RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 CECR9P0C854 216 aa8.36□□□□□ -1.07
SYNE2-206ENST00000441438 RPS11P62280 158 aaKnown RBP eCLIP8.36□□□□□ -1.07
SYNE2-206ENST00000441438 PLGLB1Q02325 96 aa8.36□□□□□ -1.07
SYNE2-206ENST00000441438 FUT5Q11128 374 aa8.36□□□□□ -1.07
SYNE2-206ENST00000441438 C9orf153Q5TBE3 101 aa8.36□□□□□ -1.07
SYNE2-206ENST00000441438 OR10J6PQ8NGY7 276 aa8.36□□□□□ -1.07
SYNE2-206ENST00000441438 S100A16Q96FQ6 103 aaKnown RBP8.36□□□□□ -1.07
SYNE2-206ENST00000441438 IMMP2LQ96T52 175 aa8.36□□□□□ -1.07
SYNE2-206ENST00000441438 MRPL20Q9BYC9 149 aaKnown RBP8.36□□□□□ -1.07
SYNE2-206ENST00000441438 CMC2Q9NRP2 79 aa8.36□□□□□ -1.07
SYNE2-206ENST00000441438 PXMP4Q9Y6I8 212 aa8.36□□□□□ -1.07
SYNE2-206ENST00000441438 RTTNQ86VV8 2226 aa8.36□□□□□ -1.07
SYNE2-206ENST00000441438 TRBV5-5A0A0J9YX44 114 aa8.36□□□□□ -1.07
SYNE2-206ENST00000441438 MED19A0JLT2 244 aaPredicted RBP8.36□□□□□ -1.07
SYNE2-206ENST00000441438 C3orf56Q8N813 242 aa8.36□□□□□ -1.07
SYNE2-206ENST00000441438 OR4X2Q8NGF9 303 aa8.36□□□□□ -1.07
SYNE2-206ENST00000441438 C18orf15Q96N68 181 aa8.36□□□□□ -1.07
SYNE2-206ENST00000441438 AICDAQ9GZX7 198 aa8.36□□□□□ -1.07
SYNE2-206ENST00000441438 TRAV14DV4A0A0A6YYC5 116 aa8.35□□□□□ -1.07
SYNE2-206ENST00000441438 IGKV1-8A0A0C4DH67 115 aa8.35□□□□□ -1.07
SYNE2-206ENST00000441438 CFHR3Q02985 330 aa8.35□□□□□ -1.07
SYNE2-206ENST00000441438 SSBP1Q04837 148 aaKnown RBP8.35□□□□□ -1.07
SYNE2-206ENST00000441438 CDK5R1Q15078 307 aa8.35□□□□□ -1.07
SYNE2-206ENST00000441438 CCL4L1Q8NHW4 92 aa8.35□□□□□ -1.07
SYNE2-206ENST00000441438 CXCL1P09341 107 aa8.35□□□□□ -1.07
SYNE2-206ENST00000441438 BVES-AS1Q5T3Y7 98 aa8.35□□□□□ -1.07
SYNE2-206ENST00000441438 C1orf189Q5VU69 101 aa8.35□□□□□ -1.07
SYNE2-206ENST00000441438 BRK1Q8WUW1 75 aa8.35□□□□□ -1.07
SYNE2-206ENST00000441438 VSIG4Q9Y279 399 aa8.35□□□□□ -1.07
SYNE2-206ENST00000441438 CHCHD2Q9Y6H1 151 aaPredicted RBP8.35□□□□□ -1.07
SYNE2-206ENST00000441438 LRP4O75096 1905 aa8.35□□□□□ -1.07
SYNE2-206ENST00000441438 A0A087WWC5 75 aa8.35□□□□□ -1.07
SYNE2-206ENST00000441438 TRAV8-2A0A0B4J237 113 aa8.35□□□□□ -1.07
SYNE2-206ENST00000441438 TMEM262E9PQX1 116 aa8.35□□□□□ -1.07
SYNE2-206ENST00000441438 ADIRFQ15847 76 aa8.35□□□□□ -1.07
SYNE2-206ENST00000441438 ZNF880Q6PDB4 577 aa8.35□□□□□ -1.07
SYNE2-206ENST00000441438 SLC22A24Q8N4F4 322 aa8.35□□□□□ -1.07
SYNE2-206ENST00000441438 OR10G8Q8NGN5 311 aa8.35□□□□□ -1.07
SYNE2-206ENST00000441438 C20orf78Q9BR46 151 aa8.35□□□□□ -1.07
SYNE2-206ENST00000441438 RP1P56715 2156 aa8.34□□□□□ -1.07
SYNE2-206ENST00000441438 EML5Q05BV3 1969 aa8.34□□□□□ -1.07
SYNE2-206ENST00000441438 TMEM272A0A1B0GTI8 110 aa8.34□□□□□ -1.07
SYNE2-206ENST00000441438 KANTRA0A1W2PQU2 76 aa8.34□□□□□ -1.07
SYNE2-206ENST00000441438 C9orf118A6NHY6 69 aa8.34□□□□□ -1.07
SYNE2-206ENST00000441438 F8W1H4 67 aa8.34□□□□□ -1.07
SYNE2-206ENST00000441438 XKRYO14609 159 aa8.34□□□□□ -1.07
SYNE2-206ENST00000441438 LYZL6O75951 148 aa8.34□□□□□ -1.07
SYNE2-206ENST00000441438 RBMY1CP0DJD4 496 aa8.34□□□□□ -1.07
SYNE2-206ENST00000441438 MED14OSP0DP75 135 aa8.34□□□□□ -1.07
SYNE2-206ENST00000441438 TMEM258P61165 79 aa8.34□□□□□ -1.07
SYNE2-206ENST00000441438 C1orf174Q8IYL3 243 aa8.34□□□□□ -1.07
SYNE2-206ENST00000441438 CNRIP1Q96F85 164 aaPredicted RBP8.34□□□□□ -1.07
SYNE2-206ENST00000441438 GPX7Q96SL4 187 aaPredicted RBP8.34□□□□□ -1.07
SYNE2-206ENST00000441438 C19orf73Q9NVV2 129 aa8.34□□□□□ -1.07
SYNE2-206ENST00000441438 MED12Q93074 2177 aa8.34□□□□□ -1.07
SYNE2-206ENST00000441438 J3QLW9 94 aa8.34□□□□□ -1.07
SYNE2-206ENST00000441438 ISLRO14498 428 aa8.34□□□□□ -1.07
SYNE2-206ENST00000441438 DEDDO75618 318 aa8.34□□□□□ -1.07
SYNE2-206ENST00000441438 FXYD6P3P58550 94 aa8.34□□□□□ -1.07
SYNE2-206ENST00000441438 NEUROG1Q92886 237 aa8.34□□□□□ -1.07
SYNE2-206ENST00000441438 MPDZO75970 2070 aa8.34□□□□□ -1.07
SYNE2-206ENST00000441438 ZDBF2Q9HCK1 2354 aa8.34□□□□□ -1.07
SYNE2-206ENST00000441438 PIEZO1Q92508 2521 aa8.34□□□□□ -1.08
SYNE2-206ENST00000441438 PSMB8P28062 276 aa8.33□□□□□ -1.08
SYNE2-206ENST00000441438 CACNG7P62955 275 aa8.33□□□□□ -1.08
SYNE2-206ENST00000441438 UNQ9165/PRO28630Q6UXU0 137 aa8.33□□□□□ -1.08
SYNE2-206ENST00000441438 LINC00311Q8N616 119 aa8.33□□□□□ -1.08
SYNE2-206ENST00000441438 PATE1Q8WXA2 126 aa8.33□□□□□ -1.08
SYNE2-206ENST00000441438 ST20Q9HBF5 79 aa8.33□□□□□ -1.08
SYNE2-206ENST00000441438 UNC13CQ8NB66 2214 aa8.33□□□□□ -1.08
SYNE2-206ENST00000441438 TRAV27A0A087WT01 109 aa8.33□□□□□ -1.08
SYNE2-206ENST00000441438 C5orf49A4QMS7 147 aa8.33□□□□□ -1.08
SYNE2-206ENST00000441438 NAPSAO96009 420 aa8.33□□□□□ -1.08
SYNE2-206ENST00000441438 ZNF90Q03938 601 aa8.33□□□□□ -1.08
SYNE2-206ENST00000441438 PIK3CD-AS1Q5SR53 167 aa8.33□□□□□ -1.08
SYNE2-206ENST00000441438 ATP5L2Q7Z4Y8 100 aa8.33□□□□□ -1.08
SYNE2-206ENST00000441438 OR2A1Q8NGT9 310 aa8.33□□□□□ -1.08
SYNE2-206ENST00000441438 SGMS2Q8NHU3 365 aa8.33□□□□□ -1.08
SYNE2-206ENST00000441438 AMELYQ99218 206 aa8.33□□□□□ -1.08
SYNE2-206ENST00000441438 LOC101059948A0A1B0GTJ6 334 aa8.33□□□□□ -1.08
SYNE2-206ENST00000441438 MYCNOSP40205 109 aa8.33□□□□□ -1.08
SYNE2-206ENST00000441438 INSL3P51460 131 aa8.33□□□□□ -1.08
SYNE2-206ENST00000441438 RTL8BQ17RB0 113 aa8.33□□□□□ -1.08
SYNE2-206ENST00000441438 DEFB134Q4QY38 66 aa8.33□□□□□ -1.08
SYNE2-206ENST00000441438 C11orf87Q6NUJ2 197 aa8.33□□□□□ -1.08
SYNE2-206ENST00000441438 PRR15Q8IV56 129 aa8.33□□□□□ -1.08
SYNE2-206ENST00000441438 RTL8AQ9BWD3 113 aa8.33□□□□□ -1.08
SYNE2-206ENST00000441438 V9GY05 133 aa8.33□□□□□ -1.08
SYNE2-206ENST00000441438 RRHO14718 337 aa8.32□□□□□ -1.08
SYNE2-206ENST00000441438 FCGR3AP08637 254 aa8.32□□□□□ -1.08
SYNE2-206ENST00000441438 FOXF1Q12946 379 aa8.32□□□□□ -1.08
SYNE2-206ENST00000441438 CST6Q15828 149 aa8.32□□□□□ -1.08
SYNE2-206ENST00000441438 CENPWQ5EE01 88 aa8.32□□□□□ -1.08
SYNE2-206ENST00000441438 LINC00526Q96FQ7 95 aa8.32□□□□□ -1.08
SYNE2-206ENST00000441438 ZNF799Q96GE5 643 aa8.32□□□□□ -1.08
SYNE2-206ENST00000441438 ZNF581Q9P0T4 197 aa8.32□□□□□ -1.08
SYNE2-206ENST00000441438 OR5V1Q9UGF6 321 aa8.32□□□□□ -1.08
SYNE2-206ENST00000441438 ARID1AO14497 2285 aa8.32□□□□□ -1.08
SYNE2-206ENST00000441438 PRRC2CQ9Y520 2896 aaKnown RBP8.32□□□□□ -1.08
SYNE2-206ENST00000441438 GRIFINA4D1Z8 144 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms