RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 SMIM12Q96EX1 92 aa10.91□□□□□ -0.66
THBS3-202ENST00000428962 GNB1LQ9BYB4 327 aa10.91□□□□□ -0.66
THBS3-202ENST00000428962 MRPL18Q9H0U6 180 aaKnown RBP10.91□□□□□ -0.66
THBS3-202ENST00000428962 RNASE7Q9H1E1 156 aaKnown RBP10.91□□□□□ -0.66
THBS3-202ENST00000428962 HIGD1AQ9Y241 93 aa10.91□□□□□ -0.66
THBS3-202ENST00000428962 OOSP1A8MZH6 123 aa10.9□□□□□ -0.66
THBS3-202ENST00000428962 NDUFA3O95167 84 aa10.9□□□□□ -0.66
THBS3-202ENST00000428962 CBLN1P23435 193 aa10.9□□□□□ -0.66
THBS3-202ENST00000428962 MYCNOSP40205 109 aa10.9□□□□□ -0.66
THBS3-202ENST00000428962 CX3CL1P78423 397 aa10.9□□□□□ -0.66
THBS3-202ENST00000428962 C19orf35Q6ZS72 473 aa10.9□□□□□ -0.66
THBS3-202ENST00000428962 CFHR4Q92496 578 aa10.9□□□□□ -0.66
THBS3-202ENST00000428962 RASL11BQ9BPW5 248 aa10.9□□□□□ -0.66
THBS3-202ENST00000428962 CHRDL1Q9BU40 450 aa10.9□□□□□ -0.66
THBS3-202ENST00000428962 HILPDAQ9Y5L2 63 aa10.9□□□□□ -0.66
THBS3-202ENST00000428962 IGHV3-21A0A0B4J1V1 117 aa10.89□□□□□ -0.67
THBS3-202ENST00000428962 I3L2K1 104 aa10.89□□□□□ -0.67
THBS3-202ENST00000428962 FCN1O00602 326 aa10.89□□□□□ -0.67
THBS3-202ENST00000428962 IGLC1P0CG04 106 aa10.89□□□□□ -0.67
THBS3-202ENST00000428962 UBE2G1P62253 170 aa10.89□□□□□ -0.67
THBS3-202ENST00000428962 FAM231DQ6ZW35 169 aa10.89□□□□□ -0.67
THBS3-202ENST00000428962 WNT10AQ9GZT5 417 aa10.89□□□□□ -0.67
THBS3-202ENST00000428962 SMIM27A0A1W2PRY6 76 aa10.88□□□□□ -0.67
THBS3-202ENST00000428962 ZNF705GA8MUZ8 300 aaPredicted RBP10.88□□□□□ -0.67
THBS3-202ENST00000428962 SNURFLB1AK76 121 aa10.88□□□□□ -0.67
THBS3-202ENST00000428962 SLC25A5P05141 298 aaKnown RBP10.88□□□□□ -0.67
THBS3-202ENST00000428962 NBEAP1P0C6P0 100 aa10.88□□□□□ -0.67
THBS3-202ENST00000428962 GP9P14770 177 aa10.88□□□□□ -0.67
THBS3-202ENST00000428962 IER3P46695 156 aa10.88□□□□□ -0.67
THBS3-202ENST00000428962 TMEM183BQ1AE95 376 aa10.88□□□□□ -0.67
THBS3-202ENST00000428962 LDLRAD2Q5SZI1 272 aa10.88□□□□□ -0.67
THBS3-202ENST00000428962 RUSC1-AS1Q66K80 236 aa10.88□□□□□ -0.67
THBS3-202ENST00000428962 BAGE2Q86Y30 109 aa10.88□□□□□ -0.67
THBS3-202ENST00000428962 SERTAD4Q9NUC0 356 aa10.88□□□□□ -0.67
THBS3-202ENST00000428962 EPDR1Q9UM22 224 aa10.88□□□□□ -0.67
THBS3-202ENST00000428962 LYZP61626 148 aa10.88□□□□□ -0.67
THBS3-202ENST00000428962 RANP62826 216 aaKnown RBP10.88□□□□□ -0.67
THBS3-202ENST00000428962 KLRD1Q13241 179 aa10.88□□□□□ -0.67
THBS3-202ENST00000428962 FXYD3Q14802 87 aa10.88□□□□□ -0.67
THBS3-202ENST00000428962 MINOS1Q5TGZ0 78 aa10.88□□□□□ -0.67
THBS3-202ENST00000428962 CDPF1Q6NVV7 123 aa10.88□□□□□ -0.67
THBS3-202ENST00000428962 C5orf17Q8NAS9 161 aa10.88□□□□□ -0.67
THBS3-202ENST00000428962 BLNKQ8WV28 456 aa10.88□□□□□ -0.67
THBS3-202ENST00000428962 PRDM13Q9H4Q3 707 aa10.88□□□□□ -0.67
THBS3-202ENST00000428962 TMEM14CQ9P0S9 112 aa10.88□□□□□ -0.67
THBS3-202ENST00000428962 MINOS1-NBL1R4GNA1 71 aa10.88□□□□□ -0.67
THBS3-202ENST00000428962 TSTD3H0UI37 97 aa10.87□□□□□ -0.67
THBS3-202ENST00000428962 PSG1P11464 419 aa10.87□□□□□ -0.67
THBS3-202ENST00000428962 CRISP2P16562 243 aa10.87□□□□□ -0.67
THBS3-202ENST00000428962 PKIAP61925 76 aa10.87□□□□□ -0.67
THBS3-202ENST00000428962 HES1Q14469 280 aa10.87□□□□□ -0.67
THBS3-202ENST00000428962 C5orf64Q2M2E5 130 aa10.87□□□□□ -0.67
THBS3-202ENST00000428962 FMC1Q96HJ9 113 aa10.87□□□□□ -0.67
THBS3-202ENST00000428962 ATG101Q9BSB4 218 aa10.87□□□□□ -0.67
THBS3-202ENST00000428962 BAHCC1Q9P281 2608 aa10.87□□□□□ -0.67
THBS3-202ENST00000428962 IZUMO1RA6ND01 250 aa10.86□□□□□ -0.67
THBS3-202ENST00000428962 PGPA6NDG6 321 aa10.86□□□□□ -0.67
THBS3-202ENST00000428962 AMY1AP04745 511 aa10.86□□□□□ -0.67
THBS3-202ENST00000428962 GZMBP10144 247 aa10.86□□□□□ -0.67
THBS3-202ENST00000428962 VMO1Q7Z5L0 202 aa10.86□□□□□ -0.67
THBS3-202ENST00000428962 LHFPL4Q7Z7J7 247 aa10.86□□□□□ -0.67
THBS3-202ENST00000428962 S100A7AQ86SG5 101 aa10.86□□□□□ -0.67
THBS3-202ENST00000428962 CMTM2Q8TAZ6 248 aa10.86□□□□□ -0.67
THBS3-202ENST00000428962 KLF12Q9Y4X4 402 aa10.86□□□□□ -0.67
THBS3-202ENST00000428962 ADGRG4Q8IZF6 3080 aa10.86□□□□□ -0.67
THBS3-202ENST00000428962 K7EIM0 57 aa10.86□□□□□ -0.67
THBS3-202ENST00000428962 HLA-DQA1P01909 254 aa10.86□□□□□ -0.67
THBS3-202ENST00000428962 RD3LP0DJH9 198 aa10.86□□□□□ -0.67
THBS3-202ENST00000428962 HIST1H1EP10412 219 aaKnown RBP10.86□□□□□ -0.67
THBS3-202ENST00000428962 GNG5P63218 68 aa10.86□□□□□ -0.67
THBS3-202ENST00000428962 RASL11AQ6T310 242 aa10.86□□□□□ -0.67
THBS3-202ENST00000428962 NHLRC2Q8NBF2 726 aa10.86□□□□□ -0.67
THBS3-202ENST00000428962 GRAMD2BQ96HH9 432 aa10.86□□□□□ -0.67
THBS3-202ENST00000428962 LINC00479Q96M42 142 aa10.86□□□□□ -0.67
THBS3-202ENST00000428962 SLC25A39Q9BZJ4 359 aaPredicted RBP10.86□□□□□ -0.67
THBS3-202ENST00000428962 NAT8BQ9UHF3 227 aa10.86□□□□□ -0.67
THBS3-202ENST00000428962 RNF24Q9Y225 148 aa10.86□□□□□ -0.67
THBS3-202ENST00000428962 TRAV34A0A0B4J273 112 aa10.85□□□□□ -0.67
THBS3-202ENST00000428962 A6NNC1 897 aa10.85□□□□□ -0.67
THBS3-202ENST00000428962 NPIPB5A8MRT5 1133 aa10.85□□□□□ -0.67
THBS3-202ENST00000428962 DEFA6Q01524 100 aa10.85□□□□□ -0.67
THBS3-202ENST00000428962 USF2Q15853 346 aaPredicted RBP10.85□□□□□ -0.67
THBS3-202ENST00000428962 TMEM68Q96MH6 324 aa10.85□□□□□ -0.67
THBS3-202ENST00000428962 GPR82Q96P67 336 aa10.85□□□□□ -0.67
THBS3-202ENST00000428962 RBM14Q96PK6 669 aaKnown RBP10.85□□□□□ -0.67
THBS3-202ENST00000428962 Q9H3A6 140 aa10.85□□□□□ -0.67
THBS3-202ENST00000428962 GSX1Q9H4S2 264 aaPredicted RBP10.85□□□□□ -0.67
THBS3-202ENST00000428962 TRAV30A0A087WSZ9 112 aa10.84□□□□□ -0.67
THBS3-202ENST00000428962 GRIFINA4D1Z8 144 aa10.84□□□□□ -0.67
THBS3-202ENST00000428962 TOMM40O96008 361 aa10.84□□□□□ -0.67
THBS3-202ENST00000428962 ESDP10768 282 aa10.84□□□□□ -0.67
THBS3-202ENST00000428962 HOXB4P17483 251 aaPredicted RBP10.84□□□□□ -0.67
THBS3-202ENST00000428962 TCL1AP56279 114 aa10.84□□□□□ -0.67
THBS3-202ENST00000428962 TPPP2P59282 170 aa10.84□□□□□ -0.67
THBS3-202ENST00000428962 PAFAH1B2P68402 229 aa10.84□□□□□ -0.67
THBS3-202ENST00000428962 Q0VG73 95 aa10.84□□□□□ -0.67
THBS3-202ENST00000428962 IQCJQ1A5X6 159 aa10.84□□□□□ -0.67
THBS3-202ENST00000428962 TMEM136Q6ZRR5 245 aa10.84□□□□□ -0.67
THBS3-202ENST00000428962 TMEM256Q8N2U0 113 aa10.84□□□□□ -0.67
THBS3-202ENST00000428962 ARPC1AQ92747 370 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms