RNA–Protein interactions for RNA: ENST00000430328.6

RIF1-204, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,992 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-204ENST00000430328 C17orf98A8MV24 154 aa13.76□□□□□ -0.21
RIF1-204ENST00000430328 TEX38Q6PEX7 206 aa13.76□□□□□ -0.21
RIF1-204ENST00000430328 FCN3O75636 299 aa13.76□□□□□ -0.21
RIF1-204ENST00000430328 ROS1P08922 2347 aa13.76□□□□□ -0.21
RIF1-204ENST00000430328 C15orf61A6NNL5 157 aa13.75□□□□□ -0.21
RIF1-204ENST00000430328 LCNL1Q6ZST4 164 aa13.75□□□□□ -0.21
RIF1-204ENST00000430328 SPSB2Q99619 263 aa13.75□□□□□ -0.21
RIF1-204ENST00000430328 A0A1W2PPV9 198 aa13.75□□□□□ -0.21
RIF1-204ENST00000430328 C8orf46Q8TAG6 207 aa13.75□□□□□ -0.21
RIF1-204ENST00000430328 WBP1LQ9NX94 342 aa13.75□□□□□ -0.21
RIF1-204ENST00000430328 CD200R1LQ6Q8B3 271 aa13.75□□□□□ -0.21
RIF1-204ENST00000430328 CSTL1Q9H114 145 aa13.75□□□□□ -0.21
RIF1-204ENST00000430328 FREM1Q5H8C1 2179 aa13.75□□□□□ -0.21
RIF1-204ENST00000430328 THADAQ6YHU6 1953 aa13.75□□□□□ -0.21
RIF1-204ENST00000430328 NBR2O15453 112 aa13.75□□□□□ -0.21
RIF1-204ENST00000430328 TMEM14DPA8MWL7 114 aa13.75□□□□□ -0.21
RIF1-204ENST00000430328 FOXD3Q9UJU5 478 aaPredicted RBP13.75□□□□□ -0.21
RIF1-204ENST00000430328 PCOLCEQ15113 449 aa13.75□□□□□ -0.21
RIF1-204ENST00000430328 LY6G5BQ8NDX9 201 aa13.75□□□□□ -0.21
RIF1-204ENST00000430328 C8orf82Q6P1X6 216 aaPredicted RBP13.74□□□□□ -0.21
RIF1-204ENST00000430328 EFNB3Q15768 340 aa13.74□□□□□ -0.21
RIF1-204ENST00000430328 TMEM92Q6UXU6 159 aa13.74□□□□□ -0.21
RIF1-204ENST00000430328 GAGE7O76087 117 aa13.74□□□□□ -0.21
RIF1-204ENST00000430328 IGKV1D-16P01601 117 aa13.74□□□□□ -0.21
RIF1-204ENST00000430328 GAGE12FP0CL80 117 aa13.74□□□□□ -0.21
RIF1-204ENST00000430328 GAGE12GP0CL81 117 aa13.74□□□□□ -0.21
RIF1-204ENST00000430328 GAGE12IP0CL82 117 aa13.74□□□□□ -0.21
RIF1-204ENST00000430328 THAP8Q8NA92 274 aa13.74□□□□□ -0.21
RIF1-204ENST00000430328 FAM168AQ92567 244 aa13.74□□□□□ -0.21
RIF1-204ENST00000430328 TRGV1A0A0A0MS02 117 aa13.74□□□□□ -0.21
RIF1-204ENST00000430328 C3orf36Q3SXR2 165 aa13.74□□□□□ -0.21
RIF1-204ENST00000430328 PILRAQ9UKJ1 303 aa13.74□□□□□ -0.21
RIF1-204ENST00000430328 RPUSD1Q9UJJ7 312 aaKnown RBP13.74□□□□□ -0.21
RIF1-204ENST00000430328 NRN1LQ496H8 165 aa13.73□□□□□ -0.21
RIF1-204ENST00000430328 COLCA1Q6ZS62 124 aa13.73□□□□□ -0.21
RIF1-204ENST00000430328 IGLV1-36A0A0B4J1U3 117 aa13.73□□□□□ -0.21
RIF1-204ENST00000430328 ZNF561-AS1K7EIQ3 104 aa13.73□□□□□ -0.21
RIF1-204ENST00000430328 NEU4Q8WWR8 484 aaPredicted RBP13.73□□□□□ -0.21
RIF1-204ENST00000430328 AMELYQ99218 206 aa13.73□□□□□ -0.21
RIF1-204ENST00000430328 PAX8Q06710 450 aa13.73□□□□□ -0.21
RIF1-204ENST00000430328 FGF11Q92914 225 aa13.73□□□□□ -0.21
RIF1-204ENST00000430328 PTPRFP10586 1907 aa13.73□□□□□ -0.21
RIF1-204ENST00000430328 PYYP10082 97 aa13.73□□□□□ -0.21
RIF1-204ENST00000430328 SLAQ13239 276 aa13.73□□□□□ -0.21
RIF1-204ENST00000430328 PRSS22Q9GZN4 317 aa13.73□□□□□ -0.21
RIF1-204ENST00000430328 DOCK1Q14185 1865 aa13.73□□□□□ -0.21
RIF1-204ENST00000430328 TRBV24-1A0A075B6N3 115 aa13.73□□□□□ -0.21
RIF1-204ENST00000430328 IGHV1-45A0A0A0MS14 117 aa13.73□□□□□ -0.21
RIF1-204ENST00000430328 WNT2P09544 360 aa13.73□□□□□ -0.21
RIF1-204ENST00000430328 MORN5Q5VZ52 161 aa13.73□□□□□ -0.21
RIF1-204ENST00000430328 TMEM158Q8WZ71 300 aa13.73□□□□□ -0.21
RIF1-204ENST00000430328 TRBV5-3A0A0A0MS03 114 aa13.72□□□□□ -0.21
RIF1-204ENST00000430328 BOD1L2Q8IYS8 172 aa13.72□□□□□ -0.21
RIF1-204ENST00000430328 TM2D1Q9BX74 207 aa13.72□□□□□ -0.21
RIF1-204ENST00000430328 DOCK4Q8N1I0 1966 aa13.72□□□□□ -0.21
RIF1-204ENST00000430328 DTX4Q9Y2E6 619 aa13.72□□□□□ -0.21
RIF1-204ENST00000430328 ZC2HC1BQ5TFG8 222 aa13.72□□□□□ -0.21
RIF1-204ENST00000430328 LCN12Q6JVE5 192 aa13.72□□□□□ -0.21
RIF1-204ENST00000430328 WFDC12Q8WWY7 111 aa13.72□□□□□ -0.21
RIF1-204ENST00000430328 WFDC9Q8NEX5 89 aa13.72□□□□□ -0.21
RIF1-204ENST00000430328 FHL5Q5TD97 284 aa13.72□□□□□ -0.21
RIF1-204ENST00000430328 SLC25A39Q9BZJ4 359 aaPredicted RBP13.72□□□□□ -0.21
RIF1-204ENST00000430328 J3QW42 95 aa13.72□□□□□ -0.21
RIF1-204ENST00000430328 C7orf69Q9H7B7 122 aa13.71□□□□□ -0.21
RIF1-204ENST00000430328 KLRD1Q13241 179 aa13.71□□□□□ -0.21
RIF1-204ENST00000430328 REPIN1Q9BWE0 567 aaKnown RBP13.71□□□□□ -0.21
RIF1-204ENST00000430328 DEPPQ9NTK1 212 aa13.71□□□□□ -0.21
RIF1-204ENST00000430328 CASP8AP2Q9UKL3 1982 aa13.71□□□□□ -0.21
RIF1-204ENST00000430328 C12orf77C9JDV5 145 aa13.71□□□□□ -0.21
RIF1-204ENST00000430328 CISD3P0C7P0 127 aa13.71□□□□□ -0.21
RIF1-204ENST00000430328 SEC61GP60059 68 aa13.71□□□□□ -0.21
RIF1-204ENST00000430328 PLA2G2FQ9BZM2 168 aa13.71□□□□□ -0.21
RIF1-204ENST00000430328 PLXNB1O43157 2135 aa13.71□□□□□ -0.21
RIF1-204ENST00000430328 ARHGAP21Q5T5U3 1957 aa13.71□□□□□ -0.21
RIF1-204ENST00000430328 CD55P08174 381 aa13.71□□□□□ -0.22
RIF1-204ENST00000430328 GAGE12HA6NDE8 117 aa13.71□□□□□ -0.22
RIF1-204ENST00000430328 PATJQ8NI35 1801 aa13.7□□□□□ -0.22
RIF1-204ENST00000430328 MUC4Q99102 2169 aa13.7□□□□□ -0.22
RIF1-204ENST00000430328 LINC00312Q9Y6C7 94 aa13.7□□□□□ -0.22
RIF1-204ENST00000430328 LHBP01229 141 aa13.7□□□□□ -0.22
RIF1-204ENST00000430328 SYNJ2BPP57105 145 aa13.7□□□□□ -0.22
RIF1-204ENST00000430328 RTBDNQ9BSG5 229 aaPredicted RBP13.7□□□□□ -0.22
RIF1-204ENST00000430328 CENPVL1A0A0U1RR11 272 aa13.7□□□□□ -0.22
RIF1-204ENST00000430328 FAM231BA6NCW3 169 aa13.7□□□□□ -0.22
RIF1-204ENST00000430328 IGHMP01871 453 aa13.7□□□□□ -0.22
RIF1-204ENST00000430328 FGF6P10767 208 aa13.7□□□□□ -0.22
RIF1-204ENST00000430328 ZNF362Q5T0B9 420 aaPredicted RBP13.7□□□□□ -0.22
RIF1-204ENST00000430328 MRPL27Q9P0M9 148 aaKnown RBP13.7□□□□□ -0.22
RIF1-204ENST00000430328 IGKV2-40A0A087WW87 121 aaPredicted RBP13.69□□□□□ -0.22
RIF1-204ENST00000430328 C9orf118A6NHY6 69 aa13.69□□□□□ -0.22
RIF1-204ENST00000430328 CRLF1O75462 422 aa13.69□□□□□ -0.22
RIF1-204ENST00000430328 IGKV2D-40P01614 121 aaPredicted RBP13.69□□□□□ -0.22
RIF1-204ENST00000430328 PRB4P10163 310 aaPredicted RBP13.69□□□□□ -0.22
RIF1-204ENST00000430328 CRYBA4P53673 196 aa13.69□□□□□ -0.22
RIF1-204ENST00000430328 ZNF319Q9P2F9 582 aa13.69□□□□□ -0.22
RIF1-204ENST00000430328 ITGB4P16144 1822 aa13.69□□□□□ -0.22
RIF1-204ENST00000430328 AZU1P20160 251 aa13.69□□□□□ -0.22
RIF1-204ENST00000430328 TAL2Q16559 108 aa13.69□□□□□ -0.22
RIF1-204ENST00000430328 LINC01465Q8N7H1 131 aa13.69□□□□□ -0.22
RIF1-204ENST00000430328 IGHG2P01859 326 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms