RNA–Protein interactions for RNA: ENST00000435050.1

CLDN4-203, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-203ENST00000435050 PDLIM4P50479 330 aa9.75□□□□□ -0.85
CLDN4-203ENST00000435050 RPL11P62913 178 aaKnown RBP9.75□□□□□ -0.85
CLDN4-203ENST00000435050 PMS2P11Q13670 270 aa9.75□□□□□ -0.85
CLDN4-203ENST00000435050 OR1L6Q8NGR2 347 aa9.75□□□□□ -0.85
CLDN4-203ENST00000435050 FAM168AQ92567 244 aa9.75□□□□□ -0.85
CLDN4-203ENST00000435050 ARPC1AQ92747 370 aa9.75□□□□□ -0.85
CLDN4-203ENST00000435050 GRIFINA4D1Z8 144 aa9.75□□□□□ -0.85
CLDN4-203ENST00000435050 PSG1P11464 419 aa9.75□□□□□ -0.85
CLDN4-203ENST00000435050 PRTN3P24158 256 aa9.75□□□□□ -0.85
CLDN4-203ENST00000435050 IBA57Q5T440 356 aaKnown RBP9.75□□□□□ -0.85
CLDN4-203ENST00000435050 ST6GALNAC6Q969X2 333 aa9.75□□□□□ -0.85
CLDN4-203ENST00000435050 MRPL32Q9BYC8 188 aaKnown RBP9.75□□□□□ -0.85
CLDN4-203ENST00000435050 TSTD3H0UI37 97 aa9.75□□□□□ -0.85
CLDN4-203ENST00000435050 SCGB1D1O95968 90 aa9.75□□□□□ -0.85
CLDN4-203ENST00000435050 ZNF841Q6ZN19 808 aa9.75□□□□□ -0.85
CLDN4-203ENST00000435050 BEND2Q8NDZ0 799 aa9.75□□□□□ -0.85
CLDN4-203ENST00000435050 NOTCH3Q9UM47 2321 aa9.75□□□□□ -0.85
CLDN4-203ENST00000435050 IGKV3-7A0A075B6H7 116 aa9.74□□□□□ -0.85
CLDN4-203ENST00000435050 CX3CL1P78423 397 aa9.74□□□□□ -0.85
CLDN4-203ENST00000435050 PRR20EP86478 221 aa9.74□□□□□ -0.85
CLDN4-203ENST00000435050 PRR20CP86479 221 aa9.74□□□□□ -0.85
CLDN4-203ENST00000435050 PRR20DP86480 221 aa9.74□□□□□ -0.85
CLDN4-203ENST00000435050 PRR20BP86481 221 aa9.74□□□□□ -0.85
CLDN4-203ENST00000435050 PRR20AP86496 221 aa9.74□□□□□ -0.85
CLDN4-203ENST00000435050 PRNTQ86SH4 94 aa9.74□□□□□ -0.85
CLDN4-203ENST00000435050 OR1P1Q8NH06 330 aa9.74□□□□□ -0.85
CLDN4-203ENST00000435050 LINC00574Q9H8X3 128 aa9.74□□□□□ -0.85
CLDN4-203ENST00000435050 ZZEF1O43149 2961 aa9.74□□□□□ -0.85
CLDN4-203ENST00000435050 ELOA3CA0A087WX78 387 aaPredicted RBP9.74□□□□□ -0.85
CLDN4-203ENST00000435050 IGHV3-66A0A0C4DH42 116 aa9.74□□□□□ -0.85
CLDN4-203ENST00000435050 IGLV1-47P01700 117 aa9.74□□□□□ -0.85
CLDN4-203ENST00000435050 ITLN2Q8WWU7 325 aaPredicted RBP9.74□□□□□ -0.85
CLDN4-203ENST00000435050 TET2Q6N021 2002 aaPredicted RBP9.74□□□□□ -0.85
CLDN4-203ENST00000435050 NAV2Q8IVL1 2488 aa9.74□□□□□ -0.85
CLDN4-203ENST00000435050 IGLV2-23P01705 113 aa9.74□□□□□ -0.85
CLDN4-203ENST00000435050 DLX6P56179 175 aa9.74□□□□□ -0.85
CLDN4-203ENST00000435050 FAM71F2Q6NXP2 309 aa9.74□□□□□ -0.85
CLDN4-203ENST00000435050 C19orf24Q9BVV8 132 aa9.74□□□□□ -0.85
CLDN4-203ENST00000435050 F11RQ9Y624 299 aaKnown RBP9.74□□□□□ -0.85
CLDN4-203ENST00000435050 ZNF462Q96JM2 2506 aa9.74□□□□□ -0.85
CLDN4-203ENST00000435050 IGLC7A0M8Q6 106 aa9.74□□□□□ -0.85
CLDN4-203ENST00000435050 OR2T8A6NH00 312 aa9.74□□□□□ -0.85
CLDN4-203ENST00000435050 STXBP6Q8NFX7 210 aa9.74□□□□□ -0.85
CLDN4-203ENST00000435050 ASCL2Q99929 193 aa9.74□□□□□ -0.85
CLDN4-203ENST00000435050 SRD5A3Q9H8P0 318 aa9.74□□□□□ -0.85
CLDN4-203ENST00000435050 TRAV40A0A0B4J280 105 aa9.73□□□□□ -0.85
CLDN4-203ENST00000435050 ZNF785A8K8V0 405 aa9.73□□□□□ -0.85
CLDN4-203ENST00000435050 NTF3P20783 257 aa9.73□□□□□ -0.85
CLDN4-203ENST00000435050 BTF3L4Q96K17 158 aa9.73□□□□□ -0.85
CLDN4-203ENST00000435050 PIMREGQ9BSJ6 248 aa9.73□□□□□ -0.85
CLDN4-203ENST00000435050 C5orf52A6NGY3 159 aa9.73□□□□□ -0.85
CLDN4-203ENST00000435050 PHOX2AO14813 284 aa9.73□□□□□ -0.85
CLDN4-203ENST00000435050 ZNF207O43670 478 aaKnown RBP9.73□□□□□ -0.85
CLDN4-203ENST00000435050 FOLR2P14207 255 aa9.73□□□□□ -0.85
CLDN4-203ENST00000435050 ZFP36P26651 326 aaKnown RBP9.73□□□□□ -0.85
CLDN4-203ENST00000435050 C5orf64Q2M2E5 130 aa9.73□□□□□ -0.85
CLDN4-203ENST00000435050 TEX38Q6PEX7 206 aa9.73□□□□□ -0.85
CLDN4-203ENST00000435050 GOLT1AQ6ZVE7 132 aa9.73□□□□□ -0.85
CLDN4-203ENST00000435050 Q8N7P7 452 aa9.73□□□□□ -0.85
CLDN4-203ENST00000435050 USP9XQ93008 2570 aaPredicted RBP9.73□□□□□ -0.85
CLDN4-203ENST00000435050 BTF3P20290 206 aaKnown RBP9.73□□□□□ -0.85
CLDN4-203ENST00000435050 SRP14P37108 136 aaKnown RBP9.73□□□□□ -0.85
CLDN4-203ENST00000435050 MFAP4P55083 255 aa9.73□□□□□ -0.85
CLDN4-203ENST00000435050 RUSC1-AS1Q66K80 236 aa9.73□□□□□ -0.85
CLDN4-203ENST00000435050 NRGNQ92686 78 aa9.73□□□□□ -0.85
CLDN4-203ENST00000435050 PACRGQ96M98 296 aaPredicted RBP9.73□□□□□ -0.85
CLDN4-203ENST00000435050 TMSB15BA0A087X1C1 80 aa9.72□□□□□ -0.85
CLDN4-203ENST00000435050 A0A1W2PPR1 153 aa9.72□□□□□ -0.85
CLDN4-203ENST00000435050 A6NNC1 897 aa9.72□□□□□ -0.85
CLDN4-203ENST00000435050 K7EQM0 130 aa9.72□□□□□ -0.85
CLDN4-203ENST00000435050 SAA4P35542 130 aa9.72□□□□□ -0.85
CLDN4-203ENST00000435050 CSN1S1P47710 185 aa9.72□□□□□ -0.85
CLDN4-203ENST00000435050 C11orf42Q8N5U0 333 aa9.72□□□□□ -0.85
CLDN4-203ENST00000435050 GSN-AS1Q9NRJ2 163 aa9.72□□□□□ -0.85
CLDN4-203ENST00000435050 FBXL7Q9UJT9 491 aa9.72□□□□□ -0.85
CLDN4-203ENST00000435050 PRSS46E5RG02 174 aa9.72□□□□□ -0.85
CLDN4-203ENST00000435050 PEX7O00628 323 aa9.72□□□□□ -0.85
CLDN4-203ENST00000435050 AMY1AP04745 511 aa9.72□□□□□ -0.85
CLDN4-203ENST00000435050 GPR183P32249 361 aa9.72□□□□□ -0.85
CLDN4-203ENST00000435050 MFAP2P55001 183 aa9.72□□□□□ -0.85
CLDN4-203ENST00000435050 S100A7AQ86SG5 101 aa9.72□□□□□ -0.85
CLDN4-203ENST00000435050 PRO1933Q9H354 126 aa9.72□□□□□ -0.85
CLDN4-203ENST00000435050 GGTLC3B5MD39 225 aa9.72□□□□□ -0.85
CLDN4-203ENST00000435050 BATFQ16520 125 aa9.72□□□□□ -0.85
CLDN4-203ENST00000435050 MAPK1IP1LQ8NDC0 245 aa9.72□□□□□ -0.85
CLDN4-203ENST00000435050 AAMDCQ9H7C9 122 aa9.72□□□□□ -0.85
CLDN4-203ENST00000435050 M0R1W7 72 aa9.71□□□□□ -0.85
CLDN4-203ENST00000435050 VPS25Q9BRG1 176 aa9.71□□□□□ -0.85
CLDN4-203ENST00000435050 C21orf62Q9NYP8 219 aa9.71□□□□□ -0.85
CLDN4-203ENST00000435050 MAS1LP35410 378 aa9.71□□□□□ -0.85
CLDN4-203ENST00000435050 CDX1P47902 265 aaPredicted RBP9.71□□□□□ -0.85
CLDN4-203ENST00000435050 BPIFA4PQ86YQ2 179 aa9.71□□□□□ -0.85
CLDN4-203ENST00000435050 C7orf69Q9H7B7 122 aa9.71□□□□□ -0.85
CLDN4-203ENST00000435050 PITPNC1Q9UKF7 332 aa9.71□□□□□ -0.85
CLDN4-203ENST00000435050 CENPEQ02224 2701 aa9.71□□□□□ -0.85
CLDN4-203ENST00000435050 CT45A10P0DMU9 189 aa9.71□□□□□ -0.86
CLDN4-203ENST00000435050 CRISP2P16562 243 aa9.71□□□□□ -0.86
CLDN4-203ENST00000435050 COL8A1P27658 744 aa9.71□□□□□ -0.86
CLDN4-203ENST00000435050 ZNF137PP52743 207 aa9.71□□□□□ -0.86
CLDN4-203ENST00000435050 EXOC3-AS1Q8N2X6 119 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 188.7 ms