RNA–Protein interactions for RNA: ENST00000446225.5

MCF2-206, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene MCF2, Length 1,916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-206ENST00000446225 V9GYS6 101 aa4.71□□□□□ -1.66
MCF2-206ENST00000446225 ZNF469Q96JG9 3925 aaPredicted RBP4.71□□□□□ -1.66
MCF2-206ENST00000446225 CELSR1Q9NYQ6 3014 aa4.7□□□□□ -1.66
MCF2-206ENST00000446225 FLNAP21333 2647 aaKnown RBP4.7□□□□□ -1.66
MCF2-206ENST00000446225 BORCS7-ASMTA0A0B4J1R7 106 aa4.7□□□□□ -1.66
MCF2-206ENST00000446225 OR4C45A6NMZ5 311 aa4.7□□□□□ -1.66
MCF2-206ENST00000446225 PFN1P07737 140 aaKnown RBP4.7□□□□□ -1.66
MCF2-206ENST00000446225 OR5G3P0C626 314 aa4.7□□□□□ -1.66
MCF2-206ENST00000446225 PIPP12273 146 aaPredicted RBP4.7□□□□□ -1.66
MCF2-206ENST00000446225 CCL1P22362 96 aa4.7□□□□□ -1.66
MCF2-206ENST00000446225 NANOS2P60321 138 aaKnown RBP4.7□□□□□ -1.66
MCF2-206ENST00000446225 SLC35A2P78381 396 aa4.7□□□□□ -1.66
MCF2-206ENST00000446225 MRPS10P82664 201 aaKnown RBP4.7□□□□□ -1.66
MCF2-206ENST00000446225 ZFP69Q49AA0 526 aa4.7□□□□□ -1.66
MCF2-206ENST00000446225 C1orf194Q5T5A4 169 aa4.7□□□□□ -1.66
MCF2-206ENST00000446225 XAF1Q6GPH4 301 aa4.7□□□□□ -1.66
MCF2-206ENST00000446225 WDR86Q86TI4 376 aa4.7□□□□□ -1.66
MCF2-206ENST00000446225 C11orf53Q8IXP5 236 aa4.7□□□□□ -1.66
MCF2-206ENST00000446225 TMEM252Q8N6L7 170 aa4.7□□□□□ -1.66
MCF2-206ENST00000446225 OR10AC1Q8NH08 325 aa4.7□□□□□ -1.66
MCF2-206ENST00000446225 OR5P3Q8WZ94 311 aa4.7□□□□□ -1.66
MCF2-206ENST00000446225 LINC00477Q96M19 166 aa4.7□□□□□ -1.66
MCF2-206ENST00000446225 ZNF184Q99676 751 aaPredicted RBP4.7□□□□□ -1.66
MCF2-206ENST00000446225 ADAT1Q9BUB4 502 aaKnown RBP4.7□□□□□ -1.66
MCF2-206ENST00000446225 TMEM106BQ9NUM4 274 aa4.7□□□□□ -1.66
MCF2-206ENST00000446225 SCN3BQ9NY72 215 aa4.7□□□□□ -1.66
MCF2-206ENST00000446225 ANXA10Q9UJ72 324 aa4.7□□□□□ -1.66
MCF2-206ENST00000446225 ZNF257Q9Y2Q1 563 aa4.7□□□□□ -1.66
MCF2-206ENST00000446225 F8P00451 2351 aa4.7□□□□□ -1.66
MCF2-206ENST00000446225 IGLV7-46A0A075B6I9 117 aa4.7□□□□□ -1.66
MCF2-206ENST00000446225 MEIKINA0A087WXM9 373 aa4.7□□□□□ -1.66
MCF2-206ENST00000446225 LOC107986453A0A1B0GWG9 222 aa4.7□□□□□ -1.66
MCF2-206ENST00000446225 C20orf202A1L168 122 aa4.7□□□□□ -1.66
MCF2-206ENST00000446225 ZNF253O75346 499 aa4.7□□□□□ -1.66
MCF2-206ENST00000446225 DHRS3O75911 302 aa4.7□□□□□ -1.66
MCF2-206ENST00000446225 KBTBD11O94819 623 aa4.7□□□□□ -1.66
MCF2-206ENST00000446225 DUSP14O95147 198 aaKnown RBP4.7□□□□□ -1.66
MCF2-206ENST00000446225 REG1AP05451 166 aa4.7□□□□□ -1.66
MCF2-206ENST00000446225 SLC25A16P16260 332 aa4.7□□□□□ -1.66
MCF2-206ENST00000446225 MYL9P24844 172 aa4.7□□□□□ -1.66
MCF2-206ENST00000446225 PKIAP61925 76 aa4.7□□□□□ -1.66
MCF2-206ENST00000446225 LOXL1Q08397 574 aaPredicted RBP4.7□□□□□ -1.66
MCF2-206ENST00000446225 PRR4Q16378 134 aa4.7□□□□□ -1.66
MCF2-206ENST00000446225 LTC4SQ16873 150 aa4.7□□□□□ -1.66
MCF2-206ENST00000446225 CDNFQ49AH0 187 aa4.7□□□□□ -1.66
MCF2-206ENST00000446225 OCIAD2Q56VL3 154 aa4.7□□□□□ -1.66
MCF2-206ENST00000446225 FAM201AQ5SY85 155 aa4.7□□□□□ -1.66
MCF2-206ENST00000446225 ZNF826PQ6ZT77 177 aa4.7□□□□□ -1.66
MCF2-206ENST00000446225 FAM24BQ8N5W8 94 aa4.7□□□□□ -1.66
MCF2-206ENST00000446225 NKAPP1Q8N9T2 125 aa4.7□□□□□ -1.66
MCF2-206ENST00000446225 OR51A4Q8NGJ6 313 aa4.7□□□□□ -1.66
MCF2-206ENST00000446225 OR51A2Q8NGJ7 313 aa4.7□□□□□ -1.66
MCF2-206ENST00000446225 OR10J6PQ8NGY7 276 aa4.7□□□□□ -1.66
MCF2-206ENST00000446225 OR8S1Q8NH09 359 aa4.7□□□□□ -1.66
MCF2-206ENST00000446225 SFT2D1Q8WV19 159 aa4.7□□□□□ -1.66
MCF2-206ENST00000446225 SUCNR1Q9BXA5 334 aa4.7□□□□□ -1.66
MCF2-206ENST00000446225 DUSP21Q9H596 190 aa4.7□□□□□ -1.66
MCF2-206ENST00000446225 PRNDQ9UKY0 176 aa4.7□□□□□ -1.66
MCF2-206ENST00000446225 NOP16Q9Y3C1 178 aaKnown RBP4.7□□□□□ -1.66
MCF2-206ENST00000446225 TPRKBQ9Y3C4 175 aa4.7□□□□□ -1.66
MCF2-206ENST00000446225 MPC1Q9Y5U8 109 aa4.7□□□□□ -1.66
MCF2-206ENST00000446225 TEP1Q99973 2627 aaKnown RBP4.69□□□□□ -1.66
MCF2-206ENST00000446225 A0A0U1RQV1 116 aa4.69□□□□□ -1.66
MCF2-206ENST00000446225 CLDN25C9JDP6 229 aa4.69□□□□□ -1.66
MCF2-206ENST00000446225 ZNF780AO75290 641 aaPredicted RBP4.69□□□□□ -1.66
MCF2-206ENST00000446225 LY6G6DO95868 133 aa4.69□□□□□ -1.66
MCF2-206ENST00000446225 NRASP01111 189 aa4.69□□□□□ -1.66
MCF2-206ENST00000446225 FSHBP01225 129 aa4.69□□□□□ -1.66
MCF2-206ENST00000446225 PGAM2P15259 253 aa4.69□□□□□ -1.66
MCF2-206ENST00000446225 CRHBPP24387 322 aa4.69□□□□□ -1.66
MCF2-206ENST00000446225 KRTAP10-2P60368 255 aa4.69□□□□□ -1.66
MCF2-206ENST00000446225 RPS28P62857 69 aaKnown RBP4.69□□□□□ -1.66
MCF2-206ENST00000446225 LCE3BQ5TA77 95 aa4.69□□□□□ -1.66
MCF2-206ENST00000446225 TMEM244Q5VVB8 128 aa4.69□□□□□ -1.66
MCF2-206ENST00000446225 RPL22L1Q6P5R6 122 aaKnown RBP4.69□□□□□ -1.66
MCF2-206ENST00000446225 NEGR1Q7Z3B1 354 aa4.69□□□□□ -1.66
MCF2-206ENST00000446225 NOTCH2NLQ7Z3S9 236 aa4.69□□□□□ -1.66
MCF2-206ENST00000446225 OR5AK2Q8NH90 309 aa4.69□□□□□ -1.66
MCF2-206ENST00000446225 ADAT3Q96EY9 351 aaPredicted RBP4.69□□□□□ -1.66
MCF2-206ENST00000446225 FAAP24Q9BTP7 215 aa4.69□□□□□ -1.66
MCF2-206ENST00000446225 LYRM2Q9NU23 88 aaPredicted RBP4.69□□□□□ -1.66
MCF2-206ENST00000446225 MTFP1Q9UDX5 166 aa4.69□□□□□ -1.66
MCF2-206ENST00000446225 U3KQ87 197 aa4.69□□□□□ -1.66
MCF2-206ENST00000446225 MED13LQ71F56 2210 aa4.69□□□□□ -1.66
MCF2-206ENST00000446225 CSPG4Q6UVK1 2322 aa4.69□□□□□ -1.66
MCF2-206ENST00000446225 TMEM189A5PLL7 270 aa4.68□□□□□ -1.66
MCF2-206ENST00000446225 F6UZH7 168 aa4.68□□□□□ -1.66
MCF2-206ENST00000446225 SOCS3O14543 225 aa4.68□□□□□ -1.66
MCF2-206ENST00000446225 CDS2O95674 445 aa4.68□□□□□ -1.66
MCF2-206ENST00000446225 IFNA17P01571 189 aa4.68□□□□□ -1.66
MCF2-206ENST00000446225 APOA2P02652 100 aa4.68□□□□□ -1.66
MCF2-206ENST00000446225 MYCNOSP40205 109 aa4.68□□□□□ -1.66
MCF2-206ENST00000446225 TAS2R19P59542 299 aa4.68□□□□□ -1.66
MCF2-206ENST00000446225 KRTAP1-1Q07627 177 aa4.68□□□□□ -1.66
MCF2-206ENST00000446225 KIAA0087Q14695 138 aa4.68□□□□□ -1.66
MCF2-206ENST00000446225 CDK5R1Q15078 307 aa4.68□□□□□ -1.66
MCF2-206ENST00000446225 NEDD8Q15843 81 aa4.68□□□□□ -1.66
MCF2-206ENST00000446225 GDPD1Q8N9F7 314 aa4.68□□□□□ -1.66
MCF2-206ENST00000446225 DEFB108BQ8NET1 73 aa4.68□□□□□ -1.66
MCF2-206ENST00000446225 OR5A2Q8NGI9 324 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms