RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 ALG5Q9Y673 324 aa10.56□□□□□ -0.72
GTF3C3-206ENST00000448539 IGHV3-66A0A0C4DH42 116 aa10.55□□□□□ -0.72
GTF3C3-206ENST00000448539 TSPAN4O14817 238 aa10.55□□□□□ -0.72
GTF3C3-206ENST00000448539 HNRNPCP07910 306 aaKnown RBP eCLIP10.55□□□□□ -0.72
GTF3C3-206ENST00000448539 DLK1P80370 383 aa10.55□□□□□ -0.72
GTF3C3-206ENST00000448539 ZNF90Q03938 601 aa10.55□□□□□ -0.72
GTF3C3-206ENST00000448539 LRRC37A5PQ49AS3 106 aa10.55□□□□□ -0.72
GTF3C3-206ENST00000448539 TMEM144Q7Z5S9 345 aa10.55□□□□□ -0.72
GTF3C3-206ENST00000448539 THAP8Q8NA92 274 aa10.55□□□□□ -0.72
GTF3C3-206ENST00000448539 ST8SIA2Q92186 375 aa10.55□□□□□ -0.72
GTF3C3-206ENST00000448539 SPAG8Q99932 426 aaPredicted RBP10.55□□□□□ -0.72
GTF3C3-206ENST00000448539 NEURL2Q9BR09 285 aa10.55□□□□□ -0.72
GTF3C3-206ENST00000448539 PBDC1Q9BVG4 233 aa10.55□□□□□ -0.72
GTF3C3-206ENST00000448539 RABAC1Q9UI14 185 aa10.55□□□□□ -0.72
GTF3C3-206ENST00000448539 IGKV1D-37A0A075B6S9 117 aa10.54□□□□□ -0.72
GTF3C3-206ENST00000448539 FAM24AA6NFZ4 105 aa10.54□□□□□ -0.72
GTF3C3-206ENST00000448539 PMS2P5A8MQ11 134 aa10.54□□□□□ -0.72
GTF3C3-206ENST00000448539 FNDC10F2Z333 226 aa10.54□□□□□ -0.72
GTF3C3-206ENST00000448539 CCNKO75909 580 aa10.54□□□□□ -0.72
GTF3C3-206ENST00000448539 CFDP00746 253 aaPredicted RBP10.54□□□□□ -0.72
GTF3C3-206ENST00000448539 CRYBB3P26998 211 aa10.54□□□□□ -0.72
GTF3C3-206ENST00000448539 H2BFSP57053 126 aa10.54□□□□□ -0.72
GTF3C3-206ENST00000448539 RPL11P62913 178 aaKnown RBP10.54□□□□□ -0.72
GTF3C3-206ENST00000448539 PAFAH1B2P68402 229 aa10.54□□□□□ -0.72
GTF3C3-206ENST00000448539 OR2F1Q13607 317 aa10.54□□□□□ -0.72
GTF3C3-206ENST00000448539 TCF24Q7RTU0 167 aa10.54□□□□□ -0.72
GTF3C3-206ENST00000448539 STX12Q86Y82 276 aa10.54□□□□□ -0.72
GTF3C3-206ENST00000448539 RNF125Q96EQ8 232 aa10.54□□□□□ -0.72
GTF3C3-206ENST00000448539 GGACTQ9BVM4 153 aa10.54□□□□□ -0.72
GTF3C3-206ENST00000448539 VSIRQ9H7M9 311 aa10.54□□□□□ -0.72
GTF3C3-206ENST00000448539 TUBA4BQ9H853 241 aa10.54□□□□□ -0.72
GTF3C3-206ENST00000448539 NPVFQ9HCQ7 196 aa10.54□□□□□ -0.72
GTF3C3-206ENST00000448539 LYRM2Q9NU23 88 aaPredicted RBP10.54□□□□□ -0.72
GTF3C3-206ENST00000448539 OR4C46A6NHA9 309 aa10.53□□□□□ -0.72
GTF3C3-206ENST00000448539 DEDDO75618 318 aa10.53□□□□□ -0.72
GTF3C3-206ENST00000448539 CST7O76096 145 aa10.53□□□□□ -0.72
GTF3C3-206ENST00000448539 APOHP02749 345 aaPredicted RBP10.53□□□□□ -0.72
GTF3C3-206ENST00000448539 CD7P09564 240 aa10.53□□□□□ -0.72
GTF3C3-206ENST00000448539 PET100P0DJ07 73 aa10.53□□□□□ -0.72
GTF3C3-206ENST00000448539 NUP62P37198 522 aaPredicted RBP10.53□□□□□ -0.72
GTF3C3-206ENST00000448539 EIF2B2P49770 351 aaKnown RBP10.53□□□□□ -0.72
GTF3C3-206ENST00000448539 LYZP61626 148 aa10.53□□□□□ -0.72
GTF3C3-206ENST00000448539 Q8N1Y9 231 aa10.53□□□□□ -0.72
GTF3C3-206ENST00000448539 LILRB2Q8N423 598 aa10.53□□□□□ -0.72
GTF3C3-206ENST00000448539 TMEM217Q8N7C4 229 aa10.53□□□□□ -0.72
GTF3C3-206ENST00000448539 BPIFCQ8NFQ6 507 aa10.53□□□□□ -0.72
GTF3C3-206ENST00000448539 MED28Q9H204 178 aa10.53□□□□□ -0.72
GTF3C3-206ENST00000448539 IGKV3-7A0A075B6H7 116 aa10.52□□□□□ -0.73
GTF3C3-206ENST00000448539 IGKV1OR2-108A0A075B7D4 117 aa10.52□□□□□ -0.73
GTF3C3-206ENST00000448539 E5RGE8 158 aa10.52□□□□□ -0.73
GTF3C3-206ENST00000448539 DNASE2O00115 360 aaPredicted RBP10.52□□□□□ -0.73
GTF3C3-206ENST00000448539 DFFBO76075 338 aa10.52□□□□□ -0.73
GTF3C3-206ENST00000448539 IGHV4-30-4P0DP06 118 aa10.52□□□□□ -0.73
GTF3C3-206ENST00000448539 S100A11P31949 105 aa10.52□□□□□ -0.73
GTF3C3-206ENST00000448539 P2RY1P47900 373 aa10.52□□□□□ -0.73
GTF3C3-206ENST00000448539 SULT1A1P50225 295 aa10.52□□□□□ -0.73
GTF3C3-206ENST00000448539 HBG1P69891 147 aa10.52□□□□□ -0.73
GTF3C3-206ENST00000448539 HBG2P69892 147 aa10.52□□□□□ -0.73
GTF3C3-206ENST00000448539 SLC38A11Q08AI6 406 aa10.52□□□□□ -0.73
GTF3C3-206ENST00000448539 USF2Q15853 346 aaPredicted RBP10.52□□□□□ -0.73
GTF3C3-206ENST00000448539 TEPPQ6URK8 271 aa10.52□□□□□ -0.73
GTF3C3-206ENST00000448539 TMEM252Q8N6L7 170 aa10.52□□□□□ -0.73
GTF3C3-206ENST00000448539 PPP1R1CQ8WVI7 109 aa10.52□□□□□ -0.73
GTF3C3-206ENST00000448539 PPP1R14BQ96C90 147 aa10.52□□□□□ -0.73
GTF3C3-206ENST00000448539 B9D2Q9BPU9 175 aa10.52□□□□□ -0.73
GTF3C3-206ENST00000448539 SLC25A31Q9H0C2 315 aa10.52□□□□□ -0.73
GTF3C3-206ENST00000448539 C11orf1Q9H5F2 150 aa10.52□□□□□ -0.73
GTF3C3-206ENST00000448539 OR11H12B2RN74 326 aa10.51□□□□□ -0.73
GTF3C3-206ENST00000448539 S100A7P31151 101 aa10.51□□□□□ -0.73
GTF3C3-206ENST00000448539 TFPI2P48307 235 aa10.51□□□□□ -0.73
GTF3C3-206ENST00000448539 ARL16Q0P5N6 197 aa10.51□□□□□ -0.73
GTF3C3-206ENST00000448539 CYP2G1PQ6ZSU1 146 aa10.51□□□□□ -0.73
GTF3C3-206ENST00000448539 GBGT1Q8N5D6 347 aa10.51□□□□□ -0.73
GTF3C3-206ENST00000448539 IGSF23A1L1A6 192 aa10.5□□□□□ -0.73
GTF3C3-206ENST00000448539 HELTA6NFD8 242 aa10.5□□□□□ -0.73
GTF3C3-206ENST00000448539 FRMD6-AS1P0C7T7 363 aa10.5□□□□□ -0.73
GTF3C3-206ENST00000448539 AP2S1P53680 142 aaPredicted RBP10.5□□□□□ -0.73
GTF3C3-206ENST00000448539 CMC4P56277 68 aaPredicted RBP10.5□□□□□ -0.73
GTF3C3-206ENST00000448539 SELENOTP62341 195 aa10.5□□□□□ -0.73
GTF3C3-206ENST00000448539 RAB31Q13636 194 aa10.5□□□□□ -0.73
GTF3C3-206ENST00000448539 OXA1LQ15070 435 aa10.5□□□□□ -0.73
GTF3C3-206ENST00000448539 FAM90A2PQ658T7 463 aa10.5□□□□□ -0.73
GTF3C3-206ENST00000448539 WFDC3Q8IUB2 231 aa10.5□□□□□ -0.73
GTF3C3-206ENST00000448539 UQCC1Q9NVA1 299 aa10.5□□□□□ -0.73
GTF3C3-206ENST00000448539 OR5AC2Q9NZP5 309 aa10.5□□□□□ -0.73
GTF3C3-206ENST00000448539 U3KQE9 123 aa10.5□□□□□ -0.73
GTF3C3-206ENST00000448539 A8MZ25 164 aa10.49□□□□□ -0.73
GTF3C3-206ENST00000448539 MPC2O95563 127 aa10.49□□□□□ -0.73
GTF3C3-206ENST00000448539 ORM2P19652 201 aa10.49□□□□□ -0.73
GTF3C3-206ENST00000448539 GATA2P23769 480 aaPredicted RBP10.49□□□□□ -0.73
GTF3C3-206ENST00000448539 FCN2Q15485 313 aa10.49□□□□□ -0.73
GTF3C3-206ENST00000448539 ATP6V1FQ16864 119 aa10.49□□□□□ -0.73
GTF3C3-206ENST00000448539 C16orf54Q6UWD8 224 aa10.49□□□□□ -0.73
GTF3C3-206ENST00000448539 S100A7AQ86SG5 101 aa10.49□□□□□ -0.73
GTF3C3-206ENST00000448539 DEFB125Q8N687 156 aa10.49□□□□□ -0.73
GTF3C3-206ENST00000448539 STXBP6Q8NFX7 210 aa10.49□□□□□ -0.73
GTF3C3-206ENST00000448539 OR1B1Q8NGR6 318 aa10.49□□□□□ -0.73
GTF3C3-206ENST00000448539 ASCL2Q99929 193 aa10.49□□□□□ -0.73
GTF3C3-206ENST00000448539 TMEM147Q9BVK8 224 aa10.49□□□□□ -0.73
GTF3C3-206ENST00000448539 MS4A6AQ9H2W1 248 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms