RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 SPACA3Q8IXA5 215 aa6.54□□□□□ -1.36
SMG1-202ENST00000446231 LSM4Q9Y4Z0 139 aaKnown RBP6.54□□□□□ -1.36
SMG1-202ENST00000446231 V9GYV3 84 aa6.54□□□□□ -1.36
SMG1-202ENST00000446231 TCF20Q9UGU0 1960 aaKnown RBP6.54□□□□□ -1.36
SMG1-202ENST00000446231 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.54□□□□□ -1.36
SMG1-202ENST00000446231 ZNF329Q86UD4 541 aa6.54□□□□□ -1.36
SMG1-202ENST00000446231 ZFP36L1Q07352 338 aaKnown RBP6.54□□□□□ -1.36
SMG1-202ENST00000446231 SS18L2Q9UHA2 77 aa6.54□□□□□ -1.36
SMG1-202ENST00000446231 TAX1BP3O14907 124 aa6.54□□□□□ -1.36
SMG1-202ENST00000446231 NKX2-8O15522 239 aa6.54□□□□□ -1.36
SMG1-202ENST00000446231 RPL27AP46776 148 aaKnown RBP6.54□□□□□ -1.36
SMG1-202ENST00000446231 OR4C13Q8NGP0 309 aa6.54□□□□□ -1.36
SMG1-202ENST00000446231 CGB1A6NKQ9 187 aa6.54□□□□□ -1.36
SMG1-202ENST00000446231 CRYGSP22914 178 aa6.54□□□□□ -1.36
SMG1-202ENST00000446231 SSPNQ14714 243 aa6.54□□□□□ -1.36
SMG1-202ENST00000446231 C3AR1Q16581 482 aa6.54□□□□□ -1.36
SMG1-202ENST00000446231 C1orf147Q96MC9 270 aaPredicted RBP6.54□□□□□ -1.36
SMG1-202ENST00000446231 MOSP00540 346 aa6.53□□□□□ -1.36
SMG1-202ENST00000446231 PYYP10082 97 aa6.53□□□□□ -1.36
SMG1-202ENST00000446231 GUSBP11Q6P575 273 aa6.53□□□□□ -1.36
SMG1-202ENST00000446231 ACP7Q6ZNF0 438 aa6.53□□□□□ -1.36
SMG1-202ENST00000446231 OR4A5Q8NH83 315 aa6.53□□□□□ -1.36
SMG1-202ENST00000446231 ONECUT1Q9UBC0 465 aa6.53□□□□□ -1.36
SMG1-202ENST00000446231 ANKRD11Q6UB99 2663 aaPredicted RBP6.53□□□□□ -1.36
SMG1-202ENST00000446231 TGFAP01135 160 aa6.53□□□□□ -1.36
SMG1-202ENST00000446231 PAX9P55771 341 aa6.53□□□□□ -1.36
SMG1-202ENST00000446231 MRPL20Q9BYC9 149 aaKnown RBP6.53□□□□□ -1.36
SMG1-202ENST00000446231 CCL17Q92583 94 aa6.53□□□□□ -1.36
SMG1-202ENST00000446231 UPK2O00526 184 aa6.53□□□□□ -1.36
SMG1-202ENST00000446231 Q6P435 159 aa6.53□□□□□ -1.36
SMG1-202ENST00000446231 TMEM8BA6NDV4 472 aa6.53□□□□□ -1.36
SMG1-202ENST00000446231 CCL11P51671 97 aa6.53□□□□□ -1.36
SMG1-202ENST00000446231 KLRB1Q12918 225 aa6.53□□□□□ -1.36
SMG1-202ENST00000446231 SAP30O75446 220 aa6.53□□□□□ -1.36
SMG1-202ENST00000446231 IGKV1D-33P01593 117 aa6.53□□□□□ -1.36
SMG1-202ENST00000446231 IGKV1-33P01594 117 aa6.53□□□□□ -1.36
SMG1-202ENST00000446231 SRSF1Q07955 248 aaKnown RBP eCLIP6.53□□□□□ -1.36
SMG1-202ENST00000446231 SBF1O95248 1867 aa6.53□□□□□ -1.36
SMG1-202ENST00000446231 IDI2-AS1Q9NZ38 188 aa6.53□□□□□ -1.36
SMG1-202ENST00000446231 NXT2Q9NPJ8 142 aaKnown RBP6.53□□□□□ -1.36
SMG1-202ENST00000446231 TRBV20OR9-2A0A075B6H5 130 aa6.53□□□□□ -1.36
SMG1-202ENST00000446231 SSBP2P81877 361 aaPredicted RBP6.53□□□□□ -1.36
SMG1-202ENST00000446231 TMEM30BQ3MIR4 351 aa6.53□□□□□ -1.36
SMG1-202ENST00000446231 PLAURQ03405 335 aa6.53□□□□□ -1.36
SMG1-202ENST00000446231 COPS9Q8WXC6 57 aa6.53□□□□□ -1.36
SMG1-202ENST00000446231 ADAMTSL1Q8N6G6 1762 aa6.53□□□□□ -1.36
SMG1-202ENST00000446231 GAGE5Q13069 117 aa6.53□□□□□ -1.36
SMG1-202ENST00000446231 GAGE6Q13070 117 aa6.53□□□□□ -1.36
SMG1-202ENST00000446231 LAGE3Q14657 143 aa6.53□□□□□ -1.36
SMG1-202ENST00000446231 MUC4Q99102 2169 aa6.53□□□□□ -1.36
SMG1-202ENST00000446231 SLC25A53Q5H9E4 307 aa6.52□□□□□ -1.36
SMG1-202ENST00000446231 IGKV1-6A0A0C4DH72 117 aa6.52□□□□□ -1.37
SMG1-202ENST00000446231 DLX6P56179 175 aa6.52□□□□□ -1.37
SMG1-202ENST00000446231 LINC00479Q96M42 142 aa6.52□□□□□ -1.37
SMG1-202ENST00000446231 ARID2Q68CP9 1835 aa6.52□□□□□ -1.37
SMG1-202ENST00000446231 NRN1LQ496H8 165 aa6.52□□□□□ -1.37
SMG1-202ENST00000446231 CYYR1Q96J86 154 aa6.52□□□□□ -1.37
SMG1-202ENST00000446231 FOXA2Q9Y261 457 aaPredicted RBP6.52□□□□□ -1.37
SMG1-202ENST00000446231 NDUFB8O95169 186 aa6.52□□□□□ -1.37
SMG1-202ENST00000446231 IGHV4-34P06331 123 aa6.52□□□□□ -1.37
SMG1-202ENST00000446231 IFITM1P13164 125 aa6.52□□□□□ -1.37
SMG1-202ENST00000446231 LPAL2Q16609 132 aa6.52□□□□□ -1.37
SMG1-202ENST00000446231 HELZP42694 1942 aaKnown RBP6.52□□□□□ -1.37
SMG1-202ENST00000446231 Q6ZS52 159 aa6.52□□□□□ -1.37
SMG1-202ENST00000446231 J3KRW8 73 aa6.52□□□□□ -1.37
SMG1-202ENST00000446231 AGFG2O95081 481 aa6.52□□□□□ -1.37
SMG1-202ENST00000446231 IGLC1P0CG04 106 aa6.52□□□□□ -1.37
SMG1-202ENST00000446231 WIPF2Q8TF74 440 aaPredicted RBP6.52□□□□□ -1.37
SMG1-202ENST00000446231 ADIPOQQ15848 244 aa6.52□□□□□ -1.37
SMG1-202ENST00000446231 H0YJW9 148 aa6.52□□□□□ -1.37
SMG1-202ENST00000446231 RAB1CQ92928 201 aa6.52□□□□□ -1.37
SMG1-202ENST00000446231 PHLDA3Q9Y5J5 127 aa6.52□□□□□ -1.37
SMG1-202ENST00000446231 CHCHD2Q9Y6H1 151 aaPredicted RBP6.52□□□□□ -1.37
SMG1-202ENST00000446231 SP9P0CG40 484 aa6.52□□□□□ -1.37
SMG1-202ENST00000446231 PLNP26678 52 aa6.52□□□□□ -1.37
SMG1-202ENST00000446231 STRCP1A6NGW2 1772 aa6.51□□□□□ -1.37
SMG1-202ENST00000446231 FOXI3A8MTJ6 420 aaPredicted RBP6.51□□□□□ -1.37
SMG1-202ENST00000446231 EFNA2O43921 213 aa6.51□□□□□ -1.37
SMG1-202ENST00000446231 KLF14Q8TD94 323 aaPredicted RBP6.51□□□□□ -1.37
SMG1-202ENST00000446231 CHAC1Q9BUX1 264 aa6.51□□□□□ -1.37
SMG1-202ENST00000446231 WNT9BO14905 357 aa6.51□□□□□ -1.37
SMG1-202ENST00000446231 CIRBPQ14011 172 aaKnown RBP6.51□□□□□ -1.37
SMG1-202ENST00000446231 IGHV5-10-1A0A0J9YXX1 117 aa6.51□□□□□ -1.37
SMG1-202ENST00000446231 TMEM95Q3KNT9 176 aa6.51□□□□□ -1.37
SMG1-202ENST00000446231 ERG28Q9UKR5 140 aa6.51□□□□□ -1.37
SMG1-202ENST00000446231 CT83Q5H943 113 aa6.51□□□□□ -1.37
SMG1-202ENST00000446231 FGFBP3Q8TAT2 258 aa6.51□□□□□ -1.37
SMG1-202ENST00000446231 JPT1Q9UK76 154 aa6.51□□□□□ -1.37
SMG1-202ENST00000446231 CHTOPQ9Y3Y2 248 aaKnown RBP6.51□□□□□ -1.37
SMG1-202ENST00000446231 WDR82Q6UXN9 313 aa6.51□□□□□ -1.37
SMG1-202ENST00000446231 RCHY1Q96PM5 261 aa6.51□□□□□ -1.37
SMG1-202ENST00000446231 D6R8Y8 96 aa6.51□□□□□ -1.37
SMG1-202ENST00000446231 LAMTOR5O43504 91 aa6.51□□□□□ -1.37
SMG1-202ENST00000446231 LHFPL4Q7Z7J7 247 aa6.51□□□□□ -1.37
SMG1-202ENST00000446231 USP24Q9UPU5 2620 aa6.51□□□□□ -1.37
SMG1-202ENST00000446231 TRAV3A0A0B4J244 114 aa6.51□□□□□ -1.37
SMG1-202ENST00000446231 EVI2AP22794 236 aa6.51□□□□□ -1.37
SMG1-202ENST00000446231 OR13A1Q8NGR1 328 aa6.51□□□□□ -1.37
SMG1-202ENST00000446231 TRPM7Q96QT4 1865 aa6.51□□□□□ -1.37
SMG1-202ENST00000446231 TMEM155Q4W5P6 130 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 183.2 ms