RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 C1QCP02747 245 aa7.05□□□□□ -1.28
PTPN3-204ENST00000446349 LYPD3O95274 346 aa7.05□□□□□ -1.28
PTPN3-204ENST00000446349 TYMSP04818 313 aa7.05□□□□□ -1.28
PTPN3-204ENST00000446349 LYZL4Q96KX0 146 aa7.05□□□□□ -1.28
PTPN3-204ENST00000446349 TGIF2-C20orf24A0A0A6YYL0 155 aa7.05□□□□□ -1.28
PTPN3-204ENST00000446349 IGHV3-35A0A0C4DH35 117 aa7.05□□□□□ -1.28
PTPN3-204ENST00000446349 FHITP49789 147 aa7.05□□□□□ -1.28
PTPN3-204ENST00000446349 Q0VFX4 171 aa7.05□□□□□ -1.28
PTPN3-204ENST00000446349 SPATA45Q537H7 98 aa7.05□□□□□ -1.28
PTPN3-204ENST00000446349 DEFB121Q5J5C9 76 aa7.05□□□□□ -1.28
PTPN3-204ENST00000446349 DMRTA2Q96SC8 542 aa7.05□□□□□ -1.28
PTPN3-204ENST00000446349 SDHCQ99643 169 aaPredicted RBP7.05□□□□□ -1.28
PTPN3-204ENST00000446349 AURKAIP1Q9NWT8 199 aaPredicted RBP7.05□□□□□ -1.28
PTPN3-204ENST00000446349 COL4A6Q14031 1691 aa7.05□□□□□ -1.28
PTPN3-204ENST00000446349 CEACAM8P31997 349 aaPredicted RBP7.04□□□□□ -1.28
PTPN3-204ENST00000446349 RGP1Q92546 391 aaPredicted RBP7.04□□□□□ -1.28
PTPN3-204ENST00000446349 ZMAT4Q9H898 229 aa7.04□□□□□ -1.28
PTPN3-204ENST00000446349 DAZ1Q9NQZ3 744 aaKnown RBP7.04□□□□□ -1.28
PTPN3-204ENST00000446349 DENND4CQ5VZ89 1909 aa7.04□□□□□ -1.28
PTPN3-204ENST00000446349 TRAV9-2A0A087WT02 112 aa7.04□□□□□ -1.28
PTPN3-204ENST00000446349 C7orf71A4D174 169 aa7.04□□□□□ -1.28
PTPN3-204ENST00000446349 J3QRE1 110 aa7.04□□□□□ -1.28
PTPN3-204ENST00000446349 PSG8Q9UQ74 426 aa7.04□□□□□ -1.28
PTPN3-204ENST00000446349 PSCAO43653 123 aa7.04□□□□□ -1.28
PTPN3-204ENST00000446349 ZNF138P52744 262 aa7.04□□□□□ -1.28
PTPN3-204ENST00000446349 B3GALT5-AS1P59052 145 aa7.04□□□□□ -1.28
PTPN3-204ENST00000446349 FAM90A2PQ658T7 463 aa7.04□□□□□ -1.28
PTPN3-204ENST00000446349 SMPXQ9UHP9 88 aa7.04□□□□□ -1.28
PTPN3-204ENST00000446349 F11RQ9Y624 299 aaKnown RBP7.04□□□□□ -1.28
PTPN3-204ENST00000446349 TOMM40O96008 361 aa7.04□□□□□ -1.28
PTPN3-204ENST00000446349 EMP1P54849 157 aa7.04□□□□□ -1.28
PTPN3-204ENST00000446349 PRR32B1ATL7 298 aa7.04□□□□□ -1.28
PTPN3-204ENST00000446349 H2BFSP57053 126 aa7.04□□□□□ -1.28
PTPN3-204ENST00000446349 IGHV3-49A0A0A0MS15 119 aa7.04□□□□□ -1.28
PTPN3-204ENST00000446349 IGHV3-66A0A0C4DH42 116 aa7.04□□□□□ -1.28
PTPN3-204ENST00000446349 H3BUA1 57 aa7.04□□□□□ -1.28
PTPN3-204ENST00000446349 TRAV8-6A0A0B4J262 113 aa7.03□□□□□ -1.28
PTPN3-204ENST00000446349 RHODO00212 210 aa7.03□□□□□ -1.28
PTPN3-204ENST00000446349 TMEM50AO95807 157 aa7.03□□□□□ -1.28
PTPN3-204ENST00000446349 CD55P08174 381 aa7.03□□□□□ -1.28
PTPN3-204ENST00000446349 PLNP26678 52 aa7.03□□□□□ -1.28
PTPN3-204ENST00000446349 BPESC1Q9GZL8 116 aa7.03□□□□□ -1.28
PTPN3-204ENST00000446349 IGHV1-69DA0A0B4J2H0 117 aa7.03□□□□□ -1.28
PTPN3-204ENST00000446349 PSPNO60542 156 aa7.03□□□□□ -1.28
PTPN3-204ENST00000446349 IGHV1-69P01742 117 aa7.03□□□□□ -1.28
PTPN3-204ENST00000446349 OTX1P32242 354 aaPredicted RBP7.03□□□□□ -1.28
PTPN3-204ENST00000446349 SLAQ13239 276 aa7.03□□□□□ -1.28
PTPN3-204ENST00000446349 GAFA1Q96PS6 74 aa7.03□□□□□ -1.28
PTPN3-204ENST00000446349 TTC9CQ8N5M4 171 aa7.03□□□□□ -1.28
PTPN3-204ENST00000446349 RCHY1Q96PM5 261 aa7.03□□□□□ -1.28
PTPN3-204ENST00000446349 OVOL2Q9BRP0 275 aa7.03□□□□□ -1.28
PTPN3-204ENST00000446349 TRBV7-9A0A0J9YWB2 115 aa7.03□□□□□ -1.28
PTPN3-204ENST00000446349 E7EQL1 145 aa7.03□□□□□ -1.28
PTPN3-204ENST00000446349 H0YJW9 148 aa7.03□□□□□ -1.28
PTPN3-204ENST00000446349 ID3Q02535 119 aa7.03□□□□□ -1.28
PTPN3-204ENST00000446349 TEX48A0A1B0GUV7 120 aa7.03□□□□□ -1.28
PTPN3-204ENST00000446349 IGHV3-48P01763 117 aa7.03□□□□□ -1.28
PTPN3-204ENST00000446349 SIGLEC9Q9Y336 463 aa7.03□□□□□ -1.28
PTPN3-204ENST00000446349 SMIM13P0DJ93 91 aa7.03□□□□□ -1.28
PTPN3-204ENST00000446349 SRSF2Q01130 221 aaKnown RBP7.03□□□□□ -1.28
PTPN3-204ENST00000446349 C1orf122Q6ZSJ8 110 aa7.03□□□□□ -1.28
PTPN3-204ENST00000446349 IGHV2-70DA0A0C4DH43 119 aa7.02□□□□□ -1.28
PTPN3-204ENST00000446349 GAGE10A6NGK3 116 aa7.02□□□□□ -1.28
PTPN3-204ENST00000446349 CKS1BP61024 79 aa7.02□□□□□ -1.28
PTPN3-204ENST00000446349 ZNF562Q6V9R5 426 aa7.02□□□□□ -1.28
PTPN3-204ENST00000446349 LCNL1Q6ZST4 164 aa7.02□□□□□ -1.28
PTPN3-204ENST00000446349 SLC25A2Q9BXI2 301 aa7.02□□□□□ -1.28
PTPN3-204ENST00000446349 WDR83OSQ9Y284 106 aa7.02□□□□□ -1.28
PTPN3-204ENST00000446349 ETV2O00321 342 aaPredicted RBP7.02□□□□□ -1.29
PTPN3-204ENST00000446349 SAA4P35542 130 aa7.02□□□□□ -1.29
PTPN3-204ENST00000446349 CBLN2Q8IUK8 224 aa7.02□□□□□ -1.29
PTPN3-204ENST00000446349 KLK15Q9H2R5 256 aa7.02□□□□□ -1.29
PTPN3-204ENST00000446349 IGHV3OR16-13A0A075B7E8 117 aa7.02□□□□□ -1.29
PTPN3-204ENST00000446349 IGHV3-74A0A0B4J1X5 117 aa7.02□□□□□ -1.29
PTPN3-204ENST00000446349 IFITM2Q01629 132 aa7.02□□□□□ -1.29
PTPN3-204ENST00000446349 C1orf194Q5T5A4 169 aa7.02□□□□□ -1.29
PTPN3-204ENST00000446349 TMEM160Q9NX00 188 aa7.02□□□□□ -1.29
PTPN3-204ENST00000446349 IGKV1-9A0A0C4DH69 117 aa7.02□□□□□ -1.29
PTPN3-204ENST00000446349 LINC01619G3V211 115 aa7.02□□□□□ -1.29
PTPN3-204ENST00000446349 EGR1P18146 543 aa7.02□□□□□ -1.29
PTPN3-204ENST00000446349 TFF3Q07654 80 aa7.02□□□□□ -1.29
PTPN3-204ENST00000446349 ZNF474Q6S9Z5 364 aaPredicted RBP7.02□□□□□ -1.29
PTPN3-204ENST00000446349 CHCHD5Q9BSY4 110 aa7.02□□□□□ -1.29
PTPN3-204ENST00000446349 DPH3P1Q9H4G8 78 aa7.02□□□□□ -1.29
PTPN3-204ENST00000446349 MED12Q93074 2177 aa7.02□□□□□ -1.29
PTPN3-204ENST00000446349 CHCHD1Q96BP2 118 aaKnown RBP7.02□□□□□ -1.29
PTPN3-204ENST00000446349 Q96MF0 132 aa7.02□□□□□ -1.29
PTPN3-204ENST00000446349 SEPSECSQ9HD40 501 aaKnown RBP7.02□□□□□ -1.29
PTPN3-204ENST00000446349 NAPSAO96009 420 aa7.02□□□□□ -1.29
PTPN3-204ENST00000446349 MIR17HGQ75NE6 70 aa7.02□□□□□ -1.29
PTPN3-204ENST00000446349 PHLDA1Q8WV24 401 aaPredicted RBP7.02□□□□□ -1.29
PTPN3-204ENST00000446349 DPRXA6NFQ7 191 aa7.02□□□□□ -1.29
PTPN3-204ENST00000446349 HIGD1CA8MV81 97 aa7.02□□□□□ -1.29
PTPN3-204ENST00000446349 TRGC2P03986 189 aa7.02□□□□□ -1.29
PTPN3-204ENST00000446349 LAMTOR2Q9Y2Q5 125 aa7.02□□□□□ -1.29
PTPN3-204ENST00000446349 C1QL1O75973 258 aa7.01□□□□□ -1.29
PTPN3-204ENST00000446349 IL17RELQ6ZVW7 336 aa7.01□□□□□ -1.29
PTPN3-204ENST00000446349 GPHA2Q96T91 129 aa7.01□□□□□ -1.29
PTPN3-204ENST00000446349 SLC25A39Q9BZJ4 359 aaPredicted RBP7.01□□□□□ -1.29
PTPN3-204ENST00000446349 PKDREJQ9NTG1 2253 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms