CLN5O75503 358 aa12.97□□□□□ -0.33
PRPF40A-204ENST00000450303 SCO1O75880 301 aa12.97□□□□□ -0.33
PRPF40A-204ENST00000450303 SNAPINO95295 136 aa12.97□□□□□ -0.33
PRPF40A-204ENST00000450303 IGHV3-48P01763 117 aa12.97□□□□□ -0.33
PRPF40A-204ENST00000450303 IGHV3-23P01764 117 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms