RNA–Protein interactions for RNA: ENST00000444475.5

UBR3-206, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 3,821 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-206ENST00000444475 OR8D4Q8NGM9 314 aa2.89□□□□□ -1.95
UBR3-206ENST00000444475 PRSS3P2Q8NHM4 247 aa2.89□□□□□ -1.95
UBR3-206ENST00000444475 FKBP11Q9NYL4 201 aa2.89□□□□□ -1.95
UBR3-206ENST00000444475 INSL5Q9Y5Q6 135 aa2.89□□□□□ -1.95
UBR3-206ENST00000444475 ZNF706Q9Y5V0 76 aaPredicted RBP2.89□□□□□ -1.95
UBR3-206ENST00000444475 EML6Q6ZMW3 1958 aa2.89□□□□□ -1.95
UBR3-206ENST00000444475 CITO14578 2027 aa2.88□□□□□ -1.95
UBR3-206ENST00000444475 MYH4Q9Y623 1939 aa2.88□□□□□ -1.95
UBR3-206ENST00000444475 TRGV10A0A0A0MS01 117 aa2.88□□□□□ -1.95
UBR3-206ENST00000444475 M0R1X1 148 aa2.88□□□□□ -1.95
UBR3-206ENST00000444475 MT-ATP8P03928 68 aa2.88□□□□□ -1.95
UBR3-206ENST00000444475 FGF12P61328 243 aa2.88□□□□□ -1.95
UBR3-206ENST00000444475 S100ZQ8WXG8 99 aa2.88□□□□□ -1.95
UBR3-206ENST00000444475 AGPAT4-IT1Q9H0P7 198 aa2.88□□□□□ -1.95
UBR3-206ENST00000444475 ZNF586Q9NXT0 402 aa2.88□□□□□ -1.95
UBR3-206ENST00000444475 COL3A1P02461 1466 aaPredicted RBP2.88□□□□□ -1.95
UBR3-206ENST00000444475 KIF26AQ9ULI4 1882 aaPredicted RBP2.88□□□□□ -1.95
UBR3-206ENST00000444475 IGHV3-16A0A0C4DH30 117 aa2.88□□□□□ -1.95
UBR3-206ENST00000444475 TMEM262E9PQX1 116 aa2.88□□□□□ -1.95
UBR3-206ENST00000444475 PDCD5O14737 125 aa2.88□□□□□ -1.95
UBR3-206ENST00000444475 GEMIN2O14893 280 aaKnown RBP2.88□□□□□ -1.95
UBR3-206ENST00000444475 PLA2G10O15496 165 aa2.88□□□□□ -1.95
UBR3-206ENST00000444475 COX7A2P2O60397 106 aa2.88□□□□□ -1.95
UBR3-206ENST00000444475 CHTF8P0CG12 524 aa2.88□□□□□ -1.95
UBR3-206ENST00000444475 NFYBP25208 207 aa2.88□□□□□ -1.95
UBR3-206ENST00000444475 CRISP3P54108 245 aa2.88□□□□□ -1.95
UBR3-206ENST00000444475 LINC00305Q7Z4B0 112 aa2.88□□□□□ -1.95
UBR3-206ENST00000444475 APCDD1LQ8NCL9 501 aa2.88□□□□□ -1.95
UBR3-206ENST00000444475 LMO3Q8TAP4 145 aa2.88□□□□□ -1.95
UBR3-206ENST00000444475 BRK1Q8WUW1 75 aa2.88□□□□□ -1.95
UBR3-206ENST00000444475 SND1-IT1Q9HBX3 110 aa2.88□□□□□ -1.95
UBR3-206ENST00000444475 FAM60AQ9NP50 221 aa2.88□□□□□ -1.95
UBR3-206ENST00000444475 LINC00588Q9Y4M8 146 aa2.88□□□□□ -1.95
UBR3-206ENST00000444475 NUP205Q92621 2012 aa2.88□□□□□ -1.95
UBR3-206ENST00000444475 ZNF860A6NHJ4 632 aa2.88□□□□□ -1.95
UBR3-206ENST00000444475 LINC01548A6NM66 108 aa2.88□□□□□ -1.95
UBR3-206ENST00000444475 G3V3Q6 166 aa2.88□□□□□ -1.95
UBR3-206ENST00000444475 K7ESM1 405 aa2.88□□□□□ -1.95
UBR3-206ENST00000444475 NTN3O00634 580 aaPredicted RBP2.88□□□□□ -1.95
UBR3-206ENST00000444475 CA7P43166 264 aa2.88□□□□□ -1.95
UBR3-206ENST00000444475 NUDT2P50583 147 aa2.88□□□□□ -1.95
UBR3-206ENST00000444475 SUMO4Q6EEV6 95 aa2.88□□□□□ -1.95
UBR3-206ENST00000444475 TMEM91Q6ZNR0 172 aa2.88□□□□□ -1.95
UBR3-206ENST00000444475 MPLKIPQ8TAP9 179 aa2.88□□□□□ -1.95
UBR3-206ENST00000444475 C10orf82Q8WW14 230 aa2.88□□□□□ -1.95
UBR3-206ENST00000444475 AFDNP55196 1824 aaKnown RBP2.88□□□□□ -1.95
UBR3-206ENST00000444475 PLXNA4Q9HCM2 1894 aa2.87□□□□□ -1.95
UBR3-206ENST00000444475 IGKV1-12A0A0C4DH73 117 aa2.87□□□□□ -1.95
UBR3-206ENST00000444475 ODAMA1E959 279 aa2.87□□□□□ -1.95
UBR3-206ENST00000444475 IGKV1D-12P01611 117 aa2.87□□□□□ -1.95
UBR3-206ENST00000444475 PEA15Q15121 130 aa2.87□□□□□ -1.95
UBR3-206ENST00000444475 LGALS9BQ3B8N2 356 aa2.87□□□□□ -1.95
UBR3-206ENST00000444475 LGALS9CQ6DKI2 356 aa2.87□□□□□ -1.95
UBR3-206ENST00000444475 ALKAL2Q6UX46 152 aa2.87□□□□□ -1.95
UBR3-206ENST00000444475 SLC25A42Q86VD7 318 aa2.87□□□□□ -1.95
UBR3-206ENST00000444475 STAG3L4Q8TBR4 150 aa2.87□□□□□ -1.95
UBR3-206ENST00000444475 ABHD14BQ96IU4 210 aa2.87□□□□□ -1.95
UBR3-206ENST00000444475 AP1S3Q96PC3 154 aa2.87□□□□□ -1.95
UBR3-206ENST00000444475 HIST1H2BLQ99880 126 aa2.87□□□□□ -1.95
UBR3-206ENST00000444475 MOB4Q9Y3A3 225 aa2.87□□□□□ -1.95
UBR3-206ENST00000444475 DNAJC15Q9Y5T4 150 aa2.87□□□□□ -1.95
UBR3-206ENST00000444475 PKD1L2Q7Z442 2459 aa2.87□□□□□ -1.95
UBR3-206ENST00000444475 TRAV9-1A0A075B6T8 112 aa2.87□□□□□ -1.95
UBR3-206ENST00000444475 OOSP1A8MZH6 123 aa2.87□□□□□ -1.95
UBR3-206ENST00000444475 C9JCJ5 164 aa2.87□□□□□ -1.95
UBR3-206ENST00000444475 H3BQ15 152 aa2.87□□□□□ -1.95
UBR3-206ENST00000444475 APOC3P02656 99 aa2.87□□□□□ -1.95
UBR3-206ENST00000444475 IQCJQ1A5X6 159 aa2.87□□□□□ -1.95
UBR3-206ENST00000444475 UNQ5815/PRO19632Q6UWF5 114 aa2.87□□□□□ -1.95
UBR3-206ENST00000444475 IZUMO2Q6UXV1 221 aa2.87□□□□□ -1.95
UBR3-206ENST00000444475 FAM57AQ8TBR7 257 aa2.87□□□□□ -1.95
UBR3-206ENST00000444475 LSM10Q969L4 123 aaKnown RBP2.87□□□□□ -1.95
UBR3-206ENST00000444475 HYLS1Q96M11 299 aa2.87□□□□□ -1.95
UBR3-206ENST00000444475 CIB3Q96Q77 187 aaPredicted RBP2.87□□□□□ -1.95
UBR3-206ENST00000444475 PKMYT1Q99640 499 aa2.87□□□□□ -1.95
UBR3-206ENST00000444475 OCR1Q9BZK8 76 aa2.87□□□□□ -1.95
UBR3-206ENST00000444475 FAM181BA6NEQ2 426 aa2.87□□□□□ -1.95
UBR3-206ENST00000444475 PEX7O00628 323 aa2.87□□□□□ -1.95
UBR3-206ENST00000444475 UQCRQO14949 82 aa2.87□□□□□ -1.95
UBR3-206ENST00000444475 RNASE4P34096 147 aaKnown RBP2.87□□□□□ -1.95
UBR3-206ENST00000444475 KRTAP27-1Q3LI81 207 aa2.87□□□□□ -1.95
UBR3-206ENST00000444475 NFE4Q86UQ8 179 aa2.87□□□□□ -1.95
UBR3-206ENST00000444475 RNF182Q8N6D2 247 aa2.87□□□□□ -1.95
UBR3-206ENST00000444475 TBL1YQ9BQ87 522 aa2.87□□□□□ -1.95
UBR3-206ENST00000444475 HDHD3Q9BSH5 251 aaPredicted RBP2.87□□□□□ -1.95
UBR3-206ENST00000444475 CLEC7AQ9BXN2 247 aa2.87□□□□□ -1.95
UBR3-206ENST00000444475 COL1A1P02452 1464 aaPredicted RBP2.86□□□□□ -1.95
UBR3-206ENST00000444475 MYH8P13535 1937 aa2.86□□□□□ -1.95
UBR3-206ENST00000444475 IGHV4-30-2A0A087WSY4 118 aa2.86□□□□□ -1.95
UBR3-206ENST00000444475 IGLC7A0M8Q6 106 aa2.86□□□□□ -1.95
UBR3-206ENST00000444475 OR2T8A6NH00 312 aa2.86□□□□□ -1.95
UBR3-206ENST00000444475 A8MWV9 139 aa2.86□□□□□ -1.95
UBR3-206ENST00000444475 H3BMG7 143 aa2.86□□□□□ -1.95
UBR3-206ENST00000444475 BUB1B-PAK6H3BSN5 160 aa2.86□□□□□ -1.95
UBR3-206ENST00000444475 DUSP14O95147 198 aaKnown RBP2.86□□□□□ -1.95
UBR3-206ENST00000444475 HLA-DRB4P13762 266 aa2.86□□□□□ -1.95
UBR3-206ENST00000444475 LINC00205P59089 165 aa2.86□□□□□ -1.95
UBR3-206ENST00000444475 SSX8Q7RTT4 187 aa2.86□□□□□ -1.95
UBR3-206ENST00000444475 KLK15Q9H2R5 256 aa2.86□□□□□ -1.95
UBR3-206ENST00000444475 HLA-DRB4X5D2U9 266 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 138.1 ms