RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 J3QRE1 110 aa1.2□□□□□ -2.22
HMGB1P31-201ENST00000437242 PFDN6O15212 129 aa1.2□□□□□ -2.22
HMGB1P31-201ENST00000437242 DENRO43583 198 aaKnown RBP1.2□□□□□ -2.22
HMGB1P31-201ENST00000437242 SCN2BO60939 215 aa1.2□□□□□ -2.22
HMGB1P31-201ENST00000437242 IGHV1-69P01742 117 aa1.2□□□□□ -2.22
HMGB1P31-201ENST00000437242 CRYBA1P05813 215 aa1.2□□□□□ -2.22
HMGB1P31-201ENST00000437242 GUSBP08236 651 aa1.2□□□□□ -2.22
HMGB1P31-201ENST00000437242 CD79AP11912 226 aa1.2□□□□□ -2.22
HMGB1P31-201ENST00000437242 CBR1P16152 277 aa1.2□□□□□ -2.22
HMGB1P31-201ENST00000437242 CTLA4P16410 223 aa1.2□□□□□ -2.22
HMGB1P31-201ENST00000437242 TMEM33P57088 247 aa1.2□□□□□ -2.22
HMGB1P31-201ENST00000437242 BLCAPP62952 87 aa1.2□□□□□ -2.22
HMGB1P31-201ENST00000437242 HOXC5Q00444 222 aa1.2□□□□□ -2.22
HMGB1P31-201ENST00000437242 EMX2Q04743 252 aa1.2□□□□□ -2.22
HMGB1P31-201ENST00000437242 DEFB136Q30KP8 78 aa1.2□□□□□ -2.22
HMGB1P31-201ENST00000437242 LAIR2Q6ISS4 152 aa1.2□□□□□ -2.22
HMGB1P31-201ENST00000437242 LINC00299Q6ZSB3 139 aa1.2□□□□□ -2.22
HMGB1P31-201ENST00000437242 LYPD6Q86Y78 171 aa1.2□□□□□ -2.22
HMGB1P31-201ENST00000437242 FUNDC1Q8IVP5 155 aa1.2□□□□□ -2.22
HMGB1P31-201ENST00000437242 FAM9CQ8IZT9 166 aa1.2□□□□□ -2.22
HMGB1P31-201ENST00000437242 C4orf33Q8N1A6 199 aa1.2□□□□□ -2.22
HMGB1P31-201ENST00000437242 C10orf111Q8N326 155 aa1.2□□□□□ -2.22
HMGB1P31-201ENST00000437242 TCAIMQ8N3R3 496 aa1.2□□□□□ -2.22
HMGB1P31-201ENST00000437242 C17orf78Q8N4C9 275 aa1.2□□□□□ -2.22
HMGB1P31-201ENST00000437242 NATD1Q8N6N6 113 aa1.2□□□□□ -2.22
HMGB1P31-201ENST00000437242 WFDC9Q8NEX5 89 aa1.2□□□□□ -2.22
HMGB1P31-201ENST00000437242 SLC25A40Q8TBP6 338 aa1.2□□□□□ -2.22
HMGB1P31-201ENST00000437242 OR5P2Q8WZ92 322 aa1.2□□□□□ -2.22
HMGB1P31-201ENST00000437242 OR5P3Q8WZ94 311 aa1.2□□□□□ -2.22
HMGB1P31-201ENST00000437242 GTF2H4Q92759 462 aa1.2□□□□□ -2.22
HMGB1P31-201ENST00000437242 MAL2Q969L2 176 aa1.2□□□□□ -2.22
HMGB1P31-201ENST00000437242 TESCQ96BS2 214 aa1.2□□□□□ -2.22
HMGB1P31-201ENST00000437242 ROPN1LQ96C74 230 aa1.2□□□□□ -2.22
HMGB1P31-201ENST00000437242 REEP6Q96HR9 211 aa1.2□□□□□ -2.22
HMGB1P31-201ENST00000437242 TEX37Q96LM6 180 aa1.2□□□□□ -2.22
HMGB1P31-201ENST00000437242 HOPXQ9BPY8 73 aaPredicted RBP1.2□□□□□ -2.22
HMGB1P31-201ENST00000437242 WFDC6Q9BQY6 131 aa1.2□□□□□ -2.22
HMGB1P31-201ENST00000437242 CDCA4Q9BXL8 241 aa1.2□□□□□ -2.22
HMGB1P31-201ENST00000437242 EFCAB1Q9HAE3 211 aa1.2□□□□□ -2.22
HMGB1P31-201ENST00000437242 BATF3Q9NR55 127 aa1.2□□□□□ -2.22
HMGB1P31-201ENST00000437242 ARMC1Q9NVT9 282 aa1.2□□□□□ -2.22
HMGB1P31-201ENST00000437242 MS4A12Q9NXJ0 267 aa1.2□□□□□ -2.22
HMGB1P31-201ENST00000437242 TAS2R7Q9NYW3 318 aa1.2□□□□□ -2.22
HMGB1P31-201ENST00000437242 MRM2Q9UI43 246 aaKnown RBP1.2□□□□□ -2.22
HMGB1P31-201ENST00000437242 PCTPQ9UKL6 214 aa1.2□□□□□ -2.22
HMGB1P31-201ENST00000437242 POMPQ9Y244 141 aa1.2□□□□□ -2.22
HMGB1P31-201ENST00000437242 NDUFAF1Q9Y375 327 aa1.2□□□□□ -2.22
HMGB1P31-201ENST00000437242 POLR3HQ9Y535 204 aaPredicted RBP1.2□□□□□ -2.22
HMGB1P31-201ENST00000437242 TIMM22Q9Y584 194 aa1.2□□□□□ -2.22
HMGB1P31-201ENST00000437242 DNAJC15Q9Y5T4 150 aa1.2□□□□□ -2.22
HMGB1P31-201ENST00000437242 DSCAML1Q8TD84 2053 aa1.2□□□□□ -2.22
HMGB1P31-201ENST00000437242 LRP1Q07954 4544 aaKnown RBP1.2□□□□□ -2.22
HMGB1P31-201ENST00000437242 IGKV1D-42A0A075B6H8 117 aa1.19□□□□□ -2.22
HMGB1P31-201ENST00000437242 TMED7-TICAM2A0A0A6YYA0 188 aa1.19□□□□□ -2.22
HMGB1P31-201ENST00000437242 A0A1B0GX12 115 aa1.19□□□□□ -2.22
HMGB1P31-201ENST00000437242 A0A1W2PNM2 257 aa1.19□□□□□ -2.22
HMGB1P31-201ENST00000437242 ZNF878C9JN71 531 aa1.19□□□□□ -2.22
HMGB1P31-201ENST00000437242 FTCDNL1E5RQL4 147 aa1.19□□□□□ -2.22
HMGB1P31-201ENST00000437242 BOLA2-SMG1P6H3BVE0 249 aa1.19□□□□□ -2.22
HMGB1P31-201ENST00000437242 FXYD1O00168 92 aa1.19□□□□□ -2.22
HMGB1P31-201ENST00000437242 AZIN1O14977 448 aa1.19□□□□□ -2.22
HMGB1P31-201ENST00000437242 MRPS14O60783 128 aaKnown RBP1.19□□□□□ -2.22
HMGB1P31-201ENST00000437242 SH2D1AO60880 128 aa1.19□□□□□ -2.22
HMGB1P31-201ENST00000437242 BRI3O95415 125 aa1.19□□□□□ -2.22
HMGB1P31-201ENST00000437242 ATP6V1G2O95670 118 aa1.19□□□□□ -2.22
HMGB1P31-201ENST00000437242 LY6G6CO95867 125 aa1.19□□□□□ -2.22
HMGB1P31-201ENST00000437242 HMGN2P05204 90 aaKnown RBP1.19□□□□□ -2.22
HMGB1P31-201ENST00000437242 NEFHP12036 1026 aa1.19□□□□□ -2.22
HMGB1P31-201ENST00000437242 COX4I1P13073 169 aa1.19□□□□□ -2.22
HMGB1P31-201ENST00000437242 IDO1P14902 403 aa1.19□□□□□ -2.22
HMGB1P31-201ENST00000437242 NQO2P16083 231 aa1.19□□□□□ -2.22
HMGB1P31-201ENST00000437242 SPNP16150 400 aa1.19□□□□□ -2.22
HMGB1P31-201ENST00000437242 AKR1C4P17516 323 aa1.19□□□□□ -2.22
HMGB1P31-201ENST00000437242 GPX2P18283 190 aa1.19□□□□□ -2.22
HMGB1P31-201ENST00000437242 CD24P25063 80 aa1.19□□□□□ -2.22
HMGB1P31-201ENST00000437242 LCN1P31025 176 aa1.19□□□□□ -2.22
HMGB1P31-201ENST00000437242 GLRXP35754 106 aa1.19□□□□□ -2.22
HMGB1P31-201ENST00000437242 MAGEA2P43356 314 aa1.19□□□□□ -2.22
HMGB1P31-201ENST00000437242 INPP1P49441 399 aa1.19□□□□□ -2.22
HMGB1P31-201ENST00000437242 UBE2KP61086 200 aa1.19□□□□□ -2.22
HMGB1P31-201ENST00000437242 ARF6P62330 175 aa1.19□□□□□ -2.22
HMGB1P31-201ENST00000437242 FLOT2Q14254 428 aa1.19□□□□□ -2.22
HMGB1P31-201ENST00000437242 SNCBQ16143 134 aa1.19□□□□□ -2.22
HMGB1P31-201ENST00000437242 KRTAP13-4Q3LI77 160 aa1.19□□□□□ -2.22
HMGB1P31-201ENST00000437242 OGFRL1Q5TC84 451 aaPredicted RBP1.19□□□□□ -2.22
HMGB1P31-201ENST00000437242 ELP2Q6IA86 826 aa1.19□□□□□ -2.22
HMGB1P31-201ENST00000437242 LCN8Q6JVE9 175 aa1.19□□□□□ -2.22
HMGB1P31-201ENST00000437242 NOXRED1Q6NXP6 359 aa1.19□□□□□ -2.22
HMGB1P31-201ENST00000437242 C3orf33Q6P1S2 294 aa1.19□□□□□ -2.22
HMGB1P31-201ENST00000437242 VMO1Q7Z5L0 202 aa1.19□□□□□ -2.22
HMGB1P31-201ENST00000437242 ARPINQ7Z6K5 226 aa1.19□□□□□ -2.22
HMGB1P31-201ENST00000437242 LRRC28Q86X40 367 aaPredicted RBP1.19□□□□□ -2.22
HMGB1P31-201ENST00000437242 CTAGE3PQ8IX95 158 aa1.19□□□□□ -2.22
HMGB1P31-201ENST00000437242 CLECL1Q8IZS7 167 aa1.19□□□□□ -2.22
HMGB1P31-201ENST00000437242 OR5AS1Q8N127 324 aa1.19□□□□□ -2.22
HMGB1P31-201ENST00000437242 LINC00471Q8N535 108 aa1.19□□□□□ -2.22
HMGB1P31-201ENST00000437242 KRTCAP2Q8N6L1 136 aa1.19□□□□□ -2.22
HMGB1P31-201ENST00000437242 PACRGLQ8N7B6 248 aa1.19□□□□□ -2.22
HMGB1P31-201ENST00000437242 ZNF283Q8N7M2 679 aa1.19□□□□□ -2.22
HMGB1P31-201ENST00000437242 CLDN22Q8N7P3 220 aa1.19□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms