RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 RPH3ALQ9UNE2 315 aa9.65□□□□□ -0.87
LTBR-203ENST00000441074 G3V4G9 280 aa9.64□□□□□ -0.87
LTBR-203ENST00000441074 SAP30O75446 220 aa9.64□□□□□ -0.87
LTBR-203ENST00000441074 IGKV3-15P01624 115 aa9.64□□□□□ -0.87
LTBR-203ENST00000441074 LIPFP07098 398 aa9.64□□□□□ -0.87
LTBR-203ENST00000441074 ZNF841Q6ZN19 808 aa9.64□□□□□ -0.87
LTBR-203ENST00000441074 MOB3BQ86TA1 216 aa9.64□□□□□ -0.87
LTBR-203ENST00000441074 PPP1R35Q8TAP8 253 aa9.64□□□□□ -0.87
LTBR-203ENST00000441074 IFI27L2Q9H2X8 130 aa9.64□□□□□ -0.87
LTBR-203ENST00000441074 SOX21Q9Y651 276 aaPredicted RBP9.64□□□□□ -0.87
LTBR-203ENST00000441074 IGSF10Q6WRI0 2623 aa9.64□□□□□ -0.87
LTBR-203ENST00000441074 ZNF134P52741 427 aa9.64□□□□□ -0.87
LTBR-203ENST00000441074 ATP5IP56385 69 aaPredicted RBP9.64□□□□□ -0.87
LTBR-203ENST00000441074 RIPPLY3P57055 190 aa9.64□□□□□ -0.87
LTBR-203ENST00000441074 PAX2Q02962 417 aa9.64□□□□□ -0.87
LTBR-203ENST00000441074 GTF2H5Q6ZYL4 71 aa9.64□□□□□ -0.87
LTBR-203ENST00000441074 ZNF329Q86UD4 541 aa9.64□□□□□ -0.87
LTBR-203ENST00000441074 H1FXQ92522 213 aaKnown RBP9.64□□□□□ -0.87
LTBR-203ENST00000441074 FAM215AQ9Y5M1 114 aa9.64□□□□□ -0.87
LTBR-203ENST00000441074 OR51B2Q9Y5P1 312 aa9.64□□□□□ -0.87
LTBR-203ENST00000441074 TRAV5A0A0B4J249 113 aa9.63□□□□□ -0.87
LTBR-203ENST00000441074 COX8AP10176 69 aa9.63□□□□□ -0.87
LTBR-203ENST00000441074 FOXA3P55318 350 aaPredicted RBP9.63□□□□□ -0.87
LTBR-203ENST00000441074 EDDM3AQ14507 147 aa9.63□□□□□ -0.87
LTBR-203ENST00000441074 GUSBP1Q15486 140 aa9.63□□□□□ -0.87
LTBR-203ENST00000441074 CR1LQ2VPA4 569 aa9.63□□□□□ -0.87
LTBR-203ENST00000441074 CLEC2AQ6UVW9 174 aa9.63□□□□□ -0.87
LTBR-203ENST00000441074 HINT2Q9BX68 163 aa9.63□□□□□ -0.87
LTBR-203ENST00000441074 PRNDQ9UKY0 176 aa9.63□□□□□ -0.87
LTBR-203ENST00000441074 PSMB11A5LHX3 300 aa9.62□□□□□ -0.87
LTBR-203ENST00000441074 FAM231BA6NCW3 169 aa9.62□□□□□ -0.87
LTBR-203ENST00000441074 LOXL3P58215 753 aa9.62□□□□□ -0.87
LTBR-203ENST00000441074 C2orf91Q6ZV80 131 aa9.62□□□□□ -0.87
LTBR-203ENST00000441074 CD177Q8N6Q3 437 aa9.62□□□□□ -0.87
LTBR-203ENST00000441074 Q8NA96 180 aa9.62□□□□□ -0.87
LTBR-203ENST00000441074 OR1B1Q8NGR6 318 aa9.62□□□□□ -0.87
LTBR-203ENST00000441074 OR9G1Q8NH87 305 aa9.62□□□□□ -0.87
LTBR-203ENST00000441074 RAB9BQ9NP90 201 aa9.62□□□□□ -0.87
LTBR-203ENST00000441074 HSPB8Q9UJY1 196 aa9.62□□□□□ -0.87
LTBR-203ENST00000441074 FZR1Q9UM11 496 aa9.62□□□□□ -0.87
LTBR-203ENST00000441074 F2RL2O00254 374 aa9.62□□□□□ -0.87
LTBR-203ENST00000441074 MYOD1P15172 320 aa9.62□□□□□ -0.87
LTBR-203ENST00000441074 PRDX2P32119 198 aa9.62□□□□□ -0.87
LTBR-203ENST00000441074 PRCDQ00LT1 54 aa9.62□□□□□ -0.87
LTBR-203ENST00000441074 LY6DQ14210 128 aa9.62□□□□□ -0.87
LTBR-203ENST00000441074 POU2AF1Q16633 256 aa9.62□□□□□ -0.87
LTBR-203ENST00000441074 C2orf83Q53S99 150 aa9.62□□□□□ -0.87
LTBR-203ENST00000441074 TMEM97Q5BJF2 176 aa9.62□□□□□ -0.87
LTBR-203ENST00000441074 LINC01545Q5VT33 79 aa9.62□□□□□ -0.87
LTBR-203ENST00000441074 MORN5Q5VZ52 161 aa9.62□□□□□ -0.87
LTBR-203ENST00000441074 MBNL2Q5VZF2 373 aaKnown RBP9.62□□□□□ -0.87
LTBR-203ENST00000441074 C1orf229Q6ZS94 237 aaPredicted RBP9.62□□□□□ -0.87
LTBR-203ENST00000441074 BPIFA4PQ86YQ2 179 aa9.62□□□□□ -0.87
LTBR-203ENST00000441074 LRRC29Q8WV35 223 aa9.62□□□□□ -0.87
LTBR-203ENST00000441074 NDFIP1Q9BT67 221 aa9.62□□□□□ -0.87
LTBR-203ENST00000441074 ZNF430Q9H8G1 570 aaPredicted RBP9.62□□□□□ -0.87
LTBR-203ENST00000441074 ZNF257Q9Y2Q1 563 aa9.62□□□□□ -0.87
LTBR-203ENST00000441074 PCNX1Q96RV3 2341 aa9.61□□□□□ -0.87
LTBR-203ENST00000441074 MGST3O14880 152 aa9.61□□□□□ -0.87
LTBR-203ENST00000441074 C22orf34Q6ZV56 151 aa9.61□□□□□ -0.87
LTBR-203ENST00000441074 ZNF714Q96N38 554 aa9.61□□□□□ -0.87
LTBR-203ENST00000441074 PAXXQ9BUH6 204 aa9.61□□□□□ -0.87
LTBR-203ENST00000441074 INTS1Q8N201 2190 aaKnown RBP9.61□□□□□ -0.87
LTBR-203ENST00000441074 C9orf118A6NHY6 69 aa9.61□□□□□ -0.87
LTBR-203ENST00000441074 A8MWL6 223 aa9.61□□□□□ -0.87
LTBR-203ENST00000441074 H3BRM9 83 aa9.61□□□□□ -0.87
LTBR-203ENST00000441074 IGHV3-13P01766 116 aa9.61□□□□□ -0.87
LTBR-203ENST00000441074 IGHV3-7P01780 117 aa9.61□□□□□ -0.87
LTBR-203ENST00000441074 HTR1DP28221 377 aa9.61□□□□□ -0.87
LTBR-203ENST00000441074 CT83Q5H943 113 aa9.61□□□□□ -0.87
LTBR-203ENST00000441074 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.61□□□□□ -0.87
LTBR-203ENST00000441074 RPP21Q9H633 154 aaKnown RBP9.61□□□□□ -0.87
LTBR-203ENST00000441074 APOBEC3AP31941 199 aaPredicted RBP9.6□□□□□ -0.87
LTBR-203ENST00000441074 PRSS22Q9GZN4 317 aa9.6□□□□□ -0.87
LTBR-203ENST00000441074 KMT2BQ9UMN6 2715 aaPredicted RBP9.6□□□□□ -0.87
LTBR-203ENST00000441074 SRRM5B3KS81 715 aa9.6□□□□□ -0.87
LTBR-203ENST00000441074 PYYP10082 97 aa9.6□□□□□ -0.87
LTBR-203ENST00000441074 CD24P25063 80 aa9.6□□□□□ -0.87
LTBR-203ENST00000441074 CD69Q07108 199 aa9.6□□□□□ -0.87
LTBR-203ENST00000441074 MLANAQ16655 118 aa9.6□□□□□ -0.87
LTBR-203ENST00000441074 LHFPL4Q7Z7J7 247 aa9.6□□□□□ -0.87
LTBR-203ENST00000441074 OR1L8Q8NGR8 309 aa9.6□□□□□ -0.87
LTBR-203ENST00000441074 AP1S3Q96PC3 154 aa9.6□□□□□ -0.87
LTBR-203ENST00000441074 FNDC4Q9H6D8 234 aaPredicted RBP9.6□□□□□ -0.87
LTBR-203ENST00000441074 PPIAL4DF5H284 164 aa9.59□□□□□ -0.87
LTBR-203ENST00000441074 K7EP34 96 aa9.59□□□□□ -0.87
LTBR-203ENST00000441074 UPK2O00526 184 aa9.59□□□□□ -0.87
LTBR-203ENST00000441074 IGLV1-44P01699 117 aa9.59□□□□□ -0.87
LTBR-203ENST00000441074 APOA2P02652 100 aa9.59□□□□□ -0.87
LTBR-203ENST00000441074 CECR9P0C854 216 aa9.59□□□□□ -0.87
LTBR-203ENST00000441074 CFHR2P36980 270 aa9.59□□□□□ -0.87
LTBR-203ENST00000441074 MYCNOSP40205 109 aa9.59□□□□□ -0.87
LTBR-203ENST00000441074 PRR31Q5SQ13 230 aa9.59□□□□□ -0.87
LTBR-203ENST00000441074 ZNF474Q6S9Z5 364 aaPredicted RBP9.59□□□□□ -0.87
LTBR-203ENST00000441074 NEGR1Q7Z3B1 354 aa9.59□□□□□ -0.87
LTBR-203ENST00000441074 CACNG8Q8WXS5 425 aa9.59□□□□□ -0.87
LTBR-203ENST00000441074 ZC2HC1AQ96GY0 325 aa9.59□□□□□ -0.87
LTBR-203ENST00000441074 ADTRPQ96IZ2 230 aa9.59□□□□□ -0.87
LTBR-203ENST00000441074 MCRIP2Q9BUT9 160 aaKnown RBP9.59□□□□□ -0.87
LTBR-203ENST00000441074 GFRA4Q9GZZ7 299 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms