RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 TRAV9-2A0A087WT02 112 aa8.09□□□□□ -1.11
CDC42SE1-202ENST00000439374 PGPA6NDG6 321 aa8.09□□□□□ -1.11
CDC42SE1-202ENST00000439374 SRSF7Q16629 238 aaKnown RBP eCLIP8.09□□□□□ -1.116e-6■■■□□ 15.5
CDC42SE1-202ENST00000439374 WDR73Q6P4I2 378 aa8.09□□□□□ -1.11
CDC42SE1-202ENST00000439374 TMEM108Q6UXF1 575 aa8.09□□□□□ -1.11
CDC42SE1-202ENST00000439374 C1orf229Q6ZS94 237 aaPredicted RBP8.09□□□□□ -1.11
CDC42SE1-202ENST00000439374 NUP35Q8NFH5 326 aa8.09□□□□□ -1.11
CDC42SE1-202ENST00000439374 SAP30LQ9HAJ7 183 aa8.09□□□□□ -1.11
CDC42SE1-202ENST00000439374 FAM208BQ5VWN6 2430 aa8.09□□□□□ -1.11
CDC42SE1-202ENST00000439374 IGHV3-35A0A0C4DH35 117 aa8.09□□□□□ -1.11
CDC42SE1-202ENST00000439374 GAGE10A6NGK3 116 aa8.09□□□□□ -1.11
CDC42SE1-202ENST00000439374 CX3CL1P78423 397 aa8.09□□□□□ -1.11
CDC42SE1-202ENST00000439374 PSG9Q00887 426 aa8.09□□□□□ -1.11
CDC42SE1-202ENST00000439374 TMEM177Q53S58 311 aa8.09□□□□□ -1.11
CDC42SE1-202ENST00000439374 OCIAD2Q56VL3 154 aa8.09□□□□□ -1.11
CDC42SE1-202ENST00000439374 GDF5OSQ5U4N7 250 aa8.09□□□□□ -1.11
CDC42SE1-202ENST00000439374 Q8N976 141 aa8.09□□□□□ -1.11
CDC42SE1-202ENST00000439374 TMEM70Q9BUB7 260 aa8.09□□□□□ -1.11
CDC42SE1-202ENST00000439374 PLSCR4Q9NRQ2 329 aa8.09□□□□□ -1.11
CDC42SE1-202ENST00000439374 SLC25A10Q9UBX3 287 aaPredicted RBP8.09□□□□□ -1.11
CDC42SE1-202ENST00000439374 SVEP1Q4LDE5 3571 aa8.09□□□□□ -1.11
CDC42SE1-202ENST00000439374 CUBNO60494 3623 aa8.09□□□□□ -1.11
CDC42SE1-202ENST00000439374 TRAV8-6A0A0B4J262 113 aa8.09□□□□□ -1.11
CDC42SE1-202ENST00000439374 hADV38S2A0JD32 116 aa8.09□□□□□ -1.11
CDC42SE1-202ENST00000439374 GAGE12BA1L429 117 aa8.09□□□□□ -1.11
CDC42SE1-202ENST00000439374 SRRM5B3KS81 715 aa8.09□□□□□ -1.11
CDC42SE1-202ENST00000439374 HLA-DQA1P01909 254 aa8.09□□□□□ -1.11
CDC42SE1-202ENST00000439374 C1orf185Q5T7R7 199 aa8.09□□□□□ -1.11
CDC42SE1-202ENST00000439374 SLC25A34Q6PIV7 304 aa8.09□□□□□ -1.11
CDC42SE1-202ENST00000439374 TTTY13Q9BZ97 58 aa8.09□□□□□ -1.11
CDC42SE1-202ENST00000439374 FAM90A26D6RGX4 464 aa8.08□□□□□ -1.12
CDC42SE1-202ENST00000439374 LY6HO94772 140 aa8.08□□□□□ -1.12
CDC42SE1-202ENST00000439374 IGHV1-46P01743 117 aa8.08□□□□□ -1.12
CDC42SE1-202ENST00000439374 CD40P25942 277 aa8.08□□□□□ -1.12
CDC42SE1-202ENST00000439374 DIAPH2-AS1Q14236 149 aa8.08□□□□□ -1.12
CDC42SE1-202ENST00000439374 RTL8BQ17RB0 113 aa8.08□□□□□ -1.12
CDC42SE1-202ENST00000439374 SMIM15Q7Z3B0 74 aa8.08□□□□□ -1.12
CDC42SE1-202ENST00000439374 PRNTQ86SH4 94 aa8.08□□□□□ -1.12
CDC42SE1-202ENST00000439374 NUDT10Q8NFP7 164 aa8.08□□□□□ -1.12
CDC42SE1-202ENST00000439374 NUDT11Q96G61 164 aa8.08□□□□□ -1.12
CDC42SE1-202ENST00000439374 TNFRSF19Q9NS68 423 aa8.08□□□□□ -1.12
CDC42SE1-202ENST00000439374 IGKV1OR2-108A0A075B7D4 117 aa8.08□□□□□ -1.12
CDC42SE1-202ENST00000439374 K7EP13 123 aa8.08□□□□□ -1.12
CDC42SE1-202ENST00000439374 IGHG3P01860 377 aa8.08□□□□□ -1.12
CDC42SE1-202ENST00000439374 FAM87AP0C7U9 286 aa8.08□□□□□ -1.12
CDC42SE1-202ENST00000439374 GLRXP35754 106 aa8.08□□□□□ -1.12
CDC42SE1-202ENST00000439374 OR1L4Q8NGR5 311 aa8.08□□□□□ -1.12
CDC42SE1-202ENST00000439374 GAL3ST2Q9H3Q3 398 aa8.08□□□□□ -1.12
CDC42SE1-202ENST00000439374 C16orf97H3BN30 126 aa8.08□□□□□ -1.12
CDC42SE1-202ENST00000439374 SLC25A17O43808 307 aa8.08□□□□□ -1.12
CDC42SE1-202ENST00000439374 BSPH1Q075Z2 132 aa8.08□□□□□ -1.12
CDC42SE1-202ENST00000439374 PRSS3P2Q8NHM4 247 aa8.08□□□□□ -1.12
CDC42SE1-202ENST00000439374 IFI27L2Q9H2X8 130 aa8.08□□□□□ -1.12
CDC42SE1-202ENST00000439374 FAM215AQ9Y5M1 114 aa8.08□□□□□ -1.12
CDC42SE1-202ENST00000439374 C15orf65H3BRN8 121 aa8.07□□□□□ -1.12
CDC42SE1-202ENST00000439374 ARF6P62330 175 aa8.07□□□□□ -1.12
CDC42SE1-202ENST00000439374 LINC01560Q8TB33 94 aa8.07□□□□□ -1.12
CDC42SE1-202ENST00000439374 PAXXQ9BUH6 204 aa8.07□□□□□ -1.12
CDC42SE1-202ENST00000439374 GNB1LQ9BYB4 327 aa8.07□□□□□ -1.12
CDC42SE1-202ENST00000439374 MRPL20Q9BYC9 149 aaKnown RBP8.07□□□□□ -1.12
CDC42SE1-202ENST00000439374 JPT1Q9UK76 154 aa8.07□□□□□ -1.12
CDC42SE1-202ENST00000439374 DSCAMO60469 2012 aa8.07□□□□□ -1.12
CDC42SE1-202ENST00000439374 A0A1W2PRE2 83 aa8.07□□□□□ -1.12
CDC42SE1-202ENST00000439374 HSPE1P61604 102 aaKnown RBP8.07□□□□□ -1.12
CDC42SE1-202ENST00000439374 SMAGPQ0VAQ4 97 aa8.07□□□□□ -1.12
CDC42SE1-202ENST00000439374 TIMM23BQ5SRD1 257 aa8.07□□□□□ -1.12
CDC42SE1-202ENST00000439374 ARL6IP6Q8N6S5 226 aa8.07□□□□□ -1.12
CDC42SE1-202ENST00000439374 SFXN3Q9BWM7 321 aa8.07□□□□□ -1.12
CDC42SE1-202ENST00000439374 GTSF1LQ9H1H1 148 aa8.07□□□□□ -1.12
CDC42SE1-202ENST00000439374 THYN1Q9P016 225 aa8.07□□□□□ -1.12
CDC42SE1-202ENST00000439374 KBTBD11-OT1A0A1B0GTJ5 212 aa8.06□□□□□ -1.12
CDC42SE1-202ENST00000439374 C7orf71A4D174 169 aa8.06□□□□□ -1.12
CDC42SE1-202ENST00000439374 COL8A1P27658 744 aa8.06□□□□□ -1.12
CDC42SE1-202ENST00000439374 CIARTQ8N365 385 aaPredicted RBP8.06□□□□□ -1.12
CDC42SE1-202ENST00000439374 Q8N7P7 452 aa8.06□□□□□ -1.12
CDC42SE1-202ENST00000439374 ORAOV1Q8WV07 137 aa8.06□□□□□ -1.12
CDC42SE1-202ENST00000439374 SORL1Q92673 2214 aa8.06□□□□□ -1.12
CDC42SE1-202ENST00000439374 LRBAP50851 2863 aa8.06□□□□□ -1.12
CDC42SE1-202ENST00000439374 NPIPB11E5RHQ5 1161 aa8.06□□□□□ -1.12
CDC42SE1-202ENST00000439374 LYPD2Q6UXB3 125 aa8.06□□□□□ -1.12
CDC42SE1-202ENST00000439374 TMUB1Q9BVT8 246 aa8.06□□□□□ -1.12
CDC42SE1-202ENST00000439374 CSPG4Q6UVK1 2322 aa8.06□□□□□ -1.12
CDC42SE1-202ENST00000439374 ACACBO00763 2458 aa8.06□□□□□ -1.12
CDC42SE1-202ENST00000439374 SRRM4A7MD48 611 aaKnown RBP8.06□□□□□ -1.12
CDC42SE1-202ENST00000439374 NDUFB3O43676 98 aa8.06□□□□□ -1.12
CDC42SE1-202ENST00000439374 TAS2R45P59539 299 aa8.06□□□□□ -1.12
CDC42SE1-202ENST00000439374 CENPVQ7Z7K6 275 aaPredicted RBP8.06□□□□□ -1.12
CDC42SE1-202ENST00000439374 TM4SF5O14894 197 aa8.05□□□□□ -1.12
CDC42SE1-202ENST00000439374 P01737 135 aa8.05□□□□□ -1.12
CDC42SE1-202ENST00000439374 CTRLP40313 264 aa8.05□□□□□ -1.12
CDC42SE1-202ENST00000439374 LYZP61626 148 aa8.05□□□□□ -1.12
CDC42SE1-202ENST00000439374 TBR1Q16650 682 aa8.05□□□□□ -1.12
CDC42SE1-202ENST00000439374 CLEC2AQ6UVW9 174 aa8.05□□□□□ -1.12
CDC42SE1-202ENST00000439374 HES4Q9HCC6 221 aa8.05□□□□□ -1.12
CDC42SE1-202ENST00000439374 FAM231BA6NCW3 169 aa8.05□□□□□ -1.12
CDC42SE1-202ENST00000439374 VSTM5A8MXK1 200 aa8.05□□□□□ -1.12
CDC42SE1-202ENST00000439374 J3QW42 95 aa8.05□□□□□ -1.12
CDC42SE1-202ENST00000439374 CRYABP02511 175 aaKnown RBP8.05□□□□□ -1.12
CDC42SE1-202ENST00000439374 TNFRSF1AP19438 455 aa8.05□□□□□ -1.12
CDC42SE1-202ENST00000439374 GCSHP23434 173 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms