RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 LRRC37A2A6NM11 1700 aa2.52□□□□□ -2.01
HMGB1P48-201ENST00000446155 TRAV9-1A0A075B6T8 112 aa2.52□□□□□ -2.01
HMGB1P48-201ENST00000446155 A0A1B0GU33 70 aa2.52□□□□□ -2.01
HMGB1P48-201ENST00000446155 LOC105371267A0A1B0GV96 52 aa2.52□□□□□ -2.01
HMGB1P48-201ENST00000446155 GGTLC3B5MD39 225 aa2.52□□□□□ -2.01
HMGB1P48-201ENST00000446155 SMIM10L2AP0DMW4 78 aa2.52□□□□□ -2.01
HMGB1P48-201ENST00000446155 SMIM10L2BP0DMW5 78 aa2.52□□□□□ -2.01
HMGB1P48-201ENST00000446155 PPIBP23284 216 aaKnown RBP2.52□□□□□ -2.01
HMGB1P48-201ENST00000446155 S100A7P31151 101 aa2.52□□□□□ -2.01
HMGB1P48-201ENST00000446155 LPAR6P43657 344 aa2.52□□□□□ -2.01
HMGB1P48-201ENST00000446155 TAS2R30P59541 319 aa2.52□□□□□ -2.01
HMGB1P48-201ENST00000446155 TAS2R20P59543 309 aa2.52□□□□□ -2.01
HMGB1P48-201ENST00000446155 HTR4Q13639 388 aa2.52□□□□□ -2.01
HMGB1P48-201ENST00000446155 ALX1Q15699 326 aa2.52□□□□□ -2.01
HMGB1P48-201ENST00000446155 MOGQ16653 247 aa2.52□□□□□ -2.01
HMGB1P48-201ENST00000446155 KRTAP25-1Q3LHN0 102 aa2.52□□□□□ -2.01
HMGB1P48-201ENST00000446155 AKR1C8PQ5T2L2 129 aa2.52□□□□□ -2.01
HMGB1P48-201ENST00000446155 NOXRED1Q6NXP6 359 aa2.52□□□□□ -2.01
HMGB1P48-201ENST00000446155 LYPD6Q86Y78 171 aa2.52□□□□□ -2.01
HMGB1P48-201ENST00000446155 EIF4E3Q8N5X7 224 aaKnown RBP2.52□□□□□ -2.01
HMGB1P48-201ENST00000446155 Q8NAQ8 132 aa2.52□□□□□ -2.01
HMGB1P48-201ENST00000446155 OR10P1Q8NGE3 313 aa2.52□□□□□ -2.01
HMGB1P48-201ENST00000446155 PYDC1Q8WXC3 89 aa2.52□□□□□ -2.01
HMGB1P48-201ENST00000446155 SLC7A6Q92536 515 aa2.52□□□□□ -2.01
HMGB1P48-201ENST00000446155 GPR146Q96CH1 333 aa2.52□□□□□ -2.01
HMGB1P48-201ENST00000446155 MIXL1Q9H2W2 232 aa2.52□□□□□ -2.01
HMGB1P48-201ENST00000446155 C19orf12Q9NSK7 152 aa2.52□□□□□ -2.01
HMGB1P48-201ENST00000446155 ASF1BQ9NVP2 202 aa2.52□□□□□ -2.01
HMGB1P48-201ENST00000446155 PRNDQ9UKY0 176 aa2.52□□□□□ -2.01
HMGB1P48-201ENST00000446155 MCTS1Q9ULC4 181 aaKnown RBP2.52□□□□□ -2.01
HMGB1P48-201ENST00000446155 UBR2Q8IWV8 1755 aa2.51□□□□□ -2.01
HMGB1P48-201ENST00000446155 ATG2BQ96BY7 2078 aa2.51□□□□□ -2.01
HMGB1P48-201ENST00000446155 DPRXA6NFQ7 191 aa2.51□□□□□ -2.01
HMGB1P48-201ENST00000446155 C17orf98A8MV24 154 aa2.51□□□□□ -2.01
HMGB1P48-201ENST00000446155 G3V2T6 193 aa2.51□□□□□ -2.01
HMGB1P48-201ENST00000446155 GPR31O00270 319 aa2.51□□□□□ -2.01
HMGB1P48-201ENST00000446155 MFSD11O43934 449 aa2.51□□□□□ -2.01
HMGB1P48-201ENST00000446155 SOD1P00441 154 aa2.51□□□□□ -2.01
HMGB1P48-201ENST00000446155 SMIM17P0DL12 118 aa2.51□□□□□ -2.01
HMGB1P48-201ENST00000446155 PHBP35232 272 aa2.51□□□□□ -2.01
HMGB1P48-201ENST00000446155 CSN1S1P47710 185 aa2.51□□□□□ -2.01
HMGB1P48-201ENST00000446155 DEFA3P59666 94 aa2.51□□□□□ -2.01
HMGB1P48-201ENST00000446155 GNG5P63218 68 aa2.51□□□□□ -2.01
HMGB1P48-201ENST00000446155 CCL20P78556 96 aa2.51□□□□□ -2.01
HMGB1P48-201ENST00000446155 FAM229BQ4G0N7 80 aa2.51□□□□□ -2.01
HMGB1P48-201ENST00000446155 FKBP1CQ5VVH2 108 aa2.51□□□□□ -2.01
HMGB1P48-201ENST00000446155 RNF182Q8N6D2 247 aa2.51□□□□□ -2.01
HMGB1P48-201ENST00000446155 TOMM6Q96B49 74 aa2.51□□□□□ -2.01
HMGB1P48-201ENST00000446155 DUSP21Q9H596 190 aa2.51□□□□□ -2.01
HMGB1P48-201ENST00000446155 LYRM2Q9NU23 88 aaPredicted RBP2.51□□□□□ -2.01
HMGB1P48-201ENST00000446155 FUT9Q9Y231 359 aa2.51□□□□□ -2.01
HMGB1P48-201ENST00000446155 CYSLTR1Q9Y271 337 aa2.51□□□□□ -2.01
HMGB1P48-201ENST00000446155 SLC35A3Q9Y2D2 325 aa2.51□□□□□ -2.01
HMGB1P48-201ENST00000446155 NDUFAF1Q9Y375 327 aa2.51□□□□□ -2.01
HMGB1P48-201ENST00000446155 FBN3Q75N90 2809 aa2.51□□□□□ -2.01
HMGB1P48-201ENST00000446155 RALGAPA2Q2PPJ7 1873 aa2.51□□□□□ -2.01
HMGB1P48-201ENST00000446155 LTBP2Q14767 1821 aa2.51□□□□□ -2.01
HMGB1P48-201ENST00000446155 FBN2P35556 2912 aa2.51□□□□□ -2.01
HMGB1P48-201ENST00000446155 AKAP13Q12802 2813 aa2.5□□□□□ -2.01
HMGB1P48-201ENST00000446155 PLXNA3P51805 1871 aa2.5□□□□□ -2.01
HMGB1P48-201ENST00000446155 IGLV2-18A0A075B6J9 118 aa2.5□□□□□ -2.01
HMGB1P48-201ENST00000446155 SPRR5A0A1B0GTR4 108 aa2.5□□□□□ -2.01
HMGB1P48-201ENST00000446155 LRCOL1A6NCL2 159 aa2.5□□□□□ -2.01
HMGB1P48-201ENST00000446155 UBFD1O14562 309 aaKnown RBP2.5□□□□□ -2.01
HMGB1P48-201ENST00000446155 NDUFC2O95298 119 aa2.5□□□□□ -2.01
HMGB1P48-201ENST00000446155 PRM2P04554 102 aa2.5□□□□□ -2.01
HMGB1P48-201ENST00000446155 CRHP06850 196 aa2.5□□□□□ -2.01
HMGB1P48-201ENST00000446155 ZNF22P17026 224 aaPredicted RBP2.5□□□□□ -2.01
HMGB1P48-201ENST00000446155 SPI1P17947 270 aa2.5□□□□□ -2.01
HMGB1P48-201ENST00000446155 BLVRBP30043 206 aaPredicted RBP2.5□□□□□ -2.01
HMGB1P48-201ENST00000446155 RWDD2BP57060 319 aa2.5□□□□□ -2.01
HMGB1P48-201ENST00000446155 FXYD7P58549 80 aa2.5□□□□□ -2.01
HMGB1P48-201ENST00000446155 NCALDP61601 193 aa2.5□□□□□ -2.01
HMGB1P48-201ENST00000446155 ZNF117Q03924 483 aa2.5□□□□□ -2.01
HMGB1P48-201ENST00000446155 Q6Q795 121 aa2.5□□□□□ -2.01
HMGB1P48-201ENST00000446155 CLDND2Q8NHS1 167 aa2.5□□□□□ -2.01
HMGB1P48-201ENST00000446155 SLC25A40Q8TBP6 338 aa2.5□□□□□ -2.01
HMGB1P48-201ENST00000446155 IGF2BP2-AS1Q96M15 143 aa2.5□□□□□ -2.01
HMGB1P48-201ENST00000446155 TTTY13Q9BZ97 58 aa2.5□□□□□ -2.01
HMGB1P48-201ENST00000446155 SH3BGRL3Q9H299 93 aa2.5□□□□□ -2.01
HMGB1P48-201ENST00000446155 MED29Q9NX70 200 aa2.5□□□□□ -2.01
HMGB1P48-201ENST00000446155 IL36BQ9NZH7 164 aa2.5□□□□□ -2.01
HMGB1P48-201ENST00000446155 HEY1Q9Y5J3 304 aa2.5□□□□□ -2.01
HMGB1P48-201ENST00000446155 R4GN34 69 aa2.5□□□□□ -2.01
HMGB1P48-201ENST00000446155 ASXL3Q9C0F0 2248 aa2.5□□□□□ -2.01
HMGB1P48-201ENST00000446155 COL4A1P02462 1669 aa2.5□□□□□ -2.01
HMGB1P48-201ENST00000446155 SETD2Q9BYW2 2564 aaPredicted RBP2.5□□□□□ -2.01
HMGB1P48-201ENST00000446155 NID2Q14112 1375 aa2.49□□□□□ -2.01
HMGB1P48-201ENST00000446155 LRRC37AA6NMS7 1700 aa2.49□□□□□ -2.01
HMGB1P48-201ENST00000446155 IGKV1D-43A0A0B4J1Z2 117 aa2.49□□□□□ -2.01
HMGB1P48-201ENST00000446155 LOC730098B7Z3J9 87 aa2.49□□□□□ -2.01
HMGB1P48-201ENST00000446155 H7C1C5 153 aa2.49□□□□□ -2.01
HMGB1P48-201ENST00000446155 LGALS1P09382 135 aaKnown RBP2.49□□□□□ -2.01
HMGB1P48-201ENST00000446155 NBEAP1P0C6P0 100 aa2.49□□□□□ -2.01
HMGB1P48-201ENST00000446155 HIST1H2BOP23527 126 aa2.49□□□□□ -2.01
HMGB1P48-201ENST00000446155 HIST1H2BBP33778 126 aa2.49□□□□□ -2.01
HMGB1P48-201ENST00000446155 CD200P41217 278 aa2.49□□□□□ -2.01
HMGB1P48-201ENST00000446155 GABRA4P48169 554 aa2.49□□□□□ -2.01
HMGB1P48-201ENST00000446155 HIST1H2BDP58876 126 aa2.49□□□□□ -2.01
HMGB1P48-201ENST00000446155 RPS11P62280 158 aaKnown RBP eCLIP2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms