RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 IGHV4-30-2A0A087WSY4 118 aa7.55□□□□□ -1.2
COL6A4P1-201ENST00000446690 I3L2K1 104 aa7.55□□□□□ -1.2
COL6A4P1-201ENST00000446690 NPFFO15130 113 aa7.55□□□□□ -1.2
COL6A4P1-201ENST00000446690 TRGC2P03986 189 aa7.55□□□□□ -1.2
COL6A4P1-201ENST00000446690 FABP4P15090 132 aa7.55□□□□□ -1.2
COL6A4P1-201ENST00000446690 CRYBB3P26998 211 aa7.55□□□□□ -1.2
COL6A4P1-201ENST00000446690 RELQ04864 619 aaPredicted RBP7.55□□□□□ -1.2
COL6A4P1-201ENST00000446690 ZNF562Q6V9R5 426 aa7.55□□□□□ -1.2
COL6A4P1-201ENST00000446690 PIP4P2Q8N4L2 257 aa7.55□□□□□ -1.2
COL6A4P1-201ENST00000446690 OR5R1Q8NH85 324 aa7.55□□□□□ -1.2
COL6A4P1-201ENST00000446690 ARPC1AQ92747 370 aa7.55□□□□□ -1.2
COL6A4P1-201ENST00000446690 FAM167A-AS1Q96KT0 104 aa7.55□□□□□ -1.2
COL6A4P1-201ENST00000446690 TRGV9Q99603 122 aa7.55□□□□□ -1.2
COL6A4P1-201ENST00000446690 SRSF8Q9BRL6 282 aaKnown RBP7.55□□□□□ -1.2
COL6A4P1-201ENST00000446690 PAXXQ9BUH6 204 aa7.55□□□□□ -1.2
COL6A4P1-201ENST00000446690 CTDSP1Q9GZU7 261 aa7.55□□□□□ -1.2
COL6A4P1-201ENST00000446690 MED13LQ71F56 2210 aa7.55□□□□□ -1.2
COL6A4P1-201ENST00000446690 CENPVL3A0A0U1RRI6 287 aa7.54□□□□□ -1.2
COL6A4P1-201ENST00000446690 H7BYZ3 331 aa7.54□□□□□ -1.2
COL6A4P1-201ENST00000446690 GOSR1O95249 250 aa7.54□□□□□ -1.2
COL6A4P1-201ENST00000446690 BRS3P32247 399 aa7.54□□□□□ -1.2
COL6A4P1-201ENST00000446690 LYZP61626 148 aa7.54□□□□□ -1.2
COL6A4P1-201ENST00000446690 TIGITQ495A1 244 aa7.54□□□□□ -1.2
COL6A4P1-201ENST00000446690 LINC01551Q86U37 167 aa7.54□□□□□ -1.2
COL6A4P1-201ENST00000446690 OR5B12Q96R08 314 aa7.54□□□□□ -1.2
COL6A4P1-201ENST00000446690 RASL11BQ9BPW5 248 aa7.54□□□□□ -1.2
COL6A4P1-201ENST00000446690 NAV3Q8IVL0 2385 aa7.54□□□□□ -1.2
COL6A4P1-201ENST00000446690 HYPMO75409 117 aa7.53□□□□□ -1.2
COL6A4P1-201ENST00000446690 PSG1P11464 419 aa7.53□□□□□ -1.2
COL6A4P1-201ENST00000446690 GALR1P47211 349 aa7.53□□□□□ -1.2
COL6A4P1-201ENST00000446690 NDPQ00604 133 aa7.53□□□□□ -1.2
COL6A4P1-201ENST00000446690 Q8N6K4 173 aa7.53□□□□□ -1.2
COL6A4P1-201ENST00000446690 OCC1Q8TAD7 63 aa7.53□□□□□ -1.2
COL6A4P1-201ENST00000446690 BLNKQ8WV28 456 aa7.53□□□□□ -1.2
COL6A4P1-201ENST00000446690 AJUBAQ96IF1 538 aa7.53□□□□□ -1.2
COL6A4P1-201ENST00000446690 FAM210BQ96KR6 192 aa7.53□□□□□ -1.2
COL6A4P1-201ENST00000446690 PACRGQ96M98 296 aaPredicted RBP7.53□□□□□ -1.2
COL6A4P1-201ENST00000446690 PPP1R14DQ9NXH3 145 aa7.53□□□□□ -1.2
COL6A4P1-201ENST00000446690 TRBV20OR9-2A0A075B6H5 130 aa7.53□□□□□ -1.2
COL6A4P1-201ENST00000446690 HELTA6NFD8 242 aa7.53□□□□□ -1.2
COL6A4P1-201ENST00000446690 A8MWP6 167 aa7.53□□□□□ -1.2
COL6A4P1-201ENST00000446690 K7EIM0 57 aa7.53□□□□□ -1.2
COL6A4P1-201ENST00000446690 TRGC1P0CF51 173 aa7.53□□□□□ -1.2
COL6A4P1-201ENST00000446690 IGLC1P0CG04 106 aa7.53□□□□□ -1.2
COL6A4P1-201ENST00000446690 NUTF2P61970 127 aaKnown RBP7.53□□□□□ -1.2
COL6A4P1-201ENST00000446690 EBI3Q14213 229 aa7.53□□□□□ -1.2
COL6A4P1-201ENST00000446690 LEMD1Q68G75 181 aa7.53□□□□□ -1.2
COL6A4P1-201ENST00000446690 BRD3OSQ6XYD6 125 aa7.53□□□□□ -1.2
COL6A4P1-201ENST00000446690 Q8N9W7 124 aa7.53□□□□□ -1.2
COL6A4P1-201ENST00000446690 FRZBQ92765 325 aa7.53□□□□□ -1.2
COL6A4P1-201ENST00000446690 ANAPC16Q96DE5 110 aa7.53□□□□□ -1.2
COL6A4P1-201ENST00000446690 ELOVL1Q9BW60 279 aa7.53□□□□□ -1.2
COL6A4P1-201ENST00000446690 C1RLQ9NZP8 487 aa7.53□□□□□ -1.2
COL6A4P1-201ENST00000446690 SH2D7A6NKC9 451 aaPredicted RBP7.52□□□□□ -1.2
COL6A4P1-201ENST00000446690 GGTLC3B5MD39 225 aa7.52□□□□□ -1.2
COL6A4P1-201ENST00000446690 NDUFS8O00217 210 aa7.52□□□□□ -1.2
COL6A4P1-201ENST00000446690 IGHV3-23P01764 117 aa7.52□□□□□ -1.2
COL6A4P1-201ENST00000446690 COX6B1P14854 86 aa7.52□□□□□ -1.2
COL6A4P1-201ENST00000446690 PAX8Q06710 450 aa7.52□□□□□ -1.2
COL6A4P1-201ENST00000446690 USF2Q15853 346 aaPredicted RBP7.52□□□□□ -1.2
COL6A4P1-201ENST00000446690 ASPHD1Q5U4P2 390 aa7.52□□□□□ -1.2
COL6A4P1-201ENST00000446690 HIST1H2BLQ99880 126 aa7.52□□□□□ -1.2
COL6A4P1-201ENST00000446690 IGHV7-81A0A0B4J1V7 117 aa7.52□□□□□ -1.21
COL6A4P1-201ENST00000446690 RANP62826 216 aaKnown RBP7.52□□□□□ -1.21
COL6A4P1-201ENST00000446690 OR1L6Q8NGR2 347 aa7.52□□□□□ -1.21
COL6A4P1-201ENST00000446690 USP24Q9UPU5 2620 aa7.51□□□□□ -1.21
COL6A4P1-201ENST00000446690 TRAV40A0A0B4J280 105 aa7.51□□□□□ -1.21
COL6A4P1-201ENST00000446690 A0A0U1RQK1 487 aa7.51□□□□□ -1.21
COL6A4P1-201ENST00000446690 MDFIC2A0A1B0GVS7 189 aa7.51□□□□□ -1.21
COL6A4P1-201ENST00000446690 A0A1W2PPQ1 181 aa7.51□□□□□ -1.21
COL6A4P1-201ENST00000446690 A0A1W2PRE2 83 aa7.51□□□□□ -1.21
COL6A4P1-201ENST00000446690 VWC2LB2RUY7 222 aa7.51□□□□□ -1.21
COL6A4P1-201ENST00000446690 H3BTX0 84 aa7.51□□□□□ -1.21
COL6A4P1-201ENST00000446690 PHOX2AO14813 284 aa7.51□□□□□ -1.21
COL6A4P1-201ENST00000446690 FAM3BP58499 235 aaPredicted RBP7.51□□□□□ -1.21
COL6A4P1-201ENST00000446690 SRSF1Q07955 248 aaKnown RBP eCLIP7.51□□□□□ -1.21
COL6A4P1-201ENST00000446690 FXYD5Q96DB9 178 aa7.51□□□□□ -1.21
COL6A4P1-201ENST00000446690 SFRP2Q96HF1 295 aa7.51□□□□□ -1.21
COL6A4P1-201ENST00000446690 NOL4LQ96MY1 436 aaPredicted RBP7.51□□□□□ -1.21
COL6A4P1-201ENST00000446690 HSPB9Q9BQS6 159 aa7.51□□□□□ -1.21
COL6A4P1-201ENST00000446690 NDUFAF3Q9BU61 184 aa7.51□□□□□ -1.21
COL6A4P1-201ENST00000446690 TMUB1Q9BVT8 246 aa7.51□□□□□ -1.21
COL6A4P1-201ENST00000446690 HIGD1AQ9Y241 93 aa7.51□□□□□ -1.21
COL6A4P1-201ENST00000446690 WNK2Q9Y3S1 2297 aa7.51□□□□□ -1.21
COL6A4P1-201ENST00000446690 NPIPB5A8MRT5 1133 aa7.51□□□□□ -1.21
COL6A4P1-201ENST00000446690 EREGO14944 169 aa7.51□□□□□ -1.21
COL6A4P1-201ENST00000446690 GNG7O60262 68 aa7.51□□□□□ -1.21
COL6A4P1-201ENST00000446690 OR2J3O76001 311 aa7.51□□□□□ -1.21
COL6A4P1-201ENST00000446690 IGKV1-17P01599 117 aa7.51□□□□□ -1.21
COL6A4P1-201ENST00000446690 PFN1P07737 140 aaKnown RBP7.51□□□□□ -1.21
COL6A4P1-201ENST00000446690 GNG4P50150 75 aa7.51□□□□□ -1.21
COL6A4P1-201ENST00000446690 JOSD1Q15040 202 aaPredicted RBP7.51□□□□□ -1.21
COL6A4P1-201ENST00000446690 ECSCRQ19T08 205 aa7.51□□□□□ -1.21
COL6A4P1-201ENST00000446690 Q56UQ5 140 aa7.51□□□□□ -1.21
COL6A4P1-201ENST00000446690 TMEM219Q86XT9 240 aa7.51□□□□□ -1.21
COL6A4P1-201ENST00000446690 ZNF664Q8N3J9 261 aa7.51□□□□□ -1.21
COL6A4P1-201ENST00000446690 TTC9CQ8N5M4 171 aa7.51□□□□□ -1.21
COL6A4P1-201ENST00000446690 C11orf52Q96A22 123 aa7.51□□□□□ -1.21
COL6A4P1-201ENST00000446690 FANCD2OSQ96PS1 177 aa7.51□□□□□ -1.21
COL6A4P1-201ENST00000446690 C7orf69Q9H7B7 122 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms