RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 ZFAND5O76080 213 aa6.98□□□□□ -1.29
LSM5-208ENST00000450169 ERVK11-1P61568 191 aa6.98□□□□□ -1.29
LSM5-208ENST00000450169 ERVK-16P61578 105 aa6.98□□□□□ -1.29
LSM5-208ENST00000450169 ZNF329Q86UD4 541 aa6.98□□□□□ -1.29
LSM5-208ENST00000450169 RALYQ9UKM9 306 aaKnown RBP6.98□□□□□ -1.29
LSM5-208ENST00000450169 CHCHD2Q9Y6H1 151 aaPredicted RBP6.98□□□□□ -1.29
LSM5-208ENST00000450169 U3KQE9 123 aa6.98□□□□□ -1.29
LSM5-208ENST00000450169 TRAV3A0A0B4J244 114 aa6.98□□□□□ -1.29
LSM5-208ENST00000450169 TMEM30CPA0ZSE6 113 aa6.98□□□□□ -1.29
LSM5-208ENST00000450169 B5MCH6 92 aa6.98□□□□□ -1.29
LSM5-208ENST00000450169 F8W735 103 aaPredicted RBP6.98□□□□□ -1.29
LSM5-208ENST00000450169 P01737 135 aa6.98□□□□□ -1.29
LSM5-208ENST00000450169 SP1P08047 785 aa6.98□□□□□ -1.29
LSM5-208ENST00000450169 C3orf36Q3SXR2 165 aa6.98□□□□□ -1.29
LSM5-208ENST00000450169 Q6ZUT4 128 aa6.98□□□□□ -1.29
LSM5-208ENST00000450169 RPRMLQ8N4K4 120 aa6.98□□□□□ -1.29
LSM5-208ENST00000450169 PRSS3P2Q8NHM4 247 aa6.98□□□□□ -1.29
LSM5-208ENST00000450169 Q8TCH9 128 aa6.98□□□□□ -1.29
LSM5-208ENST00000450169 DDB2Q92466 427 aa6.98□□□□□ -1.29
LSM5-208ENST00000450169 SLC25A2Q9BXI2 301 aa6.98□□□□□ -1.29
LSM5-208ENST00000450169 GFRA4Q9GZZ7 299 aa6.98□□□□□ -1.29
LSM5-208ENST00000450169 PRO0461Q9UI25 63 aa6.98□□□□□ -1.29
LSM5-208ENST00000450169 A0A1B0GWB2 263 aa6.97□□□□□ -1.29
LSM5-208ENST00000450169 OOEPA6NGQ2 149 aa6.97□□□□□ -1.29
LSM5-208ENST00000450169 IGLL5B9A064 214 aa6.97□□□□□ -1.29
LSM5-208ENST00000450169 J3KRW8 73 aa6.97□□□□□ -1.29
LSM5-208ENST00000450169 CNIH1O95406 144 aa6.97□□□□□ -1.29
LSM5-208ENST00000450169 ACP1P24666 158 aa6.97□□□□□ -1.29
LSM5-208ENST00000450169 XGP55808 180 aa6.97□□□□□ -1.29
LSM5-208ENST00000450169 RPL11P62913 178 aaKnown RBP6.97□□□□□ -1.29
LSM5-208ENST00000450169 FOXF2Q12947 444 aa6.97□□□□□ -1.29
LSM5-208ENST00000450169 SRSF6Q13247 344 aaKnown RBP6.97□□□□□ -1.29
LSM5-208ENST00000450169 AMTNQ6UX39 209 aa6.97□□□□□ -1.29
LSM5-208ENST00000450169 CACNG8Q8WXS5 425 aa6.97□□□□□ -1.29
LSM5-208ENST00000450169 CHAC1Q9BUX1 264 aa6.97□□□□□ -1.29
LSM5-208ENST00000450169 MRPL32Q9BYC8 188 aaKnown RBP6.97□□□□□ -1.29
LSM5-208ENST00000450169 PRSS22Q9GZN4 317 aa6.97□□□□□ -1.29
LSM5-208ENST00000450169 HIGD1BQ9P298 99 aa6.97□□□□□ -1.29
LSM5-208ENST00000450169 KLF13Q9Y2Y9 288 aaPredicted RBP6.97□□□□□ -1.29
LSM5-208ENST00000450169 IGKV1OR2-108A0A075B7D4 117 aa6.97□□□□□ -1.29
LSM5-208ENST00000450169 A0A096LNJ9 63 aa6.97□□□□□ -1.29
LSM5-208ENST00000450169 TRAV5A0A0B4J249 113 aa6.97□□□□□ -1.29
LSM5-208ENST00000450169 NPIPB6E9PJ23 425 aa6.97□□□□□ -1.29
LSM5-208ENST00000450169 FOXI1Q12951 378 aa6.97□□□□□ -1.29
LSM5-208ENST00000450169 OR1C1Q15619 314 aa6.97□□□□□ -1.29
LSM5-208ENST00000450169 MORN5Q5VZ52 161 aa6.97□□□□□ -1.29
LSM5-208ENST00000450169 LINC00322Q6ZN03 302 aaPredicted RBP6.97□□□□□ -1.29
LSM5-208ENST00000450169 Q8IYB0 196 aa6.97□□□□□ -1.29
LSM5-208ENST00000450169 ZNF414Q96IQ9 312 aa6.97□□□□□ -1.29
LSM5-208ENST00000450169 FAM167A-AS1Q96KT0 104 aa6.97□□□□□ -1.29
LSM5-208ENST00000450169 TM2D2Q9BX73 214 aa6.97□□□□□ -1.29
LSM5-208ENST00000450169 TMEM140Q9NV12 185 aa6.97□□□□□ -1.29
LSM5-208ENST00000450169 SS18L1O75177 396 aaPredicted RBP6.96□□□□□ -1.3
LSM5-208ENST00000450169 CLEC3BP05452 202 aa6.96□□□□□ -1.3
LSM5-208ENST00000450169 IGHV4-34P06331 123 aa6.96□□□□□ -1.3
LSM5-208ENST00000450169 CT45A10P0DMU9 189 aa6.96□□□□□ -1.3
LSM5-208ENST00000450169 CD40P25942 277 aa6.96□□□□□ -1.3
LSM5-208ENST00000450169 DSCR4P56555 118 aaPredicted RBP6.96□□□□□ -1.3
LSM5-208ENST00000450169 GNG5P63218 68 aa6.96□□□□□ -1.3
LSM5-208ENST00000450169 OSR1Q8TAX0 266 aaPredicted RBP6.96□□□□□ -1.3
LSM5-208ENST00000450169 C1QTNF4Q9BXJ3 329 aa6.96□□□□□ -1.3
LSM5-208ENST00000450169 ENY2Q9NPA8 101 aa6.96□□□□□ -1.3
LSM5-208ENST00000450169 CABIN1Q9Y6J0 2220 aa6.96□□□□□ -1.3
LSM5-208ENST00000450169 IGHV3-43A0A0B4J1X8 118 aa6.96□□□□□ -1.3
LSM5-208ENST00000450169 SRRM4A7MD48 611 aaKnown RBP6.96□□□□□ -1.3
LSM5-208ENST00000450169 DEFB108AA8MXU0 73 aa6.96□□□□□ -1.3
LSM5-208ENST00000450169 DNPH1O43598 174 aa6.96□□□□□ -1.3
LSM5-208ENST00000450169 PSPNO60542 156 aa6.96□□□□□ -1.3
LSM5-208ENST00000450169 BRI3O95415 125 aa6.96□□□□□ -1.3
LSM5-208ENST00000450169 LTAP01374 205 aa6.96□□□□□ -1.3
LSM5-208ENST00000450169 IGHV3-9P01782 118 aa6.96□□□□□ -1.3
LSM5-208ENST00000450169 IGHV3-43DP0DP04 118 aa6.96□□□□□ -1.3
LSM5-208ENST00000450169 PYYP10082 97 aa6.96□□□□□ -1.3
LSM5-208ENST00000450169 LIFP15018 202 aa6.96□□□□□ -1.3
LSM5-208ENST00000450169 RPL32P62910 135 aaKnown RBP6.96□□□□□ -1.3
LSM5-208ENST00000450169 ZNF146Q15072 292 aa6.96□□□□□ -1.3
LSM5-208ENST00000450169 C3AR1Q16581 482 aa6.96□□□□□ -1.3
LSM5-208ENST00000450169 TET2Q6N021 2002 aaPredicted RBP6.96□□□□□ -1.3
LSM5-208ENST00000450169 LCNL1Q6ZST4 164 aa6.96□□□□□ -1.3
LSM5-208ENST00000450169 MOB3BQ86TA1 216 aa6.96□□□□□ -1.3
LSM5-208ENST00000450169 SMIM20Q8N5G0 67 aa6.96□□□□□ -1.3
LSM5-208ENST00000450169 C16orf92Q96LL3 132 aa6.96□□□□□ -1.3
LSM5-208ENST00000450169 SGK494Q96LW2 274 aa6.96□□□□□ -1.3
LSM5-208ENST00000450169 FAM234AQ9H0X4 552 aa6.96□□□□□ -1.3
LSM5-208ENST00000450169 UFC1Q9Y3C8 167 aa6.96□□□□□ -1.3
LSM5-208ENST00000450169 VPS13AQ96RL7 3174 aa6.95□□□□□ -1.3
LSM5-208ENST00000450169 C19orf71A6NCJ1 209 aa6.95□□□□□ -1.3
LSM5-208ENST00000450169 C15orf61A6NNL5 157 aa6.95□□□□□ -1.3
LSM5-208ENST00000450169 MT-CO3P00414 261 aa6.95□□□□□ -1.3
LSM5-208ENST00000450169 FAM106CPP0CH98 169 aa6.95□□□□□ -1.3
LSM5-208ENST00000450169 PLGLB1Q02325 96 aa6.95□□□□□ -1.3
LSM5-208ENST00000450169 FHL3Q13643 280 aa6.95□□□□□ -1.3
LSM5-208ENST00000450169 FAM106AQ4KMX7 169 aa6.95□□□□□ -1.3
LSM5-208ENST00000450169 CEND1Q8N111 149 aa6.95□□□□□ -1.3
LSM5-208ENST00000450169 ATP6V0E2Q8NHE4 81 aa6.95□□□□□ -1.3
LSM5-208ENST00000450169 DAZAP1Q96EP5 407 aaKnown RBP6.95□□□□□ -1.3
LSM5-208ENST00000450169 PAXXQ9BUH6 204 aa6.95□□□□□ -1.3
LSM5-208ENST00000450169 MLST8Q9BVC4 326 aa6.95□□□□□ -1.3
LSM5-208ENST00000450169 POLDIP2Q9Y2S7 368 aa6.95□□□□□ -1.3
LSM5-208ENST00000450169 EML6Q6ZMW3 1958 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms