RNA–Protein interactions for RNA: ENST00000448078.1

USP49-205, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 3

Gene USP49, Length 480 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-205ENST00000448078 H1FOOQ8IZA3 346 aaPredicted RBP4.06□□□□□ -1.76
USP49-205ENST00000448078 SPAG16Q8N0X2 631 aa4.06□□□□□ -1.76
USP49-205ENST00000448078 CSNK1G2-AS1Q8NCQ2 148 aa4.06□□□□□ -1.76
USP49-205ENST00000448078 CCDC197Q8NCU1 140 aa4.06□□□□□ -1.76
USP49-205ENST00000448078 LSM10Q969L4 123 aaKnown RBP4.06□□□□□ -1.76
USP49-205ENST00000448078 TMEM230Q96A57 120 aa4.06□□□□□ -1.76
USP49-205ENST00000448078 ZNF414Q96IQ9 312 aa4.06□□□□□ -1.76
USP49-205ENST00000448078 PGLYRP3Q96LB9 341 aa4.06□□□□□ -1.76
USP49-205ENST00000448078 CABLES2Q9BTV7 478 aa4.06□□□□□ -1.76
USP49-205ENST00000448078 NXF2Q9GZY0 626 aaKnown RBP4.06□□□□□ -1.76
USP49-205ENST00000448078 LPAR5Q9H1C0 372 aa4.06□□□□□ -1.76
USP49-205ENST00000448078 VSIRQ9H7M9 311 aa4.06□□□□□ -1.76
USP49-205ENST00000448078 DIMT1Q9UNQ2 313 aaKnown RBP4.06□□□□□ -1.76
USP49-205ENST00000448078 F11RQ9Y624 299 aaKnown RBP4.06□□□□□ -1.76
USP49-205ENST00000448078 A0A075B6Q4 140 aa4.05□□□□□ -1.76
USP49-205ENST00000448078 IGHV3-21A0A0B4J1V1 117 aa4.05□□□□□ -1.76
USP49-205ENST00000448078 TEX50A0A1B0GTY4 177 aa4.05□□□□□ -1.76
USP49-205ENST00000448078 PNMA8CA0A1B0GUJ8 204 aa4.05□□□□□ -1.76
USP49-205ENST00000448078 LOC100130705A0A1B0GUX0 176 aa4.05□□□□□ -1.76
USP49-205ENST00000448078 IGLC7A0M8Q6 106 aa4.05□□□□□ -1.76
USP49-205ENST00000448078 EFCAB10A6NFE3 127 aa4.05□□□□□ -1.76
USP49-205ENST00000448078 E7EUB6 86 aa4.05□□□□□ -1.76
USP49-205ENST00000448078 F5H768 121 aa4.05□□□□□ -1.76
USP49-205ENST00000448078 MYL12BO14950 172 aa4.05□□□□□ -1.76
USP49-205ENST00000448078 RBFOX2O43251 390 aaKnown RBP eCLIP4.05□□□□□ -1.76
USP49-205ENST00000448078 CIB2O75838 187 aa4.05□□□□□ -1.76
USP49-205ENST00000448078 ARL6IP5O75915 188 aa4.05□□□□□ -1.76
USP49-205ENST00000448078 FCGR3AP08637 254 aa4.05□□□□□ -1.76
USP49-205ENST00000448078 GIG44P09565 113 aaPredicted RBP4.05□□□□□ -1.76
USP49-205ENST00000448078 SMIM18P0DKX4 95 aa4.05□□□□□ -1.76
USP49-205ENST00000448078 CD37P11049 281 aa4.05□□□□□ -1.76
USP49-205ENST00000448078 ID1P41134 155 aa4.05□□□□□ -1.76
USP49-205ENST00000448078 SUB1P53999 127 aaKnown RBP eCLIP4.05□□□□□ -1.76
USP49-205ENST00000448078 TMEM50BP56557 158 aa4.05□□□□□ -1.76
USP49-205ENST00000448078 RPS11P62280 158 aaKnown RBP eCLIP4.05□□□□□ -1.76
USP49-205ENST00000448078 DLK1P80370 383 aa4.05□□□□□ -1.76
USP49-205ENST00000448078 ERHP84090 104 aaKnown RBP4.05□□□□□ -1.76
USP49-205ENST00000448078 RRN3P1Q2M238 152 aa4.05□□□□□ -1.76
USP49-205ENST00000448078 PSMG4Q5JS54 123 aa4.05□□□□□ -1.76
USP49-205ENST00000448078 OGFRL1Q5TC84 451 aaPredicted RBP4.05□□□□□ -1.76
USP49-205ENST00000448078 C1orf146Q5VVC0 180 aa4.05□□□□□ -1.76
USP49-205ENST00000448078 ZNF600Q6ZNG1 722 aa4.05□□□□□ -1.76
USP49-205ENST00000448078 ZFP41Q8N8Y5 198 aa4.05□□□□□ -1.76
USP49-205ENST00000448078 OR5AP2Q8NGF4 316 aa4.05□□□□□ -1.76
USP49-205ENST00000448078 OR1P1Q8NH06 330 aa4.05□□□□□ -1.76
USP49-205ENST00000448078 ZNRF2Q8NHG8 242 aa4.05□□□□□ -1.76
USP49-205ENST00000448078 TSC22D3Q99576 134 aa4.05□□□□□ -1.76
USP49-205ENST00000448078 TAS2R8Q9NYW2 309 aa4.05□□□□□ -1.76
USP49-205ENST00000448078 PRNDQ9UKY0 176 aa4.05□□□□□ -1.76
USP49-205ENST00000448078 OR51B2Q9Y5P1 312 aa4.05□□□□□ -1.76
USP49-205ENST00000448078 UBR4Q5T4S7 5183 aa4.04□□□□□ -1.76
USP49-205ENST00000448078 TRAV9-2A0A087WT02 112 aa4.04□□□□□ -1.76
USP49-205ENST00000448078 IGHV3-66A0A0C4DH42 116 aa4.04□□□□□ -1.76
USP49-205ENST00000448078 K7EQG2 157 aa4.04□□□□□ -1.76
USP49-205ENST00000448078 ADAP1O75689 374 aa4.04□□□□□ -1.76
USP49-205ENST00000448078 SNCAP37840 140 aa4.04□□□□□ -1.76
USP49-205ENST00000448078 B2MP61769 119 aa4.04□□□□□ -1.76
USP49-205ENST00000448078 GNGT1P63211 74 aa4.04□□□□□ -1.76
USP49-205ENST00000448078 ZNF415Q09FC8 603 aa4.04□□□□□ -1.76
USP49-205ENST00000448078 UNC119Q13432 240 aa4.04□□□□□ -1.76
USP49-205ENST00000448078 MSMO1Q15800 293 aa4.04□□□□□ -1.76
USP49-205ENST00000448078 C2orf76Q3KRA6 126 aa4.04□□□□□ -1.76
USP49-205ENST00000448078 TIMM50Q3ZCQ8 353 aa4.04□□□□□ -1.76
USP49-205ENST00000448078 SPATA31B1PQ5VZV4 182 aa4.04□□□□□ -1.76
USP49-205ENST00000448078 KRTAP5-11Q6L8G4 156 aa4.04□□□□□ -1.76
USP49-205ENST00000448078 MZT2BQ6NZ67 158 aa4.04□□□□□ -1.76
USP49-205ENST00000448078 CNIH2Q6PI25 160 aa4.04□□□□□ -1.76
USP49-205ENST00000448078 TOMM20LQ6UXN7 152 aa4.04□□□□□ -1.76
USP49-205ENST00000448078 Q6ZS49 121 aa4.04□□□□□ -1.76
USP49-205ENST00000448078 CBR4Q8N4T8 237 aa4.04□□□□□ -1.76
USP49-205ENST00000448078 OR10W1Q8NGF6 305 aa4.04□□□□□ -1.76
USP49-205ENST00000448078 OR10R2Q8NGX6 335 aa4.04□□□□□ -1.76
USP49-205ENST00000448078 FAM3DQ96BQ1 224 aa4.04□□□□□ -1.76
USP49-205ENST00000448078 C9orf16Q9BUW7 83 aa4.04□□□□□ -1.76
USP49-205ENST00000448078 SCRT1Q9BWW7 348 aa4.04□□□□□ -1.76
USP49-205ENST00000448078 DCSTAMPQ9H295 470 aa4.04□□□□□ -1.76
USP49-205ENST00000448078 TRAV30A0A087WSZ9 112 aa4.03□□□□□ -1.76
USP49-205ENST00000448078 LYRM9A8MSI8 78 aa4.03□□□□□ -1.76
USP49-205ENST00000448078 K7EIM0 57 aa4.03□□□□□ -1.76
USP49-205ENST00000448078 SLC17A2O00624 439 aa4.03□□□□□ -1.76
USP49-205ENST00000448078 EI24O14681 340 aa4.03□□□□□ -1.76
USP49-205ENST00000448078 SMR3BP02814 79 aaPredicted RBP4.03□□□□□ -1.76
USP49-205ENST00000448078 ATP5G1P05496 136 aa4.03□□□□□ -1.76
USP49-205ENST00000448078 C4BPBP20851 252 aa4.03□□□□□ -1.76
USP49-205ENST00000448078 NFYAP23511 347 aaPredicted RBP4.03□□□□□ -1.76
USP49-205ENST00000448078 DTYMKP23919 212 aa4.03□□□□□ -1.76
USP49-205ENST00000448078 S100GP29377 79 aa4.03□□□□□ -1.76
USP49-205ENST00000448078 P2RY1P47900 373 aa4.03□□□□□ -1.76
USP49-205ENST00000448078 ATP5G3P48201 142 aa4.03□□□□□ -1.76
USP49-205ENST00000448078 WNT4P56705 351 aa4.03□□□□□ -1.76
USP49-205ENST00000448078 RPL30P62888 115 aaKnown RBP4.03□□□□□ -1.76
USP49-205ENST00000448078 QRFPP83859 136 aa4.03□□□□□ -1.76
USP49-205ENST00000448078 TRAM1Q15629 374 aa4.03□□□□□ -1.76
USP49-205ENST00000448078 EBLN2Q6P2I7 272 aa4.03□□□□□ -1.76
USP49-205ENST00000448078 ZNF705AQ6ZN79 300 aaPredicted RBP4.03□□□□□ -1.76
USP49-205ENST00000448078 SSX7Q7RTT5 188 aa4.03□□□□□ -1.76
USP49-205ENST00000448078 OR4A16Q8NH70 328 aa4.03□□□□□ -1.76
USP49-205ENST00000448078 DEFB104AQ8WTQ1 72 aa4.03□□□□□ -1.76
USP49-205ENST00000448078 Q8WTZ3 238 aa4.03□□□□□ -1.76
USP49-205ENST00000448078 PINX1Q96BK5 328 aaKnown RBP4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms