RNA–Protein interactions for RNA: ENST00000434407.6

HLA-F-220, Transcript of major histocompatibility complex, class I, F, humanhuman

BASIC

Gene HLA-F, Length 884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-220ENST00000434407 A0A1W2PS18 150 aa13.73□□□□□ -0.21
HLA-F-220ENST00000434407 ZFP92A6NM28 416 aa13.73□□□□□ -0.21
HLA-F-220ENST00000434407 FNDC10F2Z333 226 aa13.73□□□□□ -0.21
HLA-F-220ENST00000434407 CCNKO75909 580 aa13.73□□□□□ -0.21
HLA-F-220ENST00000434407 BCAP31P51572 246 aa13.73□□□□□ -0.21
HLA-F-220ENST00000434407 ZNF90Q03938 601 aa13.73□□□□□ -0.21
HLA-F-220ENST00000434407 USF2Q15853 346 aaPredicted RBP13.73□□□□□ -0.21
HLA-F-220ENST00000434407 ACOT7LQ6ZUV0 252 aa13.73□□□□□ -0.21
HLA-F-220ENST00000434407 OR51G1Q8NGK1 321 aa13.73□□□□□ -0.21
HLA-F-220ENST00000434407 TENM3Q9P273 2699 aa13.73□□□□□ -0.21
HLA-F-220ENST00000434407 NBEAL2Q6ZNJ1 2754 aa13.72□□□□□ -0.21
HLA-F-220ENST00000434407 IL4P05112 153 aa13.72□□□□□ -0.21
HLA-F-220ENST00000434407 METTL15P1P0C7V9 234 aa13.72□□□□□ -0.21
HLA-F-220ENST00000434407 NHLRC4P0CG21 123 aaPredicted RBP13.72□□□□□ -0.21
HLA-F-220ENST00000434407 DLK1P80370 383 aa13.72□□□□□ -0.21
HLA-F-220ENST00000434407 TMEM144Q7Z5S9 345 aa13.72□□□□□ -0.21
HLA-F-220ENST00000434407 FAM110AQ9BQ89 295 aa13.72□□□□□ -0.21
HLA-F-220ENST00000434407 TMEM231Q9H6L2 316 aa13.72□□□□□ -0.21
HLA-F-220ENST00000434407 LSM5Q9Y4Y9 91 aaKnown RBP13.72□□□□□ -0.21
HLA-F-220ENST00000434407 OR11H12B2RN74 326 aa13.71□□□□□ -0.21
HLA-F-220ENST00000434407 FABP1P07148 127 aa13.71□□□□□ -0.21
HLA-F-220ENST00000434407 HNRNPCP07910 306 aaKnown RBP eCLIP13.71□□□□□ -0.21
HLA-F-220ENST00000434407 RAB32Q13637 225 aa13.71□□□□□ -0.21
HLA-F-220ENST00000434407 OR8G2PQ6IF36 304 aa13.71□□□□□ -0.21
HLA-F-220ENST00000434407 LINC00322Q6ZN03 302 aaPredicted RBP13.71□□□□□ -0.21
HLA-F-220ENST00000434407 TCF24Q7RTU0 167 aa13.71□□□□□ -0.21
HLA-F-220ENST00000434407 SBSPONQ8IVN8 264 aa13.71□□□□□ -0.21
HLA-F-220ENST00000434407 NMES1Q9C002 83 aa13.71□□□□□ -0.21
HLA-F-220ENST00000434407 L7N2F9 121 aa13.7□□□□□ -0.22
HLA-F-220ENST00000434407 GOSR2O14653 212 aa13.7□□□□□ -0.22
HLA-F-220ENST00000434407 DFFBO76075 338 aa13.7□□□□□ -0.22
HLA-F-220ENST00000434407 SIX6O95475 246 aa13.7□□□□□ -0.22
HLA-F-220ENST00000434407 VAMP2P63027 116 aa13.7□□□□□ -0.22
HLA-F-220ENST00000434407 ARL16Q0P5N6 197 aa13.7□□□□□ -0.22
HLA-F-220ENST00000434407 DEFB125Q8N687 156 aa13.7□□□□□ -0.22
HLA-F-220ENST00000434407 OR10P1Q8NGE3 313 aa13.7□□□□□ -0.22
HLA-F-220ENST00000434407 RNF125Q96EQ8 232 aa13.7□□□□□ -0.22
HLA-F-220ENST00000434407 GGACTQ9BVM4 153 aa13.7□□□□□ -0.22
HLA-F-220ENST00000434407 WFDC10AQ9H1F0 79 aa13.7□□□□□ -0.22
HLA-F-220ENST00000434407 ALG5Q9Y673 324 aa13.7□□□□□ -0.22
HLA-F-220ENST00000434407 TRAV2A0A0B4J234 112 aa13.69□□□□□ -0.22
HLA-F-220ENST00000434407 IGHV3-66A0A0C4DH42 116 aa13.69□□□□□ -0.22
HLA-F-220ENST00000434407 OR4C46A6NHA9 309 aa13.69□□□□□ -0.22
HLA-F-220ENST00000434407 PFDN1O60925 122 aa13.69□□□□□ -0.22
HLA-F-220ENST00000434407 P2RY1P47900 373 aa13.69□□□□□ -0.22
HLA-F-220ENST00000434407 C16orf54Q6UWD8 224 aa13.69□□□□□ -0.22
HLA-F-220ENST00000434407 GLMPQ8WWB7 406 aa13.69□□□□□ -0.22
HLA-F-220ENST00000434407 NARS2Q96I59 477 aaKnown RBP13.69□□□□□ -0.22
HLA-F-220ENST00000434407 ASCL2Q99929 193 aa13.69□□□□□ -0.22
HLA-F-220ENST00000434407 TUBA4BQ9H853 241 aa13.69□□□□□ -0.22
HLA-F-220ENST00000434407 BUB3O43684 328 aa13.68□□□□□ -0.22
HLA-F-220ENST00000434407 DEDDO75618 318 aa13.68□□□□□ -0.22
HLA-F-220ENST00000434407 CFDP00746 253 aaPredicted RBP13.68□□□□□ -0.22
HLA-F-220ENST00000434407 PVALBP20472 110 aaPredicted RBP13.68□□□□□ -0.22
HLA-F-220ENST00000434407 H2BFSP57053 126 aa13.68□□□□□ -0.22
HLA-F-220ENST00000434407 CYCSP99999 105 aaKnown RBP13.68□□□□□ -0.22
HLA-F-220ENST00000434407 AKR1C1Q04828 323 aa13.68□□□□□ -0.22
HLA-F-220ENST00000434407 ODF3L2Q3SX64 289 aa13.68□□□□□ -0.22
HLA-F-220ENST00000434407 LYRM2Q9NU23 88 aaPredicted RBP13.68□□□□□ -0.22
HLA-F-220ENST00000434407 RABAC1Q9UI14 185 aa13.68□□□□□ -0.22
HLA-F-220ENST00000434407 RBMY1BA6NDE4 496 aaKnown RBP13.67□□□□□ -0.22
HLA-F-220ENST00000434407 RBMY1EA6NEQ0 496 aaKnown RBP13.67□□□□□ -0.22
HLA-F-220ENST00000434407 RBMY1DP0C7P1 496 aaKnown RBP13.67□□□□□ -0.22
HLA-F-220ENST00000434407 EIF2B2P49770 351 aaKnown RBP13.67□□□□□ -0.22
HLA-F-220ENST00000434407 S100A10P60903 97 aa13.67□□□□□ -0.22
HLA-F-220ENST00000434407 PAFAH1B2P68402 229 aa13.67□□□□□ -0.22
HLA-F-220ENST00000434407 STPG3Q8N7X2 389 aa13.67□□□□□ -0.22
HLA-F-220ENST00000434407 GRAMD2BQ96HH9 432 aa13.67□□□□□ -0.22
HLA-F-220ENST00000434407 MS4A6AQ9H2W1 248 aa13.67□□□□□ -0.22
HLA-F-220ENST00000434407 SRD5A3Q9H8P0 318 aa13.67□□□□□ -0.22
HLA-F-220ENST00000434407 NPVFQ9HCQ7 196 aa13.67□□□□□ -0.22
HLA-F-220ENST00000434407 FAM24AA6NFZ4 105 aa13.66□□□□□ -0.22
HLA-F-220ENST00000434407 SSNA1O43805 119 aa13.66□□□□□ -0.22
HLA-F-220ENST00000434407 RRAS2P62070 204 aaPredicted RBP13.66□□□□□ -0.22
HLA-F-220ENST00000434407 OR2F1Q13607 317 aa13.66□□□□□ -0.22
HLA-F-220ENST00000434407 TMEM182Q6ZP80 229 aaPredicted RBP13.66□□□□□ -0.22
HLA-F-220ENST00000434407 CHAC2Q8WUX2 184 aa13.66□□□□□ -0.22
HLA-F-220ENST00000434407 CITED4Q96RK1 184 aa13.66□□□□□ -0.22
HLA-F-220ENST00000434407 TM2D3Q9BRN9 247 aa13.66□□□□□ -0.22
HLA-F-220ENST00000434407 AGRNO00468 2067 aa13.65□□□□□ -0.22
HLA-F-220ENST00000434407 IGKV3-7A0A075B6H7 116 aa13.65□□□□□ -0.22
HLA-F-220ENST00000434407 SMCO3A2RU48 225 aa13.65□□□□□ -0.22
HLA-F-220ENST00000434407 NUP62P37198 522 aaPredicted RBP13.65□□□□□ -0.22
HLA-F-220ENST00000434407 CAV2P51636 162 aa13.65□□□□□ -0.22
HLA-F-220ENST00000434407 CMC4P56277 68 aaPredicted RBP13.65□□□□□ -0.22
HLA-F-220ENST00000434407 LYZP61626 148 aa13.65□□□□□ -0.22
HLA-F-220ENST00000434407 HAGHQ16775 308 aa13.65□□□□□ -0.22
HLA-F-220ENST00000434407 CYP2G1PQ6ZSU1 146 aa13.65□□□□□ -0.22
HLA-F-220ENST00000434407 GBGT1Q8N5D6 347 aa13.65□□□□□ -0.22
HLA-F-220ENST00000434407 TMEM252Q8N6L7 170 aa13.65□□□□□ -0.22
HLA-F-220ENST00000434407 PBDC1Q9BVG4 233 aa13.65□□□□□ -0.22
HLA-F-220ENST00000434407 MGAT4CQ9UBM8 478 aa13.65□□□□□ -0.22
HLA-F-220ENST00000434407 SLC45A2Q9UMX9 530 aa13.65□□□□□ -0.22
HLA-F-220ENST00000434407 IGSF23A1L1A6 192 aa13.64□□□□□ -0.23
HLA-F-220ENST00000434407 HELTA6NFD8 242 aa13.64□□□□□ -0.23
HLA-F-220ENST00000434407 H0YIZ8 118 aa13.64□□□□□ -0.23
HLA-F-220ENST00000434407 CST7O76096 145 aa13.64□□□□□ -0.23
HLA-F-220ENST00000434407 GATA2P23769 480 aaPredicted RBP13.64□□□□□ -0.23
HLA-F-220ENST00000434407 SULT1A1P50225 295 aa13.64□□□□□ -0.23
HLA-F-220ENST00000434407 SELENOTP62341 195 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms