RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 C6orf15Q6UXA7 325 aaPredicted RBP10.82□□□□□ -0.68
ACTN1-204ENST00000438964 C2orf91Q6ZV80 131 aa10.82□□□□□ -0.68
ACTN1-204ENST00000438964 FER1L6-AS1Q8NA97 138 aa10.82□□□□□ -0.68
ACTN1-204ENST00000438964 FOXA2Q9Y261 457 aaPredicted RBP10.82□□□□□ -0.68
ACTN1-204ENST00000438964 CECR9P0C854 216 aa10.82□□□□□ -0.68
ACTN1-204ENST00000438964 DIAPH2-AS1Q14236 149 aa10.82□□□□□ -0.68
ACTN1-204ENST00000438964 GCSAMQ8N6F7 178 aa10.82□□□□□ -0.68
ACTN1-204ENST00000438964 RBMXL3Q8N7X1 1067 aaKnown RBP10.82□□□□□ -0.68
ACTN1-204ENST00000438964 AP1S3Q96PC3 154 aa10.82□□□□□ -0.68
ACTN1-204ENST00000438964 JPT1Q9UK76 154 aa10.82□□□□□ -0.68
ACTN1-204ENST00000438964 MED13LQ71F56 2210 aa10.81□□□□□ -0.68
ACTN1-204ENST00000438964 CACNA1HO95180 2353 aa10.81□□□□□ -0.68
ACTN1-204ENST00000438964 TNFSF15O95150 251 aa10.81□□□□□ -0.68
ACTN1-204ENST00000438964 P01737 135 aa10.81□□□□□ -0.68
ACTN1-204ENST00000438964 IGLC1P0CG04 106 aa10.81□□□□□ -0.68
ACTN1-204ENST00000438964 RNASE2P10153 161 aaKnown RBP10.81□□□□□ -0.68
ACTN1-204ENST00000438964 BPIFA4PQ86YQ2 179 aa10.81□□□□□ -0.68
ACTN1-204ENST00000438964 TTTY13Q9BZ97 58 aa10.81□□□□□ -0.68
ACTN1-204ENST00000438964 ZNF430Q9H8G1 570 aaPredicted RBP10.81□□□□□ -0.68
ACTN1-204ENST00000438964 TMSB15BA0A087X1C1 80 aa10.81□□□□□ -0.68
ACTN1-204ENST00000438964 APOHP02749 345 aaPredicted RBP10.81□□□□□ -0.68
ACTN1-204ENST00000438964 GUSBP1Q15486 140 aa10.81□□□□□ -0.68
ACTN1-204ENST00000438964 CORO2AQ92828 525 aa10.81□□□□□ -0.68
ACTN1-204ENST00000438964 hADV38S2A0JD32 116 aa10.8□□□□□ -0.68
ACTN1-204ENST00000438964 FAM87AP0C7U9 286 aa10.8□□□□□ -0.68
ACTN1-204ENST00000438964 RPL24P83731 157 aaKnown RBP10.8□□□□□ -0.68
ACTN1-204ENST00000438964 C17orf58Q2M2W7 97 aa10.8□□□□□ -0.68
ACTN1-204ENST00000438964 FAM216BQ8N7L0 139 aa10.8□□□□□ -0.68
ACTN1-204ENST00000438964 THYN1Q9P016 225 aa10.8□□□□□ -0.68
ACTN1-204ENST00000438964 PEF1Q9UBV8 284 aaKnown RBP10.8□□□□□ -0.68
ACTN1-204ENST00000438964 ZNF257Q9Y2Q1 563 aa10.8□□□□□ -0.68
ACTN1-204ENST00000438964 A0A1B0GXF2 115 aa10.8□□□□□ -0.68
ACTN1-204ENST00000438964 HOXC12P31275 282 aa10.8□□□□□ -0.68
ACTN1-204ENST00000438964 DLX1P56177 255 aa10.8□□□□□ -0.68
ACTN1-204ENST00000438964 PRCDQ00LT1 54 aa10.8□□□□□ -0.68
ACTN1-204ENST00000438964 MEF2CQ06413 473 aaPredicted RBP10.8□□□□□ -0.68
ACTN1-204ENST00000438964 CD69Q07108 199 aa10.8□□□□□ -0.68
ACTN1-204ENST00000438964 WIPF2Q8TF74 440 aaPredicted RBP10.8□□□□□ -0.68
ACTN1-204ENST00000438964 ITLN1Q8WWA0 313 aa10.8□□□□□ -0.68
ACTN1-204ENST00000438964 FXYD5Q96DB9 178 aa10.8□□□□□ -0.68
ACTN1-204ENST00000438964 RPP21Q9H633 154 aaKnown RBP10.8□□□□□ -0.68
ACTN1-204ENST00000438964 RABAC1Q9UI14 185 aa10.8□□□□□ -0.68
ACTN1-204ENST00000438964 IGHV3-72A0A0B4J1Y9 119 aa10.79□□□□□ -0.68
ACTN1-204ENST00000438964 CD5LO43866 347 aa10.79□□□□□ -0.68
ACTN1-204ENST00000438964 OR2J3O76001 311 aa10.79□□□□□ -0.68
ACTN1-204ENST00000438964 PDPNQ86YL7 162 aa10.79□□□□□ -0.68
ACTN1-204ENST00000438964 OR4A5Q8NH83 315 aa10.79□□□□□ -0.68
ACTN1-204ENST00000438964 DAZAP1Q96EP5 407 aaKnown RBP10.79□□□□□ -0.68
ACTN1-204ENST00000438964 CCL13Q99616 98 aa10.79□□□□□ -0.68
ACTN1-204ENST00000438964 SPOCK3Q9BQ16 436 aa10.79□□□□□ -0.68
ACTN1-204ENST00000438964 CT45A6P0DMU7 189 aa10.79□□□□□ -0.68
ACTN1-204ENST00000438964 CT45A5P0DMU8 189 aa10.79□□□□□ -0.68
ACTN1-204ENST00000438964 CT45A7P0DMV0 189 aa10.79□□□□□ -0.68
ACTN1-204ENST00000438964 RTL8BQ17RB0 113 aa10.79□□□□□ -0.68
ACTN1-204ENST00000438964 TMEM97Q5BJF2 176 aa10.79□□□□□ -0.68
ACTN1-204ENST00000438964 FAM71F2Q6NXP2 309 aa10.79□□□□□ -0.68
ACTN1-204ENST00000438964 PRNTQ86SH4 94 aa10.79□□□□□ -0.68
ACTN1-204ENST00000438964 EXOC3-AS1Q8N2X6 119 aa10.79□□□□□ -0.68
ACTN1-204ENST00000438964 MTURNQ8N3F0 131 aa10.79□□□□□ -0.68
ACTN1-204ENST00000438964 NTN3O00634 580 aaPredicted RBP10.79□□□□□ -0.68
ACTN1-204ENST00000438964 HLA-DRB1P01911 266 aa10.79□□□□□ -0.68
ACTN1-204ENST00000438964 COL8A1P27658 744 aa10.79□□□□□ -0.68
ACTN1-204ENST00000438964 HIST1H1AQ02539 215 aaPredicted RBP10.79□□□□□ -0.68
ACTN1-204ENST00000438964 C5orf17Q8NAS9 161 aa10.79□□□□□ -0.68
ACTN1-204ENST00000438964 PERPQ96FX8 193 aa10.79□□□□□ -0.68
ACTN1-204ENST00000438964 HARBI1Q96MB7 349 aa10.79□□□□□ -0.68
ACTN1-204ENST00000438964 C7orf69Q9H7B7 122 aa10.79□□□□□ -0.68
ACTN1-204ENST00000438964 TPSG1Q9NRR2 321 aa10.79□□□□□ -0.68
ACTN1-204ENST00000438964 PILRBQ9UKJ0 227 aa10.79□□□□□ -0.68
ACTN1-204ENST00000438964 EPDR1Q9UM22 224 aa10.79□□□□□ -0.68
ACTN1-204ENST00000438964 TRGV5A0A0B4J1U4 118 aa10.78□□□□□ -0.68
ACTN1-204ENST00000438964 PSMB11A5LHX3 300 aa10.78□□□□□ -0.68
ACTN1-204ENST00000438964 UPK2O00526 184 aa10.78□□□□□ -0.68
ACTN1-204ENST00000438964 MGST3O14880 152 aa10.78□□□□□ -0.68
ACTN1-204ENST00000438964 NMUP48645 174 aa10.78□□□□□ -0.68
ACTN1-204ENST00000438964 NHLH1Q02575 133 aa10.78□□□□□ -0.68
ACTN1-204ENST00000438964 WT1-ASQ06250 92 aa10.78□□□□□ -0.68
ACTN1-204ENST00000438964 ZCCHC24Q8N2G6 241 aaKnown RBP10.78□□□□□ -0.68
ACTN1-204ENST00000438964 SERTM2A0A1B0GWG4 89 aa10.78□□□□□ -0.68
ACTN1-204ENST00000438964 FNDC10F2Z333 226 aa10.78□□□□□ -0.68
ACTN1-204ENST00000438964 CYC1P08574 325 aa10.78□□□□□ -0.68
ACTN1-204ENST00000438964 OR5AL1P0C617 328 aa10.78□□□□□ -0.68
ACTN1-204ENST00000438964 ARMS2P0C7Q2 107 aa10.78□□□□□ -0.68
ACTN1-204ENST00000438964 PRR7Q8TB68 274 aa10.78□□□□□ -0.68
ACTN1-204ENST00000438964 H1FXQ92522 213 aaKnown RBP10.78□□□□□ -0.68
ACTN1-204ENST00000438964 GTSF1LQ9H1H1 148 aa10.78□□□□□ -0.68
ACTN1-204ENST00000438964 DSCAML1Q8TD84 2053 aa10.78□□□□□ -0.68
ACTN1-204ENST00000438964 FAM90A9PA6NNJ1 464 aa10.77□□□□□ -0.68
ACTN1-204ENST00000438964 CFHR2P36980 270 aa10.77□□□□□ -0.68
ACTN1-204ENST00000438964 PCP2Q8IVA1 136 aa10.77□□□□□ -0.68
ACTN1-204ENST00000438964 MRPL20Q9BYC9 149 aaKnown RBP10.77□□□□□ -0.68
ACTN1-204ENST00000438964 KIR3DS1Q14943 382 aa10.77□□□□□ -0.69
ACTN1-204ENST00000438964 PRNDQ9UKY0 176 aa10.77□□□□□ -0.69
ACTN1-204ENST00000438964 ZGRF1Q86YA3 2104 aa10.77□□□□□ -0.69
ACTN1-204ENST00000438964 K7ERJ3 54 aa10.76□□□□□ -0.69
ACTN1-204ENST00000438964 CRXO43186 299 aaPredicted RBP10.76□□□□□ -0.69
ACTN1-204ENST00000438964 LIPFP07098 398 aa10.76□□□□□ -0.69
ACTN1-204ENST00000438964 IFI27P40305 119 aaPredicted RBP10.76□□□□□ -0.69
ACTN1-204ENST00000438964 PRSS3P2Q8NHM4 247 aa10.76□□□□□ -0.69
ACTN1-204ENST00000438964 SIT1Q9Y3P8 196 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms