RNA–Protein interactions for RNA: ENST00000444508.5

SMARCAL1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 711 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-209ENST00000444508 OR11H12B2RN74 326 aa13.08□□□□□ -0.32
SMARCAL1-209ENST00000444508 HNRNPCP07910 306 aaKnown RBP eCLIP13.08□□□□□ -0.32
SMARCAL1-209ENST00000444508 NHLRC4P0CG21 123 aaPredicted RBP13.08□□□□□ -0.32
SMARCAL1-209ENST00000444508 BCAP31P51572 246 aa13.08□□□□□ -0.32
SMARCAL1-209ENST00000444508 ZNF90Q03938 601 aa13.08□□□□□ -0.32
SMARCAL1-209ENST00000444508 TCF24Q7RTU0 167 aa13.08□□□□□ -0.32
SMARCAL1-209ENST00000444508 THAP8Q8NA92 274 aa13.08□□□□□ -0.32
SMARCAL1-209ENST00000444508 OR10P1Q8NGE3 313 aa13.08□□□□□ -0.32
SMARCAL1-209ENST00000444508 TRGV9Q99603 122 aa13.08□□□□□ -0.32
SMARCAL1-209ENST00000444508 ASCL2Q99929 193 aa13.08□□□□□ -0.32
SMARCAL1-209ENST00000444508 DFFBO76075 338 aa13.07□□□□□ -0.32
SMARCAL1-209ENST00000444508 CAV2P51636 162 aa13.07□□□□□ -0.32
SMARCAL1-209ENST00000444508 RPL11P62913 178 aaKnown RBP13.07□□□□□ -0.32
SMARCAL1-209ENST00000444508 PAFAH1B2P68402 229 aa13.07□□□□□ -0.32
SMARCAL1-209ENST00000444508 USF2Q15853 346 aaPredicted RBP13.07□□□□□ -0.32
SMARCAL1-209ENST00000444508 RNF125Q96EQ8 232 aa13.07□□□□□ -0.32
SMARCAL1-209ENST00000444508 PBDC1Q9BVG4 233 aa13.07□□□□□ -0.32
SMARCAL1-209ENST00000444508 C19orf73Q9NVV2 129 aa13.07□□□□□ -0.32
SMARCAL1-209ENST00000444508 MGAT4CQ9UBM8 478 aa13.07□□□□□ -0.32
SMARCAL1-209ENST00000444508 RABAC1Q9UI14 185 aa13.07□□□□□ -0.32
SMARCAL1-209ENST00000444508 IGKV3-7A0A075B6H7 116 aa13.06□□□□□ -0.32
SMARCAL1-209ENST00000444508 PMS2P5A8MQ11 134 aa13.06□□□□□ -0.32
SMARCAL1-209ENST00000444508 CCNKO75909 580 aa13.06□□□□□ -0.32
SMARCAL1-209ENST00000444508 SIX6O95475 246 aa13.06□□□□□ -0.32
SMARCAL1-209ENST00000444508 NUP62P37198 522 aaPredicted RBP13.06□□□□□ -0.32
SMARCAL1-209ENST00000444508 P2RY1P47900 373 aa13.06□□□□□ -0.32
SMARCAL1-209ENST00000444508 RRAS2P62070 204 aaPredicted RBP13.06□□□□□ -0.32
SMARCAL1-209ENST00000444508 DLK1P80370 383 aa13.06□□□□□ -0.32
SMARCAL1-209ENST00000444508 OR2F1Q13607 317 aa13.06□□□□□ -0.32
SMARCAL1-209ENST00000444508 RAB32Q13637 225 aa13.06□□□□□ -0.32
SMARCAL1-209ENST00000444508 DEFB125Q8N687 156 aa13.06□□□□□ -0.32
SMARCAL1-209ENST00000444508 SRD5A3Q9H8P0 318 aa13.06□□□□□ -0.32
SMARCAL1-209ENST00000444508 PFDN2Q9UHV9 154 aa13.06□□□□□ -0.32
SMARCAL1-209ENST00000444508 IGKV1OR2-108A0A075B7D4 117 aa13.05□□□□□ -0.32
SMARCAL1-209ENST00000444508 CFDP00746 253 aaPredicted RBP13.05□□□□□ -0.32
SMARCAL1-209ENST00000444508 TFPI2P48307 235 aa13.05□□□□□ -0.32
SMARCAL1-209ENST00000444508 EIF2B2P49770 351 aaKnown RBP13.05□□□□□ -0.32
SMARCAL1-209ENST00000444508 LYZP61626 148 aa13.05□□□□□ -0.32
SMARCAL1-209ENST00000444508 CYCSP99999 105 aaKnown RBP13.05□□□□□ -0.32
SMARCAL1-209ENST00000444508 IL15RAQ13261 267 aa13.05□□□□□ -0.32
SMARCAL1-209ENST00000444508 FAM90A2PQ658T7 463 aa13.05□□□□□ -0.32
SMARCAL1-209ENST00000444508 TMEM144Q7Z5S9 345 aa13.05□□□□□ -0.32
SMARCAL1-209ENST00000444508 SBSPONQ8IVN8 264 aa13.05□□□□□ -0.32
SMARCAL1-209ENST00000444508 LILRB2Q8N423 598 aa13.05□□□□□ -0.32
SMARCAL1-209ENST00000444508 NMES1Q9C002 83 aa13.05□□□□□ -0.32
SMARCAL1-209ENST00000444508 WFDC10AQ9H1F0 79 aa13.05□□□□□ -0.32
SMARCAL1-209ENST00000444508 FNDC10F2Z333 226 aa13.04□□□□□ -0.32
SMARCAL1-209ENST00000444508 DNASE2O00115 360 aaPredicted RBP13.04□□□□□ -0.32
SMARCAL1-209ENST00000444508 RLN2P04090 185 aa13.04□□□□□ -0.32
SMARCAL1-209ENST00000444508 GBGT1Q8N5D6 347 aa13.04□□□□□ -0.32
SMARCAL1-209ENST00000444508 BPIFCQ8NFQ6 507 aa13.04□□□□□ -0.32
SMARCAL1-209ENST00000444508 U3KQE9 123 aa13.04□□□□□ -0.32
SMARCAL1-209ENST00000444508 HELTA6NFD8 242 aa13.03□□□□□ -0.32
SMARCAL1-209ENST00000444508 CMC4P56277 68 aaPredicted RBP13.03□□□□□ -0.32
SMARCAL1-209ENST00000444508 GGACTQ9BVM4 153 aa13.03□□□□□ -0.32
SMARCAL1-209ENST00000444508 C11orf1Q9H5F2 150 aa13.03□□□□□ -0.32
SMARCAL1-209ENST00000444508 NPVFQ9HCQ7 196 aa13.03□□□□□ -0.32
SMARCAL1-209ENST00000444508 LYRM2Q9NU23 88 aaPredicted RBP13.03□□□□□ -0.32
SMARCAL1-209ENST00000444508 UBQLN2Q9UHD9 624 aa13.03□□□□□ -0.32
SMARCAL1-209ENST00000444508 FAM24AA6NFZ4 105 aa13.02□□□□□ -0.33
SMARCAL1-209ENST00000444508 DEDDO75618 318 aa13.02□□□□□ -0.33
SMARCAL1-209ENST00000444508 AP2S1P53680 142 aaPredicted RBP13.02□□□□□ -0.33
SMARCAL1-209ENST00000444508 SLC38A11Q08AI6 406 aa13.02□□□□□ -0.33
SMARCAL1-209ENST00000444508 C16orf54Q6UWD8 224 aa13.02□□□□□ -0.33
SMARCAL1-209ENST00000444508 STX12Q86Y82 276 aa13.02□□□□□ -0.33
SMARCAL1-209ENST00000444508 WFDC3Q8IUB2 231 aa13.02□□□□□ -0.33
SMARCAL1-209ENST00000444508 STXBP6Q8NFX7 210 aa13.02□□□□□ -0.33
SMARCAL1-209ENST00000444508 PPP1R14BQ96C90 147 aa13.02□□□□□ -0.33
SMARCAL1-209ENST00000444508 MS4A6AQ9H2W1 248 aa13.02□□□□□ -0.33
SMARCAL1-209ENST00000444508 ALG5Q9Y673 324 aa13.02□□□□□ -0.33
SMARCAL1-209ENST00000444508 TRAV2A0A0B4J234 112 aa13.01□□□□□ -0.33
SMARCAL1-209ENST00000444508 BUB3O43684 328 aa13.01□□□□□ -0.33
SMARCAL1-209ENST00000444508 CST7O76096 145 aa13.01□□□□□ -0.33
SMARCAL1-209ENST00000444508 SULT1A1P50225 295 aa13.01□□□□□ -0.33
SMARCAL1-209ENST00000444508 ARL16Q0P5N6 197 aa13.01□□□□□ -0.33
SMARCAL1-209ENST00000444508 ODF3L2Q3SX64 289 aa13.01□□□□□ -0.33
SMARCAL1-209ENST00000444508 LRRC37A5PQ49AS3 106 aa13.01□□□□□ -0.33
SMARCAL1-209ENST00000444508 TEPPQ6URK8 271 aa13.01□□□□□ -0.33
SMARCAL1-209ENST00000444508 CYP2G1PQ6ZSU1 146 aa13.01□□□□□ -0.33
SMARCAL1-209ENST00000444508 GLMPQ8WWB7 406 aa13.01□□□□□ -0.33
SMARCAL1-209ENST00000444508 FAM110AQ9BQ89 295 aa13.01□□□□□ -0.33
SMARCAL1-209ENST00000444508 ZMAT4Q9H898 229 aa13.01□□□□□ -0.33
SMARCAL1-209ENST00000444508 E5RGE8 158 aa13□□□□□ -0.33
SMARCAL1-209ENST00000444508 GATA2P23769 480 aaPredicted RBP13□□□□□ -0.33
SMARCAL1-209ENST00000444508 S100A7P31151 101 aa13□□□□□ -0.33
SMARCAL1-209ENST00000444508 H2BFSP57053 126 aa13□□□□□ -0.33
SMARCAL1-209ENST00000444508 SELENOTP62341 195 aa13□□□□□ -0.33
SMARCAL1-209ENST00000444508 HBG1P69891 147 aa13□□□□□ -0.33
SMARCAL1-209ENST00000444508 HBG2P69892 147 aa13□□□□□ -0.33
SMARCAL1-209ENST00000444508 HAGHQ16775 308 aa13□□□□□ -0.33
SMARCAL1-209ENST00000444508 RGS21Q2M5E4 152 aa13□□□□□ -0.33
SMARCAL1-209ENST00000444508 TMEM217Q8N7C4 229 aa13□□□□□ -0.33
SMARCAL1-209ENST00000444508 U3KQK5 164 aa13□□□□□ -0.33
SMARCAL1-209ENST00000444508 IGSF23A1L1A6 192 aa12.99□□□□□ -0.33
SMARCAL1-209ENST00000444508 ORM2P19652 201 aa12.99□□□□□ -0.33
SMARCAL1-209ENST00000444508 SIGLEC15Q6ZMC9 328 aa12.99□□□□□ -0.33
SMARCAL1-209ENST00000444508 LINC00322Q6ZN03 302 aaPredicted RBP12.99□□□□□ -0.33
SMARCAL1-209ENST00000444508 TMEM252Q8N6L7 170 aa12.99□□□□□ -0.33
SMARCAL1-209ENST00000444508 FBXL17Q9UF56 701 aa12.99□□□□□ -0.33
SMARCAL1-209ENST00000444508 SLC45A2Q9UMX9 530 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms